Streptomyces thermoviolaceus subsp. thermoviolaceus (DSM 40443, ATCC 19283, CBS 278.66)

Name: Streptomyces thermoviolaceus subsp. thermoviolaceus (DSM 40443, ATCC 19283, CBS 278.66)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16049

Type strain

Strain Designation R-77

Culture col. no. DSM 40443 ATCC 19283 CBS 278.66 CBS 688.72 IFO 13387 20 more

NCBI tax ID(s) 1952 66860

Special Collections DSMZ JCM Wink compendium

Links

Streptomyces thermoviolaceus subsp. thermoviolaceus R-77 is a thermophilic prokaryote that was isolated from mixed fresh horse and swine manure.

thermophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 13993

LMG 14943,ATCC 19283,CCRC 12493,CCRC 12639,DSM 40443,IFO 12382,IFO 13387,IFO 13905,IMET 43353,JCM 4337,JCM 4843,LMG 19359,NCIMB 10076,NRRL B-12374,JCM 4239,HUT 6604,VKM Ac-1857,CBS 278.66,AS 4.1471,CBS688.66,NBRC 12382,NBRC 13387,NBRC 13905,BCRC 12493,BCRC 12639,HAMBI 1006,KCTC 19948,NCIB 10076,CGMCC 4.1471,VTT E-991428

@ref 20215

Last LPSN update 2025-12-16 09:50:45

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces thermoviolaceus subsp. thermoviolaceus

Full scientific name Streptomyces thermoviolaceus subsp. thermoviolaceus Henssen 1957 (Approved Lists 1980)

BacDive ID	Other strains from **Streptomyces thermoviolaceus subsp. thermoviolaceus** (3)	Type strain
16050	S. thermoviolaceus subsp. thermoviolaceus MB-C18, MB-C₁₈, DSM ...
164955	S. thermoviolaceus subsp. thermoviolaceus JCM 4239, IFO 12382, NBRC 12382
176652	S. thermoviolaceus subsp. thermoviolaceus SFG18, DSM 116655

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	99.9
125439		90.8
125438	positive	90.042

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
9547	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
9547	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)		Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
9547	positive	growth	45	thermophilic
18591	positive	optimum	28	mesophilic
67770	positive	growth	50	thermophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	99.5

Spore formation

@ref	Spore formation	Confidence
125439		92.2
125438		91.463

Halophily

@ref	Salt	Growth	Tested relation	Concentration
18591	NaCl	positive	maximum	7.5 %

Observation

67770

Observationquinones: MK-9(H₆), MK-9(H₈)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity
18591	22599 ChEBI	arabinose	-
68368	29016 ChEBI	arginine	-	from API 20E
18591	62968 ChEBI	cellulose	-
68368	16947 ChEBI	citrate	+	from API 20E
18591	28757 ChEBI	fructose	-
68368	5291 ChEBI	gelatin	-	from API 20E
18591	17234 ChEBI	glucose	+
68368	25094 ChEBI	lysine	-	from API 20E
18591	29864 ChEBI	mannitol	-
18591	17268 ChEBI	myo-inositol	-
68368	18257 ChEBI	ornithine	-	from API 20E
18591	16634 ChEBI	raffinose	-
18591	26546 ChEBI	rhamnose	-
18591	17992 ChEBI	sucrose	-
68368	27897 ChEBI	tryptophan	-	from API 20E
68368	16199 ChEBI	urea	+	from API 20E
18591	18222 ChEBI	xylose	-

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
68368	15688 ChEBI	acetoin	-	from API 20E
68368	35581 ChEBI	indole		from API 20E

Enzymes

@ref	Value	Activity	Ec
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
68368	beta-galactosidase	-	3.2.1.23	from API 20E
68368	gelatinase	-		from API 20E
68368	lysine decarboxylase	-	4.1.1.18	from API 20E
68368	ornithine decarboxylase	-	4.1.1.17	from API 20E
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
68368	urease	+	3.5.1.5	from API 20E

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
18591	-	-	-	-	+	-	+	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Equidae (Horse)
#Host	#Mammals	#Suidae (Pig,Swine)
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

Isolation

@ref	Sample type
9547	mixed fresh horse and swine manure
67770	Fresh horse-swine mixed manure

