Corynebacterium stationis (DSM 107248, BL-383-APC-3D)

Name: Corynebacterium stationis (DSM 107248, BL-383-APC-3D)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 158891

Type strain

Strain Designation BL-383-APC-3D

Culture col. no. DSM 107248 BL-383-APC-3D

NCBI tax ID(s) 1705

Special Collections DSMZ Pig DZIF

History DSMZ <- T. Clavel; TU Munich, Freising-Weihenstephan, Germany; BL-383-APC-3D

Links

Corynebacterium stationis BL-383-APC-3D is a bacterium that was isolated from feces; pig, 5 month old, genotype: APC1311/+ referring to the adenomatous-polyposis-coli protein.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 400156

DSM 107248

@ref 20215

Last LPSN update 2026-05-29 08:44:04

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Corynebacteriaceae

Genus Corynebacterium

Species Corynebacterium stationis

Full scientific name Corynebacterium stationis (ZoBell and Upham 1944) Bernard et al. 2010

Synonyms (2)

Brevibacterium stationis
"Achromobacter stationis"

BacDive ID	Other strains from **Corynebacterium stationis** (4)	Type strain
3078	C. stationis 622, DSM 20302, ATCC 14403, CCUG 43497, CIP ... (type strain)
3079	C. stationis DSM 20305, ATCC 6872, IAM 1645, NCTC 2399, ...
130266	C. stationis G1CH1, DSM 26547
136014	C. stationis CIP 101282, NCIMB 9154, CCUG 43498

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125438		92.5
125438		90.815	positive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
65713	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)		Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
65713	positive	growth	37

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		95.424

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Host	#Mammals	#Suidae (Pig,Swine)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
65713	feces; pig, 5 month old, genotype: APC1311/+ referring to the adenomatous-polyposis-coli (APC) protein	Kranzberg (Bavaria)	Germany	DEU	Europe

Taxonmaps

69479

Global distribution of 16S sequence MN537527 (>99% sequence identity) for Corynebacterium stationis subclade from Microbeatlas

Aquatic Samples	368
Soil Samples	533
Animal Samples	6752
Plant Samples	171
Total Samples	7824

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM1284386v1 assembly for Corynebacterium stationis BL-383-APC-3D	contig	GCA_012843865	1705.20	1705	75.45

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
65713	Corynebacterium stationis strain DSM 107248 16S ribosomal RNA gene, partial sequence	MN537527	1461		1705

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1284386v1 assembly for Corynebacterium stationis BL-383-APC-3D
NCBI: GCA_012843865

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	89.35	no
125439	gram_stain	BacteriaNetⓘ	negative	37.24	no
125439	motility	BacteriaNetⓘ	no	71.83	no
125439	spore_formation	BacteriaNetⓘ	no	95.42	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Corynebacterium stationis BL-383-APC-3D
NCBI: GCA_012843865.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.82	no
125438	anaerobic	anaerobicⓘ	no	95.51	no
125438	aerobic	aerobicⓘ	yes	75.37	no
125438	spore-forming	spore-formingⓘ	no	78.24	no
125438	thermophilic	thermophileⓘ	no	94.50	no
125438	flagellated	motile2+ⓘ	no	92.50	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#65713	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 107248
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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