Streptomyces rubrus (DSM 42030, NBRC 105046, Sp080513KE-34)

Name: Streptomyces rubrus (DSM 42030, NBRC 105046, Sp080513KE-34)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16483

Type strain

Strain Designation Sp080513KE-34

Culture col. no. DSM 42030 NBRC 105046 Sp080513KE-34

NCBI tax ID(s) 565074

Special Collections DSMZ

History DSMZ <- T. Tamura, NBRC; NBRC 105046 <- S. T. Khan; Sp080513KE-34

Links

Streptomyces rubrus Sp080513KE-34 is a bacterium that was isolated from marine sponge, Haliclona sp..

16S sequence Bacteria

Name and taxonomic classification

SI-ID 400245

NBRC 105046,DSM 42030

@ref 20215

Last LPSN update 2026-05-29 08:28:47

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces rubrus

Full scientific name Streptomyces rubrus corrig. Khan et al. 2011

Synonyms (1)

Streptomyces rubrum

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
17546	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
17546	positive	growth	28

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Host	#Invertebrates (Other)	#Porifera (Sponges)

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
17546	marine sponge, Haliclona sp.	Haliclona	Chiba, Tateyama	Japan	JPN	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
17546	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
17546	Streptomyces rubrus gene for 16S rRNA, partial sequence	AB473557	1475		565074

GC content

@ref	GC-content (mol%)	Method
17546	75	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

References

#17546	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 42030
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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