Name: Pseudomaricurvus alkylphenolicus JCM 19135
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 162407

Type strain:

Species: Pseudomaricurvus alkylphenolicus

Culture col. no.: JCM 19135, KCTC 32386

Strain history: H. Iwaki KU41G.

NCBI tax ID(s): 1306991 (species)

Special Collections

JCM
KCTC

Section

Pseudomaricurvus alkylphenolicus JCM 19135 is a Gram-negative bacterium that was isolated from Seawater from the coastal region of Chichi-jima Island of Ogasawara Islands.

Gram-negative
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Cellvibrionales*
	Family	*Cellvibrionaceae*
	Genus	*Pseudomaricurvus*
	Species	**Pseudomaricurvus alkylphenolicus**
	Full Scientific Name (LPSN)	Pseudomaricurvus alkylphenolicus Iwaki et al. 2014

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %98.75

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	25 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]

Ability of spore formation

no Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Seawater from the coastal region of Chichi-jima Island of Ogasawara Islands
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Pseudomaricurvus alkylphenolicus gene for 16S ribosomal RNA, partial sequence	AB809161	1458	GenBank ENA	1306991 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Pseudomaricurvus alkylphenolicus KCTC 32386	GCA_011683955	contig	GenBank ENA	1306991 tax ID
[Ref.: #66792]	Pseudomaricurvus alkylphenolicus strain KCTC 32386	1306991.3	wgs	PATRIC	1306991 tax ID	*
[Ref.: #66792]	Pseudomaricurvus alkylphenolicus KCTC 32386	2887179270	draft	JGI IMG/M	1306991 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Pseudomaricurvus alkylphenolicus strain KCTC 32386 PATRIC: 1306991.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pseudomaricurvus alkylphenolicus strain KCTC 32386 PATRIC: 1306991.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	98.75	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	91.851	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	88.948	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	78.744	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	96.5	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	79.986	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 19135, KCTC 32386

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Isolation and characterization of marine nonylphenol-degrading bacteria and description of Pseudomaricurvus alkylphenolicus gen. nov., sp. nov.	Iwaki H, Fujioka M, Hasegawa Y	Curr Microbiol	10.1007/s00284-013-0455-x	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Pseudomaricurvus alkylphenolicus strain KCTC 32386

Pseudomaricurvus alkylphenolicus strain KCTC 32386

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