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
9547	1	Risk group (German classification) According to TRBA 466
18591	1	German classification According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1465097v1 assembly for Streptomyces thermoviolaceus subsp. thermoviolaceus JCM 4843	scaffold	GCA_014650975	66860.4	8112196876	66860	68.32
66792	ASM1203423v1 assembly for Streptomyces thermoviolaceus subsp. thermoviolaceus NBRC 13905	contig	GCA_012034235	66860.3		66860	61.31

Genome browser: GCA_014650975

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	S.thermoviolaceus 16S rRNA gene	Z68096	1483	1952
20218	Streptomyces thermoviolaceus subsp. thermoviolaceus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4337	D44059	121	66860
20218	Streptomyces thermoviolaceus subsp. thermoviolaceus gene for 16S rRNA, partial sequence, strain: NBRC 13387	AB184371	1454	66860
20218	Streptomyces thermoviolaceus subsp. thermoviolaceus gene for 16S rRNA, partial sequence, strain: NBRC 13905	AB184545	1479	66860
124043	Streptomyces thermoviolaceus subsp. thermoviolaceus strain DSM 40443(T) 16S ribosomal RNA gene, partial sequence.	MN686670	543	66860
124043	Streptomyces thermoviolaceus subsp. thermoviolaceus strain JCM 4843 16S ribosomal RNA gene, partial sequence.	MT760626	1393	66860

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Streptomyces thermoviolaceus subsp. thermoviolaceus JCM 4843
NCBI: GCA_014650975

