Name: Aminipila terrae CBA3637
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 169770

Type strain:

Species: Aminipila terrae

Strain Designation: CBA3637

Culture col. no.: DSM 110662, KACC 21651

Strain history: <- S. W. Roh, World Institute of Kimchi, Gwangju, South Korea; CBA3637 <- S. W. Roh

NCBI tax ID(s): 2697030 (species)

SI-ID 404744

DSM 110662

Special Collections

DSMZ

Section

Aminipila terrae CBA3637 is an anaerobe bacterium that was isolated from freshwater sediment.

anaerobe
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	"Anaerovoracaceae"
	Genus	*Aminipila*
	Species	**Aminipila terrae**
	Full Scientific Name (LPSN)	Aminipila terrae Kim et al. 2022

Information on culture and growth conditions Culture and growth conditions

[Ref.: #69192]

Culture medium

PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c)

[Ref.: #69192]

Culture medium growth

[Ref.: #69192]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #69192]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

anaerobe Confidence in %94.645

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69192]	Sample type/isolated from	freshwater sediment
[Ref.: #69192]	Geographic location (country and/or sea, region)	Daejeon, Geum River
[Ref.: #69192]	Country	Republic of Korea
[Ref.: #69192]	Country ISO 3 Code	KOR
[Ref.: #69192]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Aminipila terrae CBA3637	GCA_010120715	complete	GenBank ENA	2697030 tax ID	*

[Ref.: #69192]

GC-content

36.7 mol%

sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Aminipila terrae CBA3637 NCBI: GCA_010120715.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	52.668	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	94.645	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	97.87	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	60.8	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	82.435	no
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	70.185	no

Availability in culture collections External links

[Ref.: #69192]

Culture collection no.

DSM 110662, KACC 21651

[Ref.: #115911]

SI-ID 404744

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aminipila terrae sp. nov., a strictly anaerobic bacterium isolated from river sediment.	Kim YB, Kim JY, Kim J, Song HS, Whon TW, Lee SH, Yoo S, Myoung J, Son HS, Roh SW	Arch Microbiol	10.1007/s00203-021-02301-x	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69192

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 110662

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#115911

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404744.1 )

* These data were automatically processed and therefore are not curated

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