Name: Streptomyces kunmingensis DSM 41681
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 16325

Type strain:

Species: Streptomyces kunmingensis

Culture col. no.: DSM 41681, ATCC 35682, IFO 14463, JCM 7473, NBRC 14463, CGMCC 4.1151, NRRL B-16240, VKM Ac-895

Strain history: IFO 14463 <-- IMRU <-- J. Ruan 80-3024.

NCBI tax ID(s): 68225 (species)

SI-ID 41225

ATCC 35682, DSM 41681, IFO 14463, JCM 7473, NRRL B-16240, NBRC 14463, CGMCC 4.1151, VKM Ac-895

Special Collections

Section

Streptomyces kunmingensis DSM 41681 is a spore-forming bacterium that builds an aerial mycelium and was isolated from soil.

spore-forming
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces kunmingensis**
	Full Scientific Name (LPSN)	Streptomyces kunmingensis (Ruan et al. 1985) Goodfellow et al. 1986

Synonym

Chainia kunmingensis

Information on morphological and physiological properties Morphology

[Ref.: #19522]	Colony color	Brown
[Ref.: #19522]	Incubation period	10-14 days
[Ref.: #19522]	Cultivation medium used	ISP 2

[Ref.: #19522]	Colony color	Beige
[Ref.: #19522]	Incubation period	10-14 days
[Ref.: #19522]	Cultivation medium used	ISP 3

[Ref.: #19522]	Colony color	Red
[Ref.: #19522]	Incubation period	10-14 days
[Ref.: #19522]	Cultivation medium used	ISP 4

[Ref.: #19522]	Colony color	Brown
[Ref.: #19522]	Incubation period	10-14 days
[Ref.: #19522]	Cultivation medium used	ISP 5

[Ref.: #19522]	Colony color	Beige
[Ref.: #19522]	Incubation period	10-14 days
[Ref.: #19522]	Cultivation medium used	ISP 6

[Ref.: #19522]	Colony color	Brown
[Ref.: #19522]	Incubation period	10-14 days
[Ref.: #19522]	Cultivation medium used	ISP 7

[Ref.: #19522]	Multicellular complex forming ability	yes
[Ref.: #19522]	Multicellular complex name	Aerial Mycelium
[Ref.: #19522]	Multicellular complex color	White
[Ref.: #19522]	Medium Name (multicellularity)	ISP 2

[Ref.: #19522]	Multicellular complex forming ability	yes
[Ref.: #19522]	Multicellular complex name	Aerial Mycelium
[Ref.: #19522]	Multicellular complex color	Brown
[Ref.: #19522]	Medium Name (multicellularity)	ISP 3

[Ref.: #19522]	Multicellular complex forming ability	yes
[Ref.: #19522]	Multicellular complex name	Aerial Mycelium
[Ref.: #19522]	Multicellular complex color	White
[Ref.: #19522]	Medium Name (multicellularity)	ISP 4

[Ref.: #19522]	Multicellular complex forming ability	yes
[Ref.: #19522]	Multicellular complex name	Aerial Mycelium
[Ref.: #19522]	Multicellular complex color	White
[Ref.: #19522]	Medium Name (multicellularity)	ISP 5

[Ref.: #19522]	Multicellular complex forming ability	no
[Ref.: #19522]	Medium Name (multicellularity)	ISP 6

[Ref.: #19522]	Multicellular complex forming ability	yes
[Ref.: #19522]	Multicellular complex name	Aerial Mycelium
[Ref.: #19522]	Multicellular complex color	White
[Ref.: #19522]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

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Culture medium

ISP 2

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 3

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 4

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 5

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 6

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Culture medium growth

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Culture medium composition

expand / minimize

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Culture medium

ISP 7

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Culture medium growth

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Culture medium composition

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		Temperature
[Ref.: #10464]	growth	28 °C
[Ref.: #19522]	optimum	28 °C
[Ref.: #67770]	growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #19522]	Spore description	Formation of spore chains: spirales, spore surface: smooth
[Ref.: #19522]	Type of spore	spore
[Ref.: #19522]	Ability of spore formation	yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #19522]		NaCl		maximum	5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #19522]	arabinose ChEBI	+
[Ref.: #68368]	arginine ChEBI	+	hydrolysis	* from API 20E
[Ref.: #19522]	cellulose ChEBI	-
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #19522]	fructose ChEBI	+
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #19522]	glucose ChEBI	+
[Ref.: #68368]	lysine ChEBI	+	degradation	* from API 20E
[Ref.: #19522]	mannitol ChEBI	+
[Ref.: #19522]	myo-inositol ChEBI	-
[Ref.: #68368]	ornithine ChEBI	+	degradation	* from API 20E
[Ref.: #19522]	raffinose ChEBI	-
[Ref.: #19522]	rhamnose ChEBI	+
[Ref.: #19522]	sucrose ChEBI	-
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	+	hydrolysis	* from API 20E
[Ref.: #19522]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	+		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68368]	arginine dihydrolase	+	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #68368]	lysine decarboxylase	+	4.1.1.18	* from API 20E
[Ref.: #68368]	ornithine decarboxylase	+	4.1.1.17	* from API 20E
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	+	3.5.1.5	* from API 20E

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19522]	379	+	+	+	+	+	-	+	-	-	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10464]	Sample type/isolated from	soil
[Ref.: #10464]	Geographic location (country and/or sea, region)	Kunming, Dagyanlow's Lake
[Ref.: #10464]	Country	China
[Ref.: #10464]	Country ISO 3 Code	CHN
[Ref.: #10464]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #10464]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19522]	Biosafety level	1	risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces kunmingensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 7473	D44441	120	GenBank ENA	68225 tax ID	*
[Ref.: #20218]	Streptomyces kunmingensis gene for 16S rRNA, partial sequence, strain: NBRC 14463	AB184597	1454	GenBank ENA	68225 tax ID	*
[Ref.: #20218]	Streptomyces kunmingensis strain NRRL B-16240T 16S ribosomal RNA gene, partial sequence	DQ442513	1487	GenBank ENA	68225 tax ID	*

[Ref.: #67770]

GC-content

71.3 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #10464]

Culture collection no.

DSM 41681, ATCC 35682, IFO 14463, JCM 7473, NBRC 14463, CGMCC 4.1151, NRRL B-16240, VKM Ac-895

[Ref.: #85381]

SI-ID 41225

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces fractus sp. nov., a novel streptomycete isolated from the gut of a South African termite.	Rohland J, Meyers PR	Antonie Van Leeuwenhoek	10.1007/s10482-015-0404-8	2015	*
Phylogeny	Streptomyces qaidamensis sp. nov., isolated from sand in the Qaidam Basin, China.	Zhang B, Tang S, Chen X, Zhang G, Zhang W, Chen T, Liu G, Li S, Dos Santos LT, Castro HC, Facey P, Hitchings M, Dyson P	J Antibiot (Tokyo)	10.1038/s41429-018-0080-9	2018	*
Phylogeny	Streptomyces endophyticus sp. nov., an endophytic actinomycete isolated from Artemisia annua L.	Li J, Zhao GZ, Zhu WY, Huang HY, Xu LH, Zhang S, Li WJ	Int J Syst Evol Microbiol	10.1099/ijs.0.035725-0	2012	*

References

#10464

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 41681

#19522

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#85381

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID41225.1 )

* These data were automatically processed and therefore are not curated

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