Name: Rhodanobacter sp. B2A1Ga4
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 166096

Type strain:

Species: Rhodanobacter sp.

Strain Designation: B2A1Ga4

Culture col. no.: UCCCB112

Strain history: Chung A.P. University of Coimbra

NCBI tax ID(s): 1883446 (species)

Special Collections

UCCCB

Other strains from Rhodanobacter sp.

Section

Rhodanobacter sp. B2A1Ga4 is a Gram-negative bacterium of the family Rhodanobacteraceae.

Gram-negative
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Lysobacterales*
	Family	*Rhodanobacteraceae*
	Genus	*Rhodanobacter*
	Full Scientific Name (LPSN)	Rhodanobacter Nalin et al. 1999

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %98.494

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67772]			optimum	25 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67772]	Country	Portugal
[Ref.: #67772]	Country ISO 3 Code	PRT
[Ref.: #67772]	Continent	Europe
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Rhodanobacter sp. B2A1Ga4	2778647.3	wgs	PATRIC	2778647 tax ID	*
[Ref.: #66792]	Rhodanobacter sp. B2A1Ga4	GCA_018101315	contig	GenBank ENA	2778647 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Rhodanobacter sp. B2A1Ga4 PATRIC: 2778647.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	98.494	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	97.246	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	89.914	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	82.873	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	95.761	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	64.118	no

Availability in culture collections External links

[Ref.: #67772]

Culture collection no.

UCCCB112

Literature:

	Title	Authors	Journal	DOI	Year
Biotechnology	Genome mining to unravel potential metabolic pathways linked to gallium bioleaching ability of bacterial mine isolates.	Chung AP, Francisco R, Morais PV, Branco R	Front Microbiol	10.3389/fmicb.2022.970147	2022	*
	A DedA Family Membrane Protein in Indium Extrusion in Rhodanobacter sp. B2A1Ga4.	Caldeira JB, Chung AP, Piedade AP, Morais PV, Branco R	Front Microbiol	10.3389/fmicb.2021.772127	2021	*
	Relevance of FeoAB system in Rhodanobacter sp. B2A1Ga4 resistance to heavy metals, aluminium, gallium, and indium.	Caldeira JB, Chung AP, Morais PV, Branco R	Appl Microbiol Biotechnol	10.1007/s00253-021-11254-6	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67772 The University of Coimbra Bacteria Culture Collection (UCCCB) ; Curators of the UCCCB;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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