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	92.20	no
125439	motility	BacteriaNetⓘ	no	90.80	no
125439	gram_stain	BacteriaNetⓘ	positive	99.90	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.50	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces thermoviolaceus subsp. thermoviolaceus JCM 4843
NCBI: GCA_014650975.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.04	no
125438	anaerobic	anaerobicⓘ	no	96.46	no
125438	aerobic	aerobicⓘ	yes	89.18	no
125438	spore-forming	spore-formingⓘ	yes	91.46	no
125438	thermophilic	thermophileⓘ	no	92.79	no
125438	flagellated	motile2+ⓘ	no	88.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Distribution, purification, and characterization of thermostable phenylalanine dehydrogenase from thermophilic actinomycetes.	Ohshima T, Takada H, Yoshimura T, Esaki N, Soda K.	J Bacteriol	10.1128/jb.173.13.3943-3948.1991	1991
Metabolism	Elucidation of the molecular basis for arabinoxylan-debranching activity of a thermostable family GH62 alpha-l-arabinofuranosidase from Streptomyces thermoviolaceus.	Wang W, Mai-Gisondi G, Stogios PJ, Kaur A, Xu X, Cui H, Turunen O, Savchenko A, Master ER.	Appl Environ Microbiol	10.1128/aem.00685-14	2014
Enzymology	Purification, properties, and partial amino acid sequences of thermostable xylanases from Streptomyces thermoviolaceus OPC-520.	Tsujibo H, Miyamoto K, Kuda T, Minami K, Sakamoto T, Hasegawa T, Inamori Y.	Appl Environ Microbiol	10.1128/aem.58.1.371-375.1992	1992
	Genetic and biotechnological potential of thermophilic Streptomyces sp. isolated from Baikal freshwater psychrophilic sponge.	Dmitrieva M, Shelkovnikova V, Morgunova M, Malygina E, Imidoeva N, Belyshenko A, Telnova T, Vavilina T, Konovalov A, Batalova A, Lipatova O, Listopad A, Axenov-Gribanov D.	Sci Rep	10.1038/s41598-025-25364-y	2025
Enzymology	Identification of plasmids from thermophilic Streptomyces strains and development of a gene cloning system for thermophilic Streptomyces species.	Yamada Y, Ikeda H.	J Ind Microbiol Biotechnol	10.1093/jimb/kuae042	2024
	The inoculation of Bacillus paralicheniformis and Streptomyces thermoviolaceus enhances the lignocellulose degradation and microbial communities during spent mushroom substrate composting.	Zhang J, Zou YJ, Wang SL, Zhang WW, Chen QJ, Wang QY, Guan TK, Zhang JY, Zhao MR, Zhang GQ.	Environ Res	10.1016/j.envres.2024.120157	2024
	Construction of lignocellulose-degrading compound microbial inoculum and its effects on green waste composting.	Feng X, Qiu M, Zhang L.	J Environ Manage	10.1016/j.jenvman.2024.122502	2024
	Streptomyces species: A friend or foe? the diagnostic dilemma of cutaneous and mucocutaneous infections.	Keche A, Mishra G, Patil G, Ganguly S, Ranjan S.	J Family Med Prim Care	10.4103/jfmpc.jfmpc_1405_24	2025
Enzymology	The application of bioremediation in wastewater treatment plants for microplastics removal: a practical perspective.	Tang KHD, Hadibarata T.	Bioprocess Biosyst Eng	10.1007/s00449-022-02793-x	2022
Phylogeny	Detection of anaerobic and aerobic bacteria from commercial tattoo and permanent makeup inks.	Yoon S, Kondakala S, Foley SL, Moon MS, Huang M-CJ, Periz G, Zang J, Katz LM, Kim S-J, Kweon O.	Appl Environ Microbiol	10.1128/aem.00276-24	2024
Enzymology	Structural characterization of the family GH115 alpha-glucuronidase from Amphibacillus xylanus yields insight into its coordinated action with alpha-arabinofuranosidases.	Yan R, Wang W, Vuong TV, Xiu Y, Skarina T, Di Leo R, Gatenholm P, Toriz G, Tenkanen M, Stogios PJ, Master ER.	N Biotechnol	10.1016/j.nbt.2021.01.005	2021
	Microbial Inoculation during the Short-Term Composting Process Enhances the Nutritional and Functional Properties of Oyster Mushrooms (Pleurotus ostreatus).	Wang Q, Zhao M, Wang Y, Xie Z, Zhao S, You S, Chen Q, Zhang W, Qin Y, Zhang G.	Life (Basel)	10.3390/life14020201	2024
	Insights into the Mycosphere Fungal Community and Its Association with Nucleoside Accumulation in Ophiocordyceps sinensis.	Zhang J, Zhang W, Wu X, Fu W, Yang C, Long N.	J Fungi (Basel)	10.3390/jof11100696	2025
