Name: Corallincola platygyrae JCM 18796
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 162297

Type strain:

Species: Corallincola platygyrae

Culture col. no.: JCM 18796, CGMCC 1.10992

Strain history: Y. Fu JLT2006.

NCBI tax ID(s): 1193278 (species)

Special Collections

Section

Corallincola platygyrae JCM 18796 is a bacterium that was isolated from Coral Platygyra carnosus at Moon Island inside the Hoi Ha Wan Marine Park.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Psychromonadaceae*
	Genus	*Corallincola*
	Species	**Corallincola platygyrae**
	Full Scientific Name (LPSN)	Corallincola platygyrae Li et al. 2017

Synonym

"Coralslurrinella hongkonensis"

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	20 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Coral Platygyra carnosus at Moon Island inside the Hoi Ha Wan Marine Park
[Ref.: #67770]	Host species	Platygyra carnosus
[Ref.: #67770]	Geographic location (country and/or sea, region)	Hong Kong
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence JN169121 (>99% sequence identity) for Corallincola platygyrae subclade from Microbeatlas

Aquatic Samples	113
Soil Samples	2
Animal Samples	23
Plant Samples	5
Total Samples	143

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Corallincola platygyrae strain JLT2006 16S ribosomal RNA gene, partial sequence	JN169121	1469	GenBank ENA	1193278 tax ID

[Ref.: #67770]

GC-content

40.3 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 18796, CGMCC 1.10992

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Corallincola luteus sp. nov., a marine bacterium isolated from surface sediment of Bohai Sea of China.	Ren Q, Yang X, Yu M, Tian X, Li B, Meng Z, Wu Y, Liu J, Zhang XH	Antonie Van Leeuwenhoek	10.1007/s10482-019-01295-3	2019	*
Phylogeny	Coralslurrinella hongkonensis gen. nov., sp. nov., a novel bacterium in the family Psychromonadaceae, isolated from the coral Platygyra carnosus.	Li Y, Chan Y, Fu Y, Zhang R, Chiu JM	Antonie Van Leeuwenhoek	10.1007/s10482-013-0017-z	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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