Streptomyces angustmyceticus DSM 41683 is an obligate aerobe, spore-forming, Gram-positive bacterium that builds an aerial mycelium and produces antibiotic compounds.
antibiotic compound production spore-forming Gram-positive filament-shaped obligate aerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Kitasatosporales |
| Family Streptomycetaceae |
| Genus Streptomyces |
| Species Streptomyces angustmyceticus |
| Full scientific name Streptomyces angustmyceticus (Yüntsen et al. 1956) Kumar and Goodfellow 2010 |
| Synonyms (1) |
| @ref: | 10466 |
| multimedia content: | DSM_41683.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_41683.jpg |
| caption: | Medium 65 28°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 10466 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 18709 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 18709 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 18709 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 18709 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 18709 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 18709 | ISP 7 | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 37736 | MEDIUM 128 - for Nocardia brevicatena, Nocardia flavorosea subsp. fusca and Streptomyces ambofaciens | Distilled water make up to (1000.000 ml);Maltose (10.000 g);Agar (20.000g);Yeast extract (1.000 g);Beef extract (1.000 g);Casamino acids (2.000 g) | |||
| 10466 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | Medium recipe at MediaDive | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water | ||
| 10466 | STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) | Medium recipe at MediaDive | Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water | ||
| 116388 | CIP Medium 129 | Medium recipe at CIP |
| @ref | Ability | Type | PH | PH range | |
|---|---|---|---|---|---|
| 29391 | positive | growth | 09-10 | alkaliphile |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 29391 | 17057 ChEBI | cellobiose | + | carbon source | |
| 29391 | 23652 ChEBI | dextrin | + | carbon source | |
| 116388 | 4853 ChEBI | esculin | - | hydrolysis | |
| 29391 | 28757 ChEBI | fructose | + | carbon source | |
| 29391 | 28260 ChEBI | galactose | + | carbon source | |
| 29391 | 29987 ChEBI | glutamate | + | carbon source | |
| 29391 | 28087 ChEBI | glycogen | + | carbon source | |
| 116388 | 606565 ChEBI | hippurate | - | hydrolysis | |
| 29391 | 18403 ChEBI | L-arabitol | + | carbon source | |
| 29391 | 25017 ChEBI | leucine | + | carbon source | |
| 116388 | 17632 ChEBI | nitrate | - | reduction | |
| 116388 | 17632 ChEBI | nitrate | - | respiration | |
| 116388 | 16301 ChEBI | nitrite | - | reduction | |
| 29391 | 26271 ChEBI | proline | + | carbon source | |
| 29391 | 16634 ChEBI | raffinose | + | carbon source | |
| 29391 | 30911 ChEBI | sorbitol | + | carbon source |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 116388 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 116388 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | + | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | + | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | + | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 116388 | amylase | + | ||
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 116388 | beta-galactosidase | + | 3.2.1.23 | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 116388 | caseinase | + | 3.4.21.50 | |
| 116388 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 116388 | DNase | - | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 116388 | gamma-glutamyltransferase | + | 2.3.2.2 | |
| 116388 | gelatinase | +/- | ||
| 116388 | lecithinase | + | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 116388 | lipase | + | ||
| 68382 | lipase (C 14) | + | from API zym | |
| 116388 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 116388 | ornithine decarboxylase | - | 4.1.1.17 | |
| 116388 | oxidase | - | ||
| 116388 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 116388 | tryptophan deaminase | - | ||
| 116388 | tween esterase | + | ||
| 116388 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | + | from API zym |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM1993323v1 assembly for Streptomyces angustmyceticus JCM 4053 | complete | 285578 | 98.66 | ||||
| 66792 | Streptomyces angustmyceticus strain JCM 4053 | complete | 285578 | 97.75 | ||||
| 66792 | Streptomyces angustmyceticus strain JCM 4053 | complete | 285578 | 97.75 | ||||
| 66792 | Streptomyces angustmyceticus strain JCM 4053 | complete | 285578 | 97.75 | ||||
| 66792 | Streptomyces angustmyceticus strain JCM 4053 | complete | 285578 | 97.75 | ||||
| 66792 | ASM917626v1 assembly for Streptomyces angustmyceticus NBRC 3934 | scaffold | 285578 | 63.59 | ||||