	Discovery and biochemical characterization of thermostable glycerol oxidases.	Santema LL, Rotilio L, Xiang R, Tjallinks G, Guallar V, Mattevi A, Fraaije MW.	Appl Microbiol Biotechnol	10.1007/s00253-023-12883-9	2024
Metabolism	Crystal structure of the solute-binding protein BxlE from Streptomyces thermoviolaceus OPC-520 complexed with xylobiose.	Tomoo K, Miki Y, Morioka H, Seike K, Ishida T, Ikenishi S, Miyamoto K, Hasegawa T, Yamano A, Hamada K, Tsujibo H.	J Biochem	10.1093/jb/mvw097	2017
Enzymology	The Crystal Structure of a Streptomyces thermoviolaceus Thermophilic Chitinase Known for Its Refolding Efficiency.	Malecki PH, Bejger M, Rypniewski W, Vorgias CE.	Int J Mol Sci	10.3390/ijms21082892	2020
Metabolism	[Screening and Enzyme Production Characteristics of Thermophilic Cellulase-producing Strains].	Feng HM, Qin YS, Li XF, Zhou JX, Peng XW.	Huan Jing Ke Xue		2016
Phylogeny	Isolation and screening of Thermoactinomycetaceae family members as an extremophilic poor investigated and promising natural source of antimicrobial substances.	Seyed Shirazi SR, Hamedi J.	Iran J Microbiol	10.18502/ijm.v15i1.11920	2023
	Structure and Function Analysis of Cultivated Meconopsis integrifolia Soil Microbial Community Based on High-Throughput Sequencing and Culturability.	Wang Y, Ma Q, Wang L, Hu J, Xue H, Han D, Xing Z, Ruan Z.	Biology (Basel)	10.3390/biology12020160	2023
	Complete xylan utilization pathway and regulation mechanisms involved in marine algae degradation by cosmopolitan marine and human gut microbiota.	Sun HN, Chen XL, Wang Y, Zhu YP, Teng ZJ, Cao HY, Xu TT, Chen Y, Zhang YZ, Zhao F.	ISME J	10.1093/ismejo/wraf085	2025
	Multi-Response Optimization of Granaticinic Acid Production by Endophytic Streptomyces thermoviolaceus NT1, Using Response Surface Methodology.	Roy S, Halder SK, Banerjee D.	Bioengineering (Basel)	10.3390/bioengineering3030019	2016
	High-Level Extracellular Expression of a New beta-N-Acetylglucosaminidase in Escherichia coli for Producing GlcNAc.	Li C, Jiang S, Du C, Lu Z, He N, Zhou Y, Jiang S S, Zhang G G.	Front Microbiol	10.3389/fmicb.2021.648373	2021
	Versatile Product Detection via Coupled Assays for Ultrahigh-Throughput Screening of Carbohydrate-Active Enzymes in Microfluidic Droplets.	Ladeveze S, Zurek PJ, Kaminski TS, Emond S, Hollfelder F.	ACS Catal	10.1021/acscatal.3c01609	2023
Enzymology	An efficient arabinoxylan-debranching alpha-L-arabinofuranosidase of family GH62 from Aspergillus nidulans contains a secondary carbohydrate binding site.	Wilkens C, Andersen S, Petersen BO, Li A, Busse-Wicher M, Birch J, Cockburn D, Nakai H, Christensen HEM, Kragelund BB, Dupree P, McCleary B, Hindsgaul O, Hachem MA, Svensson B.	Appl Microbiol Biotechnol	10.1007/s00253-016-7417-8	2016
	Identification of novel extracellular putative chitinase and hydrolase from Geomyces sp. B10I with the biodegradation activity towards polyesters.	Urbanek AK, Arroyo M, de la Mata I, Mironczuk AM.	AMB Express	10.1186/s13568-022-01352-7	2022
	Heterologous Expression of a Thermostable Chitinase from Myxococcus xanthus and Its Application for High Yield Production of Glucosamine from Shrimp Shell.	Lyu Y, Zheng F, Qiu C, Wang M, Wang D, Zhang X, Voglmeir J, Liu L, Yu X.	Foods	10.3390/foods10112808	2021
Phylogeny	Characterization of bacterial community structure during in-vessel composting of agricultural waste by 16S rRNA sequencing.	Varma VS, Dhamodharan K, Kalamdhad AS.	3 Biotech	10.1007/s13205-018-1319-7	2018
	Alicyclobacillus mali FL18 as a Novel Source of Glycosyl Hydrolases: Characterization of a New Thermophilic beta-Xylosidase Tolerant to Monosaccharides.	Salzano F, Aulitto M, Fiorentino G, Pedone E, Contursi P, Limauro D.	Int J Mol Sci	10.3390/ijms232214310	2022
	Streptomyces sp. Strain PBR11, a Forest-Derived Soil Actinomycetia with Antimicrobial Potential.	Mazumdar R, Dutta PP, Saikia J, Borah JC, Thakur D.	Microbiol Spectr	10.1128/spectrum.03489-22	2023
