Name: Rhabdothermus arcticus 2M70-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16735

Type strain:

Species: Rhabdothermus arcticus

Strain Designation: 2M70-1

Culture col. no.: DSM 22268, JCM 15963

Strain history: B. O. Steinsbu 2M70-1.

NCBI tax ID(s): 874266 (species)

SI-ID 403070

DSM 22268

Section

Rhabdothermus arcticus 2M70-1 is a thermophilic bacterium that was isolated from wall of an active high-temperature white smoker chimney.

thermophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Deinococcota*
	Class	*Deinococci*
	Order	*Thermales*
	Family	*Thermaceae*
	Genus	*Rhabdothermus*
	Species	**Rhabdothermus arcticus**
	Full Scientific Name (LPSN)	Rhabdothermus arcticus Steinsbu et al. 2011

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16245]

Culture medium

MEDIUM FOR STRAIN 2M70-1 (DSMZ Medium 1404)

[Ref.: #16245]

Culture medium growth

[Ref.: #16245]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16245]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #16245]			growth	65 °C
[Ref.: #67770]			growth	65 °C

[Ref.: #16245]	Temperature range	thermophilic
[Ref.: #67770]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-8

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16245]	Sample type/isolated from	wall of an active high-temperature white smoker chimney
[Ref.: #16245]	Geographic location (country and/or sea, region)	Norwegian–Greenland Sea, Mohns Ridge, northeast of Jan Mayen Island, Soria Moria vent field (71° 15.53' N 5° 48.73' W)
[Ref.: #16245]	Country	Norway
[Ref.: #16245]	Country ISO 3 Code	NOR
[Ref.: #16245]	Continent	Europe
[Ref.: #16245]	Geographic location	71.2588°/-5.8122°

[Ref.: #67770]	Sample type/isolated from	Wall of an active white smoker chimney collected in the Soria Moria vent field in the Norwegian-Greenland Sea
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Hydrothermal vent
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HM856631 (>99% sequence identity) for Rhabdothermus arcticus subclade from Microbeatlas

Aquatic Samples	16
Soil Samples	2
Animal Samples
Plant Samples
Total Samples	18

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16245]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16245]	Rhabdothermus arcticus strain 2M70-1 16S ribosomal RNA gene, partial sequence	HM856631	1472	ENA	874266 tax ID

[Ref.: #16245]

GC-content

68 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #16245]

Culture collection no.

DSM 22268, JCM 15963

[Ref.: #85753]

SI-ID 403070

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Rhabdothermus arcticus gen. nov., sp. nov., a member of the family Thermaceae isolated from a hydrothermal vent chimney in the Soria Moria vent field on the Arctic Mid-Ocean Ridge.	Steinsbu BO, Tindall BJ, Torsvik VL, Thorseth IH, Daae FL, Pedersen RB	Int J Syst Evol Microbiol	10.1099/ijs.0.027839-0	2010	*

References

#16245

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22268

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#85753

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403070.1 )

* These data were automatically processed and therefore are not curated

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