Name: Streptomyces lavenduligriseus BA-6903 = FD 2212
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 16159

Type strain:

Species: Streptomyces lavenduligriseus

Strain Designation: BA-6903 = FD 2212

Culture col. no.: DSM 40487, AS 4.1851, ATCC 13306, CBS 706.72, IFO 13405, ISP 5487, NBRC 13405, NRRL B-3173, RIA 1366, JCM 4779, ATCC 29661, BCRC 15166, CGMCC 4.1913, JCM 4545, NRRL ISP-5487, VKM Ac-1159

Strain history: KCC S-0779 <-- IFO 13405 <-- SAJ <-- ISP 5487 <-- J. B. Routien BA-6903.

NCBI tax ID(s): 67315 (species)

SI-ID 389367

ATCC 13306, ATCC 29661, DSM 40487, IFO 13405, NRRL B-3173, JCM 4545, VKM Ac-1159, JCM 4779, NBRC 13405, AS 4.1851, BCRC 15166, CCRC 15166, CGMCC 4.1913, CBS 706.72

Special Collections

DSMZ
JCM

Other strains from Streptomyces lavenduligriseus

Section

Streptomyces lavenduligriseus BA-6903 = FD 2212 is a spore-forming, Gram-positive bacterium that produces antibiotic compounds and was isolated from Soil.

antibiotic compound production
Gram-positive
spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces lavenduligriseus**
	Full Scientific Name (LPSN)	Streptomyces lavenduligriseus (Locci et al. 1969) Witt and Stackebrandt 1991

Synonym

Streptoverticillium lavenduligriseum

Information on morphological and physiological properties Morphology

Multimedia content

[Ref.: #9592]

Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

[Ref.: #9592]

Culture medium

STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #9592]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

yes Confidence in %92.471

[Ref.: #9592]	Name of produced compound	narangomycin
[Ref.: #67770]	Name of produced compound	Narangomycin

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Malaya
[Ref.: #67770]	Country	Malaysia
[Ref.: #67770]	Country ISO 3 Code	MYS
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB184382 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	1
Soil Samples	63
Animal Samples	5
Plant Samples	3
Total Samples	72

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9592]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces lavenduligriseus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4545	D44224	120	GenBank ENA	67315 tax ID	*
[Ref.: #20218]	Streptomyces lavenduligriseus gene for 16S rRNA, partial sequence, strain: NBRC 13405	AB184382	1448	GenBank ENA	67315 tax ID	*
[Ref.: #20218]	Streptomyces lavenduligriseus strain NRRL B-3173T 16S ribosomal RNA gene, partial sequence	DQ442515	1495	GenBank ENA	67315 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces lavenduligriseus NRRL ISP-5487	GCA_000718625	contig	GenBank ENA	67315 tax ID

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces lavenduligriseus NRRL ISP-5487 NCBI: GCA_000718625.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	87.725	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.885	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	89.548	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	92.471	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	96	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	87.1	no

Availability in culture collections External links

[Ref.: #9592]

Culture collection no.

DSM 40487, AS 4.1851, ATCC 13306, CBS 706.72, IFO 13405, ISP 5487, NBRC 13405, NRRL B-3173, RIA 1366, JCM 4779, ATCC 29661, BCRC 15166, CGMCC 4.1913, JCM 4545, NRRL ISP-5487, VKM Ac-1159

[Ref.: #85224]

SI-ID 389367

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces lacticiproducens sp. nov., a lactic acid-producing streptomycete isolated from the rhizosphere of tomato plants.	Zhu HH, Yao Q, Yang SZ, Li ZK, Guo J	Int J Syst Evol Microbiol	10.1099/ijs.0.019125-0	2010	*
Phylogeny	Streptomyces roietensis sp. nov., an endophytic actinobacterium isolated from the surface-sterilized stem of jasmine rice, Oryza sativa KDML 105.	Kaewkla O, Franco CMM	Int J Syst Evol Microbiol	10.1099/ijsem.0.002402	2017	*
	Microbial synthesis of three metabolites of a tachykinin receptor antagonist, TAK-637.	Tarui N, Ikeura Y, Natsugari H, Nakahama K	J Biosci Bioeng	10.1263/jbb.92.285	2001	*

References

#9592

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40487

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#85224

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID389367.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces lavenduligriseus NRRL ISP-5487

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