	Characterization of a New Multifunctional GH20 beta-N-Acetylglucosaminidase From Chitinibacter sp. GC72 and Its Application in Converting Chitin Into N-Acetyl Glucosamine.	Chen Y, Zhou N, Chen X, Wei G, Zhang A, Chen K, Ouyang P.	Front Microbiol	10.3389/fmicb.2022.874908	2022
Enzymology	Crystallization and preliminary X-ray crystallographic analysis of BxlA, an intracellular beta-D-xylosidase from Streptomyces thermoviolaceus OPC-520.	Morioka H, Miki Y, Saito K, Tomoo K, Ishida T, Hasegawa T, Yamano A, Takada C, Miyamoto K, Tsujibo H.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309110013400	2010
Metabolism	Symbiotic Streptomyces sp. TN119 GH 11 xylanase: a new pH-stable, protease- and SDS-resistant xylanase.	Zhou J, Shi P, Zhang R, Huang H, Meng K, Yang P, Yao B.	J Ind Microbiol Biotechnol	10.1007/s10295-010-0795-5	2011
Enzymology	Equilibrium heat-induced denaturation of chitinase 40 from Streptomyces thermoviolaceus.	Pyrpassopoulos S, Vlassi M, Tsortos A, Papanikolau Y, Petratos K, Vorgias CE, Nounesis G.	Proteins	10.1002/prot.21003	2006
	A DasA family sugar binding protein Ste2 links nutrient and oxidative stress to exopolysaccharides production in Streptomyces sp. 139.	Geng M, Ai L, Ma M, Li P, Guo L, Shan G, Bai L.	BMC Microbiol	10.1186/s12866-022-02472-7	2022
Metabolism	Molecular characterization of an intracellular beta-N-acetylglucosaminidase involved in the chitin degradation system of Streptomyces thermoviolaceus OPC-520.	Kubota T, Miyamoto K, Yasuda M, Inamori Y, Tsujibo H.	Biosci Biotechnol Biochem	10.1271/bbb.68.1306	2004
Metabolism	Crystallization and preliminary X-ray crystallographic analysis of BxlE, a xylobiose transporter from Streptomyces thermoviolaceus OPC-520.	Seike K, Sato J, Tomoo K, Ishida T, Yamano A, Ikenishi S, Miyamoto K, Tsujibo H.	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/s1744309107024906	2007
Enzymology	Cloning, sequencing, and expression of the gene encoding an intracellular beta-D-xylosidase from Streptomyces thermoviolaceus OPC-520.	Tsujibo H, Takada C, Tsuji A, Kosaka M, Miyamoto K, Inamori Y.	Biosci Biotechnol Biochem	10.1271/bbb.65.1824	2001
Enzymology	Overexpression, purification, and characterization of a thermostable chitinase (Chi40) from Streptomyces thermoviolaceus OPC-520.	Christodoulou E, Duffner F, Vorgias CE.	Protein Expr Purif	10.1006/prep.2001.1490	2001
Enzymology	Synthesis of chitinase in Streptomyces thermoviolaceus is regulated by a two-component sensor-regulator system.	Tsujibo H, Hatano N, Okamoto T, Endo H, Miyamoto K, Inamori Y.	FEMS Microbiol Lett	10.1111/j.1574-6968.1999.tb08829.x	1999
Enzymology	Cloning and expression of an alpha-L-arabinofuranosidase gene (stxIV) from Streptomyces thermoviolaceus OPC-520, and characterization of the enzyme.	Tsujibo H, Takada C, Wakamatsu Y, Kosaka M, Tsuji A, Miyamoto K, Inamori Y.	Biosci Biotechnol Biochem	10.1271/bbb.66.434	2002
	Molecular evolution and transcriptional profile of GH3 and GH20 beta-N-acetylglucosaminidases in the entomopathogenic fungus Metarhizium anisopliae.	Oliveira ES, Junges A, Sbaraini N, Andreis FC, Thompson CE, Staats CC, Schrank A.	Genet Mol Biol	10.1590/1678-4685-gmb-2017-0363	2018
	Family 19 chitinases from Streptomyces thermoviolaceus OPC-520: molecular cloning and characterization.	Tsujibo H, Okamoto T, Hatano N, Miyamoto K, Watanabe T, Mitsutomi M, Inamori Y.	Biosci Biotechnol Biochem	10.1271/bbb.64.2445	2000
Phylogeny	Chemical profiling of Streptomyces sp. Al-Dhabi-2 recovered from an extreme environment in Saudi Arabia as a novel drug source for medical and industrial applications.	Al-Dhabi NA, Esmail GA, Duraipandiyan V, Arasu MV.	Saudi J Biol Sci	10.1016/j.sjbs.2019.03.009	2019
Enzymology	Purification and characterization of a thermostable chitinase from Streptomyces thermoviolaceus OPC-520 and cloning of the encoding gene.	Tsujibo H, Hatano N, Endo H, Miyamoto K, Inamori Y.	Biosci Biotechnol Biochem	10.1271/bbb.64.96	2000
