Name: Cloacibacillus porcorum COR2-251-APC-3
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 159583

Type strain:

Species: Cloacibacillus porcorum

Strain Designation: COR2-251-APC-3

Culture col. no.: DSM 105753

Strain history: <- T. Clavel , TU Munich, Freising-Weihenstephan, Germany; COR2-251-APC-3

NCBI tax ID(s): 1197717 (species)

SI-ID 406568

DSM 105753

Special Collections

Other strains from Cloacibacillus porcorum

Section

Cloacibacillus porcorum COR2-251-APC-3 is a bacterium that was isolated from feces; pig, 10 month old, genotype: APC1311/+ referring to the adenomatous-polyposis-coli protein.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Synergistota*
	Class	*Synergistia*
	Order	*Synergistales*
	Family	*Synergistaceae*
	Genus	*Cloacibacillus*
	Species	**Cloacibacillus porcorum**
	Full Scientific Name (LPSN)	Cloacibacillus porcorum Looft et al. 2013

Information on culture and growth conditions Culture and growth conditions

[Ref.: #66409]

Culture medium

CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)

[Ref.: #66409]

Culture medium growth

[Ref.: #66409]

Culture medium link

Medium recipe at MediaDive

[Ref.: #66409]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #66409]			growth	37 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #66409]	Sample type/isolated from	feces; pig, 10 month old, genotype: APC1311/+ referring to the adenomatous-polyposis-coli (APC) protein
[Ref.: #66409]	Geographic location (country and/or sea, region)	Kranzberg (Bavaria)
[Ref.: #66409]	Country	Germany
[Ref.: #66409]	Country ISO 3 Code	DEU
[Ref.: #66409]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Host	#Mammals	#Suidae (Pig,Swine)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence MN537495 (>99% sequence identity) for Cloacibacillus porcorum subclade from Microbeatlas

Aquatic Samples	106
Soil Samples	28
Animal Samples	4125
Plant Samples	14
Total Samples	4273

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #66409]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66409]	Cloacibacillus porcorum strain DSM 105753 16S ribosomal RNA gene, partial sequence	MN537495	1471	GenBank ENA	1197717 tax ID

Availability in culture collections External links

[Ref.: #66409]

Culture collection no.

DSM 105753

[Ref.: #112059]

SI-ID 406568

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66409

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105753

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#112059

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406568.1 )

* These data were automatically processed and therefore are not curated

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