Streptomyces kunmingensis DSM 41681 is a spore-forming, mesophilic prokaryote that builds an aerial mycelium and was isolated from soil.
spore-forming mesophilic genome sequence 16S sequence| @ref 20215 |
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Last LPSN update
2025-12-16 09:50:49 |
| Domain Bacillati |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Kitasatosporales |
| Family Streptomycetaceae |
| Genus Streptomyces |
| Species Streptomyces kunmingensis |
| Full scientific name Streptomyces kunmingensis (Ruan et al. 1985) Goodfellow et al. 1986 |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 10464 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive  | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 19522 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 19522 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 19522 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 19522 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 19522 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 19522 | ISP 7 | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes |
| @ref | Spore description | Type of spore | Spore formation | |
|---|---|---|---|---|
| 19522 | Formation of spore chains: spirales, spore surface: smooth | spore |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 19522 | NaCl | positive | maximum | 5 % |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 19522 | 22599 ChEBI | arabinose | + | ||
| 68368 | 29016 ChEBI | arginine | + | hydrolysis | from API 20E |
| 19522 | 62968 ChEBI | cellulose | - | ||
| 68368 | 16947 ChEBI | citrate | + | assimilation | from API 20E |
| 19522 | 28757 ChEBI | fructose | + | ||
| 68368 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20E |
| 19522 | 17234 ChEBI | glucose | + | ||
| 68368 | 25094 ChEBI | lysine | + | degradation | from API 20E |
| 19522 | 29864 ChEBI | mannitol | + | ||
| 19522 | 17268 ChEBI | myo-inositol | - | ||
| 68368 | 18257 ChEBI | ornithine | + | degradation | from API 20E |
| 19522 | 16634 ChEBI | raffinose | - | ||
| 19522 | 26546 ChEBI | rhamnose | + | ||
| 19522 | 17992 ChEBI | sucrose | - | ||
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | + | hydrolysis | from API 20E |
| 19522 | 18222 ChEBI | xylose | - |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68368 | arginine dihydrolase | + | 3.5.3.6 | from API 20E |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68368 | gelatinase | + | from API 20E | |
| 68368 | lysine decarboxylase | + | 4.1.1.18 | from API 20E |
| 68368 | ornithine decarboxylase | + | 4.1.1.17 | from API 20E |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 68368 | urease | + | 3.5.1.5 | from API 20E |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 124043 | ASM3953353v1 assembly for Streptomyces kunmingensis JCM 7473 | scaffold | GCA_039533535   | 68225 | 49.75 | | |
| 124043 | ASM3561610v1 assembly for Streptomyces kunmingensis DSM 41681 | contig | GCA_035616105 | 68225.7  | 68225 | 0.53 | |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Streptomyces kunmingensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 7473 | D44441 | 120 | | 68225 | |
| 20218 | Streptomyces kunmingensis gene for 16S rRNA, partial sequence, strain: NBRC 14463 | AB184597 | 1454 |  | 68225 | |
| 20218 | Streptomyces kunmingensis strain NRRL B-16240T 16S ribosomal RNA gene, partial sequence | DQ442513 | 1487 | | 68225 | |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 67770 | 71.3 | thermal denaturation, midpoint method (Tm) |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Streptomyces tabacisoli sp. nov, isolated from the rhizosphere soil of Nicotiana tabacum. | Li K, Zhang H, Qian Y, Mo P, Deng A, Gao J, Liang W. | J Antibiot (Tokyo) | 10.1038/s41429-024-00802-7 | 2025 | |
| Isolation of aerobic cultivable cellulolytic bacteria from different regions of the gastrointestinal tract of giant land snail Achatina fulica. | Pinheiro GL, Correa RF, Cunha RS, Cardoso AM, Chaia C, Clementino MM, Garcia ES, de Souza W, Frases S. | Front Microbiol | 10.3389/fmicb.2015.00860 | 2015 | | |
| Production, Purification, and Characterization of beta-(1-4)-Endoxylanase of Streptomyces roseiscleroticus. | Grabski AC, Jeffries TW. | Appl Environ Microbiol | 10.1128/aem.57.4.987-992.1991 | 1991 | | |
| Multifunctional metabolites of Streptomyces kunmingensis BS19 from bamboo rhizosphere soil. | Sangeetha M, Sasirekha S, Mahendran J, Sivarajan A, Radhakrishnan M, Manigundan K, Dastager SG, Sengottuvelu S, Balagurunathan R. | Int Microbiol | 10.1007/s10123-024-00619-2 | 2025 | | |
| Biosequestration of carbon dioxide using carbonic anhydrase from novel Streptomyces kunmingensis. | Sangeetha M, Sivarajan A, Radhakrishnan M, Siddharthan N, Balagurunathan R. | Arch Microbiol | 10.1007/s00203-022-02887-w | 2022 | | |
| Characterisation of bacteria isolated from the stingless bee, Heterotrigona itama, honey, bee bread and propolis. | Ngalimat MS, Raja Abd Rahman RNZ, Yusof MT, Syahir A, Sabri S. | PeerJ | 10.7717/peerj.7478 | 2019 | | |
| Phylogeny | Metabolic Comparison and Molecular Networking of Antimicrobials in Streptomyces Species. | Thapa BB, Huo C, Budhathoki R, Chaudhary P, Joshi S, Poudel PB, Magar RT, Parajuli N, Kim KH, Sohng JK. | Int J Mol Sci | 10.3390/ijms25084193 | 2024 | |
| Metabolism | Phytate degradation by fungi and bacteria that inhabit sawdust and coffee residue composts. | Fathallh Eida M, Nagaoka T, Wasaki J, Kouno K. | Microbes Environ | 10.1264/jsme2.me12083 | 2013 | |
| Streptomyces beihaiensis sp. nov., a chitin-degrading actinobacterium, isolated from shrimp pond soil. | Xie J, Zhang H, Xu X, Li S, Jiang M, Jiang Y, Shen N. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005857 | 2023 | | |
| Phylogeny | Streptomyces citrinus sp. nov., with yellow diffusible pigment. | He Y, Yang E, Xu J, Sun Y, Sun L. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.006745 | 2025 | |
| Phylogeny | Streptomyces fractus sp. nov., a novel streptomycete isolated from the gut of a South African termite. | Rohland J, Meyers PR | Antonie Van Leeuwenhoek | 10.1007/s10482-015-0404-8 | 2015 | |
| Phylogeny | Streptomyces qaidamensis sp. nov., isolated from sand in the Qaidam Basin, China. | Zhang B, Tang S, Chen X, Zhang G, Zhang W, Chen T, Liu G, Li S, Dos Santos LT, Castro HC, Facey P, Hitchings M, Dyson P | J Antibiot (Tokyo) | 10.1038/s41429-018-0080-9 | 2018 | |
| Phylogeny | Streptomyces endophyticus sp. nov., an endophytic actinomycete isolated from Artemisia annua L. | Li J, Zhao GZ, Zhu WY, Huang HY, Xu LH, Zhang S, Li WJ | Int J Syst Evol Microbiol | 10.1099/ijs.0.035725-0 | 2012 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive16325.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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