Name: Myxococcus stipitatus JCM 21004
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 163057

Type strain:

Species: Myxococcus stipitatus

Culture col. no.: JCM 21004, AJ 12377, IAM 13956, NBRC 100069

Strain history: IAM 13956 <-- S. Yamanaka No. 21 (=AJ 12377).

NCBI tax ID(s): 83455 (species)

SI-ID 200043

NBRC 100069, IAM 13956, JCM 21004

Special Collections

Other strains from Myxococcus stipitatus

Section

Myxococcus stipitatus JCM 21004 is a bacterium that was isolated from Riverside soil.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Deltaproteobacteria*
	Order	*Myxococcales*
	Family	*Myxococcaceae*
	Genus	*Myxococcus*
	Species	**Myxococcus stipitatus**
	Full Scientific Name (LPSN)	Myxococcus stipitatus Thaxter 1897 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Riverside soil
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB218208 (>99% sequence identity) for Myxococcus from Microbeatlas

Aquatic Samples	133
Soil Samples	976
Animal Samples	96
Plant Samples	173
Total Samples	1378

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Myxococcus stipitatus gene for 16S rRNA, partial sequence, strain: NBRC 100069	AB218208	1461	GenBank ENA	83455 tax ID
[Ref.: #124043]	Myxococcus stipitatus gene for 16S-23S rRNA internal transcribed spacer regions, partial sequence, strain: NBRC 100069.	AB218238	733	GenBank ENA	83455 tax ID	*

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 21004, AJ 12377, IAM 13956, NBRC 100069

[Ref.: #113825]

SI-ID 200043

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#113825

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID200043.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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