	Evaluation of Recombinant Human Growth Hormone Secretion in E. coli using the L-asparaginase II Signal Peptide.	Zamani M, Nezafat N, Ghasemi Y.	Avicenna J Med Biotechnol		2016
	Cloning, characterization and expression of beta-N-acetylglucosaminidase gene from Streptomyces thermoviolaceus OPC-520(1).	Tsujibo H, Hatano N, Mikami T, Izumizawa Y, Miyamoto K, Inamori Y.	Biochim Biophys Acta	10.1016/s0304-4165(98)00098-1	1998
Enzymology	Cloning of a two-component regulatory system probably involved in the regulation of chitinase in Streptomyces coelicolor A3(2).	Kormanec J, Sevcikova B, Homerova D.	Folia Microbiol (Praha)	10.1007/bf02817612	2000
Enzymology	Molecular cloning of a new erythropoiesis-stimulating activity (ESA36) from Streptomyces thermoviolaceus and expression in Escherichia coli.	Sugie M, Oka S, Tanaka H.	Biochem Biophys Res Commun	10.1006/bbrc.1995.2432	1995
Enzymology	Characterization and diversity of the complete set of GH family 3 enzymes from Rhodothermus marinus DSM 4253.	Ara KZG, Manberger A, Gabrisko M, Linares-Pasten JA, Jasilionis A, Fridjonsson OH, Hreggvidsson GO, Janecek S, Nordberg Karlsson E.	Sci Rep	10.1038/s41598-020-58015-5	2020
Enzymology	Cloning and sequence analysis of the gene encoding a thermostable chitinase from Streptomyces thermoviolaceus OPC-520.	Tsujibo H, Endo H, Minoura K, Miyamoto K, Inamori Y.	Gene	10.1016/0378-1119(93)90183-4	1993
	In silico Screening and Heterologous Expression of a Polyethylene Terephthalate Hydrolase (PETase)-Like Enzyme (SM14est) With Polycaprolactone (PCL)-Degrading Activity, From the Marine Sponge-Derived Strain Streptomyces sp. SM14.	Almeida EL, Carrillo Rincon AF, Jackson SA, Dobson ADW.	Front Microbiol	10.3389/fmicb.2019.02187	2019
Enzymology	Expression in Escherichia coli of a gene encoding a thermostable chitinase from Streptomyces thermoviolaceus OPC-520.	Tsujibo H, Endo H, Miyamoto K, Inamori Y.	Biosci Biotechnol Biochem	10.1271/bbb.59.145	1995
	Functional clues from the crystal structure of an orphan periplasmic ligand-binding protein from Treponema pallidum.	Brautigam CA, Deka RK, Liu WZ, Tomchick DR, Norgard MV.	Protein Sci	10.1002/pro.3133	2017
	Sequence of the Streptomyces thermoviolaceus CUB74 alpha-amylase-encoding gene and its transcription analysis in Streptomyces lividans.	Bahri SM, Ward JM.	Gene	10.1016/0378-1119(93)90628-g	1993
Metabolism	A Novel Manno-Oligosaccharide Binding Protein Identified in Alkaliphilic Bacillus sp. N16-5 Is Involved in Mannan Utilization.	Song Y, Li J, Meng S, Yin L, Xue Y, Ma Y.	PLoS One	10.1371/journal.pone.0150059	2016
Metabolism	The effects of temperature, pH and growth rate on secondary metabolism in Streptomyces thermoviolaceus grown in a chemostat.	James PD, Edwards C, Dawson M.	J Gen Microbiol	10.1099/00221287-137-7-1715	1991
	Enhancement of Peroxidase Stability Against Oxidative Self-Inactivation by Co-immobilization with a Redox-Active Protein in Mesoporous Silicon and Silica Microparticles.	Sahare P, Ayala M, Vazquez-Duhalt R, Pal U, Loni A, Canham LT, Osorio I, Agarwal V.	Nanoscale Res Lett	10.1186/s11671-016-1605-4	2016
	Cloning and expression of an alpha-amylase gene from Streptomyces thermoviolaceus CUB74 in Escherichia coli JM107 and S. lividans TK24.	Bahri SM, Ward JM.	J Gen Microbiol	10.1099/00221287-136-5-811	1990
Enzymology	Regulation of a thermostable alpha-amylase of Streptomyces thermoviolaceus CUB74: maltotriose is the smallest inducer.	Bahri SM, Ward M.	Biochimie	10.1016/0300-9084(90)90009-6	1990
Metabolism	A trimodular bacterial enzyme combining hydrolytic activity with oxidative glycosidic bond cleavage efficiently degrades chitin.	Mekasha S, Tuveng TR, Askarian F, Choudhary S, Schmidt-Dannert C, Niebisch A, Modregger J, Vaaje-Kolstad G, Eijsink VGH.	J Biol Chem	10.1074/jbc.ra120.013040	2020
Metabolism	Functional Characterization of Corynebacterium alkanolyticum beta-Xylosidase and Xyloside ABC Transporter in Corynebacterium glutamicum.	Watanabe A, Hiraga K, Suda M, Yukawa H, Inui M.	Appl Environ Microbiol	10.1128/aem.00792-15	2015
