Name: Algoriella xinjiangensis JCM 16590
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 161828

Type strain:

Species: Algoriella xinjiangensis

Culture col. no.: JCM 16590, CGMCC 1.10229

Strain history: L. Zhang XJ109.

NCBI tax ID(s): 684065 (species)

Special Collections

Section

Algoriella xinjiangensis JCM 16590 is a bacterium that was isolated from Sewage water from the city Urumqi.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Weeksellaceae*
	Genus	*Algoriella*
	Species	**Algoriella xinjiangensis**
	Full Scientific Name (LPSN)	Algoriella xinjiangensis Yang et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %96.188

[Ref.: #69480]	Motility	no Confidence in %90

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	10 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]

Ability of spore formation

no Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Sewage water from the city Urumqi
[Ref.: #67770]	Geographic location (country and/or sea, region)	Xinjiang Uigur Autonomous Region
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence GQ383925 (>99% sequence identity) for Algoriella xinjiangensis subclade from Microbeatlas

Aquatic Samples	3155
Soil Samples	1069
Animal Samples	4040
Plant Samples	258
Total Samples	8522

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Algoriella xinjiangensis strain XJ109 16S ribosomal RNA gene, partial sequence	GQ383925	1483	GenBank ENA	684065 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Algoriella xinjiangensis XJ109	GCA_900115015	scaffold	GenBank ENA	684065 tax ID

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Algoriella xinjiangensis XJ109 NCBI: GCA_900115015.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Algoriella xinjiangensis XJ109 NCBI: GCA_900115015.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	96.188	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	95.17	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	85.874	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	89.497	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	97.475	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	90	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 16590, CGMCC 1.10229

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Algoriella xinjiangensis gen. nov., sp. nov., a new psychrotolerant bacterium of the family Flavobacteriaceae.	Yang N, Zhang L, Sun C	Antonie Van Leeuwenhoek	10.1007/s10482-015-0564-6	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Algoriella xinjiangensis XJ109

Algoriella xinjiangensis XJ109

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