| 67770 | ASM215441v1 assembly for Streptomyces angustmyceticus NRRL B-2347 | scaffold | 285578 | 0 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Streptomyces angustmyceticus gene for 16S rRNA, partial sequence, strain: NBRC 3934 | AB184817 | 1477 | 285578 | ||
| 20218 | Streptomyces angustmyceticus strain NRRL B-2347 16S ribosomal RNA gene, partial sequence | DQ442509 | 1489 | 285578 | ||
| 10466 | Streptomyces angustmyceticus strain NRRL B-2347 16S ribosomal RNA gene, partial sequence | EU170119 | 1449 | 285578 | ||
| 124043 | Streptomyces angustmyceticus strain CGMCC 4.1918 16S ribosomal RNA gene, partial sequence. | HQ244457 | 1380 | 285578 |
| 10466 | GC-content (mol%)70.2 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 98.22 | no |
| 125439 | motility | BacteriaNetⓘ | no | 93.83 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 98.79 | no |
| 125439 | spore_formation | BacteriaNetⓘ | yes | 88.69 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 88.57 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 98.02 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 92.13 | no |
| 125438 | spore-forming | spore-formingⓘ | yes | 93.24 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 97.50 | no |
| 125438 | flagellated | motile2+ⓘ | no | 88.10 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Preparation of nucleoside analogues: opportunities for innovation at the interface of synthetic chemistry and biocatalysis. | Salihovic A, Taladriz-Sender A, Burley GA. | Chem Sci | 10.1039/d5sc03026a | 2025 | ||
| Efficient biosynthesis of nucleoside cytokinin angustmycin A containing an unusual sugar system. | Yu L, Zhou W, She Y, Ma H, Cai YS, Jiang M, Deng Z, Price NPJ, Chen W. | Nat Commun | 10.1038/s41467-021-26928-y | 2021 | ||
| Metabolism | ScnR1-Mediated Competitive DNA Binding and Feedback Inhibition Regulate Guvermectin Biosynthesis in Streptomyces caniferus. | Shi H, Wang J, Zhang X, Zhou N, Wang X, Xiang W, Li S, Zhang Y. | Biology (Basel) | 10.3390/biology14070813 | 2025 | |
| Coordinated regulation of two LacI family regulators, GvmR and GvmR2, on guvermectin production in Streptomyces caniferus. | Shi H, Wang J, Li S, Liu C, Li L, Dong Z, Ye L, Wang X, Zhang Y, Xiang W. | Synth Syst Biotechnol | 10.1016/j.synbio.2024.11.001 | 2025 | ||
| Metabolism | Identification, Cloning and Heterologous Expression of the Gene Cluster Directing RES-701-3, -4 Lasso Peptides Biosynthesis from a Marine Streptomyces Strain. | Oves-Costales D, Sanchez-Hidalgo M, Martin J, Genilloud O. | Mar Drugs | 10.3390/md18050238 | 2020 | |
| Metabolism | Characterization of the biosynthetic gene cluster for cryptic phthoxazolin A in Streptomyces avermitilis. | Suroto DA, Kitani S, Arai M, Ikeda H, Nihira T. | PLoS One | 10.1371/journal.pone.0190973 | 2018 | |
| Phylogeny | Description of Streptomyces explomaris sp. nov., isolated from the coastal soil rhizosphere of Juniperus excelsa and reclassification of Streptomyces libani as a later heterotypic synonym of Streptomyces nigrescens. | Shu W, Ruckert-Reed C, Gromyko O, Tistechok S, Kalinowski J, Luzhetskyy A, Wittmann C. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.006711 | 2025 | |
| Genomic and Phenotypic Characterization of Streptomyces sirii sp. nov., Amicetin-Producing Actinobacteria Isolated from Bamboo Rhizospheric Soil. | Zakalyukina YV, Alferova VA, Nikandrova AA, Kiriy AR, Chernyshova AP, Kabilov MR, Baturina OA, Biryukov MV, Sergiev PV, Lukianov DA. | Microorganisms | 10.3390/microorganisms12122628 | 2024 | ||
| Phylogeny | Streptomyces lydicamycinicus sp. nov. and Its Secondary Metabolite Biosynthetic Gene Clusters for Polyketide and Nonribosomal Peptide Compounds. | Komaki H, Hosoyama A, Igarashi Y, Tamura T | Microorganisms | 10.3390/microorganisms8030370 | 2020 | |
| Phylogeny | Reclassification of Streptomyces hygroscopicus strains as Streptomyces aldersoniae sp. nov., Streptomyces angustmyceticus sp. nov., comb. nov., Streptomyces ascomycinicus sp. nov., Streptomyces decoyicus sp. nov., comb. nov., Streptomyces milbemycinicus sp. nov. and Streptomyces wellingtoniae sp. nov. | Kumar Y, Goodfellow M | Int J Syst Evol Microbiol | 10.1099/ijs.0.012161-0 | 2009 |
| #10466 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 41683 |
| #18709 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #25798 | IJSEM 769 2010 ( DOI 10.1099/ijs.0.012161-0 , PubMed 19656929 ) |
| #29391 | Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25798 |
| #37736 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68382 | Automatically annotated from API zym . |
| #116388 | Collection of Institut Pasteur ; Curators of the CIP; CIP 106838 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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