Enzymology	Purification and properties of a thermostable chitinase from Streptomyces thermoviolaceus OPC-520.	Tsujibo H, Minoura K, Miyamoto K, Endo H, Moriwaki M, Inamori Y.	Appl Environ Microbiol	10.1128/aem.59.2.620-622.1993	1993
	A novel beta-N-acetylglucosaminidase from Streptomyces thermoviolaceus OPC-520: gene cloning, expression, and assignment to family 3 of the glycosyl hydrolases.	Tsujibo H, Hatano N, Mikami T, Hirasawa A, Miyamoto K, Inamori Y.	Appl Environ Microbiol	10.1128/aem.64.8.2920-2924.1998	1998
	The carbohydrate-binding module of xylanase from Nonomuraea flexuosa decreases its non-productive adsorption on lignin.	Zhang J, Moilanen U, Tang M, Viikari L.	Biotechnol Biofuels	10.1186/1754-6834-6-18	2013
	Cloning and sequence analysis of genes encoding xylanases and acetyl xylan esterase from Streptomyces thermoviolaceus OPC-520.	Tsujibo H, Ohtsuki T, Iio T, Yamazaki I, Miyamoto K, Sugiyama M, Inamori Y.	Appl Environ Microbiol	10.1128/aem.63.2.661-664.1997	1997
Metabolism	Molecular characterization of a high-affinity xylobiose transporter of Streptomyces thermoviolaceus OPC-520 and its transcriptional regulation.	Tsujibo H, Kosaka M, Ikenishi S, Sato T, Miyamoto K, Inamori Y.	J Bacteriol	10.1128/jb.186.4.1029-1037.2004	2004
	The stability of the TIM-barrel domain of a psychrophilic chitinase.	Stavros P, Malecki PH, Theodoridou M, Rypniewski W, Vorgias CE, Nounesis G.	Biochem Biophys Rep	10.1016/j.bbrep.2015.07.016	2015
Metabolism	Mapping the membrane proteome of anaerobic gut fungi identifies a wealth of carbohydrate binding proteins and transporters.	Seppala S, Solomon KV, Gilmore SP, Henske JK, O'Malley MA.	Microb Cell Fact	10.1186/s12934-016-0611-7	2016
Metabolism	Fusion of a xylan-binding module to gluco-oligosaccharide oxidase increases activity and promotes stable immobilization.	Vuong TV, Master ER.	PLoS One	10.1371/journal.pone.0095170	2014
	Purification and properties of a xylan-binding endoxylanase from Alkaliphilic bacillus sp. strain K-1.	Ratanakhanokchai K, Kyu KL, Tanticharoen M.	Appl Environ Microbiol	10.1128/aem.65.2.694-697.1999	1999
Metabolism	Activating and Elucidating Metabolism of Complex Sugars in Yarrowia lipolytica.	Ryu S, Hipp J, Trinh CT.	Appl Environ Microbiol	10.1128/aem.03582-15	2016
Metabolism	The L-Arabinan utilization system of Geobacillus stearothermophilus.	Shulami S, Raz-Pasteur A, Tabachnikov O, Gilead-Gropper S, Shner I, Shoham Y.	J Bacteriol	10.1128/jb.00222-11	2011
Metabolism	Transcriptomic analysis of xylan utilization systems in Paenibacillus sp. strain JDR-2.	Sawhney N, Crooks C, St John F, Preston JF.	Appl Environ Microbiol	10.1128/aem.03523-14	2015
Enzymology	Novel beta-N-acetylglucosaminidases from Vibrio harveyi 650: cloning, expression, enzymatic properties, and subsite identification.	Suginta W, Chuenark D, Mizuhara M, Fukamizo T.	BMC Biochem	10.1186/1471-2091-11-40	2010
Metabolism	Novel carbohydrate-binding module of beta-1,3-xylanase from a marine bacterium, Alcaligenes sp. strain XY-234.	Okazaki F, Tamaru Y, Hashikawa S, Li YT, Araki T.	J Bacteriol	10.1128/jb.184.9.2399-2403.2002	2002
Metabolism	Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX.	Lykidis A, Mavromatis K, Ivanova N, Anderson I, Land M, DiBartolo G, Martinez M, Lapidus A, Lucas S, Copeland A, Richardson P, Wilson DB, Kyrpides N.	J Bacteriol	10.1128/jb.01899-06	2007
Metabolism	The chitinolytic cascade in Vibrios is regulated by chitin oligosaccharides and a two-component chitin catabolic sensor/kinase.	Li X, Roseman S.	Proc Natl Acad Sci U S A	10.1073/pnas.0307645100	2004
Metabolism	Novel insights into the diversity of catabolic metabolism from ten haloarchaeal genomes.	Anderson I, Scheuner C, Goker M, Mavromatis K, Hooper SD, Porat I, Klenk HP, Ivanova N, Kyrpides N.	PLoS One	10.1371/journal.pone.0020237	2011
