Name: Streptomyces rubrus Sp080513KE-34
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16483

Type strain:

Species: Streptomyces rubrus

Strain Designation: Sp080513KE-34

Culture col. no.: DSM 42030, NBRC 105046

Strain history: <- T. Tamura, NBRC; NBRC 105046 <- S. T. Khan; Sp080513KE-34

NCBI tax ID(s): 565074 (species)

SI-ID 400245

DSM 42030

Section

Streptomyces rubrus Sp080513KE-34 is a mesophilic bacterium that was isolated from marine sponge, Haliclona sp..

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces rubrus**
	Full Scientific Name (LPSN)	Streptomyces rubrus corrig. Khan et al. 2011

Synonym

Streptomyces rubrum

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17546]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #17546]

Culture medium growth

[Ref.: #17546]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17546]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #17546]			growth	28 °C

[Ref.: #17546]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17546]	Sample type/isolated from	marine sponge, Haliclona sp.
[Ref.: #17546]	Host species	Haliclona
[Ref.: #17546]	Geographic location (country and/or sea, region)	Chiba, Tateyama
[Ref.: #17546]	Country	Japan
[Ref.: #17546]	Country ISO 3 Code	JPN
[Ref.: #17546]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Host	#Invertebrates (Other)	#Porifera (Sponges)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17546]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17546]	Streptomyces rubrus gene for 16S rRNA, partial sequence	AB473557	1475	ENA	565074 tax ID

[Ref.: #17546]

GC-content

75 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #17546]

Culture collection no.

DSM 42030, NBRC 105046

[Ref.: #85518]

SI-ID 400245

References

#17546

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 42030

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#85518

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400245.1 )

* These data were automatically processed and therefore are not curated

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