Metabolism	Microarray-based characterization of microbial community functional structure and heterogeneity in marine sediments from the Gulf of Mexico.	Wu L, Kellogg L, Devol AH, Tiedje JM, Zhou J.	Appl Environ Microbiol	10.1128/aem.02751-07	2008
Phylogeny	Purification and characterization of three thermostable endochitinases of a noble Bacillus strain, MH-1, isolated from chitin-containing compost.	Sakai K, Yokota A, Kurokawa H, Wakayama M, Moriguchi M.	Appl Environ Microbiol	10.1128/aem.64.9.3397-3402.1998	1998
Enzymology	Molecular analysis of the gene encoding a novel cold-adapted chitinase (ChiB) from a marine bacterium, Alteromonas sp. strain O-7.	Orikoshi H, Baba N, Nakayama S, Kashu H, Miyamoto K, Yasuda M, Inamori Y, Tsujibo H.	J Bacteriol	10.1128/jb.185.4.1153-1160.2003	2003
Metabolism	Structural insights into the specificity of Xyn10B from Paenibacillus barcinonensis and its improved stability by forced protein evolution.	Gallardo O, Pastor FI, Polaina J, Diaz P, Lysek R, Vogel P, Isorna P, Gonzalez B, Sanz-Aparicio J.	J Biol Chem	10.1074/jbc.m109.064394	2010
Metabolism	Several archaeal homologs of putative oligopeptide-binding proteins encoded by Thermotoga maritima bind sugars.	Nanavati DM, Thirangoon K, Noll KM.	Appl Environ Microbiol	10.1128/aem.72.2.1336-1345.2006	2006
Enzymology	Molecular and biochemical characterization of two xylanase-encoding genes from Cellulomonas pachnodae.	Cazemier AE, Verdoes JC, van Ooyen AJ, Op den Camp HJ.	Appl Environ Microbiol	10.1128/aem.65.9.4099-4107.1999	1999
Metabolism	A two-component system regulates the expression of an ABC transporter for xylo-oligosaccharides in Geobacillus stearothermophilus.	Shulami S, Zaide G, Zolotnitsky G, Langut Y, Feld G, Sonenshein AL, Shoham Y.	Appl Environ Microbiol	10.1128/aem.02367-06	2007
	Carbohydrate-containing polymers of the cell wall of the thermophilic streptomycete Streptomyces thermoviolaceus subsp. thermoviolaceus VKM Ac-1857T.	Kozlova YI, Streshinskaya GM, Shashkov AS, Senchenkova SN, Evtushenko LI	Biochemistry (Mosc)	10.1134/s0006297906070108	2006
	New insights into the neuroprotective and beta-secretase1 inhibitor profiles of tirandamycin B isolated from a newly found Streptomyces composti sp. nov.	Duangupama T, Pratuangdejkul J, Chongruchiroj S, Pittayakhajonwut P, Intaraudom C, Tadtong S, Nunthanavanit P, Samee W, He YW, Tanasupawat S, Thawai C.	Sci Rep	10.1038/s41598-023-32043-3	2023
Phylogeny	Discovery of two new actinobacteria, Micromonospora palythoicola sp. nov. and Streptomyces poriticola sp. nov., isolated from marine invertebrates.	Kanchanasin P, Salahong T, Sripreechasak P, Suriyachadkun C, Harunari E, Igarashi Y, Tanasupawat S, Tawinwung S, Vimolmangkang S, Chaotham C, Phongsopitanun W.	Sci Rep	10.1038/s41598-024-73040-4	2024
Phylogeny	Streptomyces bangladeshensis sp. nov., isolated from soil, which produces bis-(2-ethylhexyl)phthalate.	Al-Bari MAA, Bhuiyan MSA, Flores ME, Petrosyan P, Garcia-Varela M, Islam MAU.	Int J Syst Evol Microbiol	10.1099/ijs.0.63516-0	2005
Phylogeny	Classification of thermophilic streptomycetes, including the description of Streptomyces thermoalcalitolerans sp. nov.	Kim B, Sahin N, Minnikin DE, Zakrzewska-Czerwinska J, Mordarski M, Goodfellow M.	Int J Syst Bacteriol	10.1099/00207713-49-1-7	1999
Phylogeny	Reclassification of four subspecies in the genus Streptomyces to Streptomyces rubradiris sp. nov., Streptomyces asoensis sp. nov., Streptomyces fructofermentans sp. nov. and Streptomyces ossamyceticus sp. nov.	Komaki H, Tamura T	Int J Syst Evol Microbiol	10.1099/ijsem.0.005078	2021

References

#9547	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40443
#18591	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68368	Automatically annotated from API 20E .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Streptomyces thermoviolaceus subsp. thermoviolaceus (DSM 40443, ATCC 19283, CBS 278.66)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20E

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014650975

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media