Corynebacterium stationis | DSM 20305, ATCC 6872, IAM 1645, NCTC 2399

Strain identifier

BacDive ID: 3079

Type strain:

Species: Corynebacterium stationis

Culture col. no.: DSM 20305, ATCC 6872, IAM 1645, NCTC 2399

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Corynebacterium stationis DSM 20305 is a mesophilic human pathogen that produces amino acids and was isolated from stool of infant.

amino acid production
human pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification.Name and taxonomic classification

	Last LPSN update	10-09-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Actinobacteria
	Class	Actinobacteria
	Order	Mycobacteriales
	Family	Corynebacteriaceae
	Genus	Corynebacterium
	Species	Corynebacterium stationis
	Full Scientific Name (PNU)	Corynebacterium stationis (ZoBell and Upham 1944) Bernard et al. 2010

	Synonym	Brevibacterium stationis
	Synonym	Achromobacter stationis

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #8707]	Name of produced compound	ADP
[Ref.: #8707]	Name of produced compound	ATP
[Ref.: #8707]	Name of produced compound	flavin-adenine dinucleotide
[Ref.: #8707]	Name of produced compound	2-substituted-6,9-ß-D-ribofuranoside-5'-phosphoric hydroxypurine acid esters
[Ref.: #8707]	Name of produced compound	5' inosinic acid
[Ref.: #8707]	Name of produced compound	L isoleucine
[Ref.: #8707]	Name of produced compound	NADP
[Ref.: #8707]	Name of produced compound	orotidylic acid
[Ref.: #8707]	Name of produced compound	protein

[Ref.: #8707]	Multimedia content
[Ref.: #8707]	Caption	Medium 693 37°C
[Ref.: #8707]	License/Copyright	(C) Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH
[Ref.: #8707]	Intellectual property rights	© Leibniz-Institut DSMZ

[Ref.: #8707]	Murein short key	A31
[Ref.: #8707]	Murein types	A1gamma m-Dpm-direct

Information on culture and growth conditionsCulture and growth conditions

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Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

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Culture medium growth

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Culture medium link

medium recipe provided by DSMZ

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Culture medium

TRYPTICASE SOY BROTH AGAR (TSBA, DSMZ Medium 535)

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Culture medium growth

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Culture medium link

medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #8707]			growth	28 ̊C

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Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #8707]

Sample type/isolated from

stool of infant

Isolation sources categories

#Host	#Human	#Child
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #8707]	Pathogenicity (human)	yes
[Ref.: #8707]	Biosafety level	1	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #8707]

GC-content

54.6 mol%

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence type	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Corynebacterium ammoniagenes guaB, ORF genes for IMP dehydrogenase, hypothetical protein, complete cds	AB003154 ENA		3438	1705 tax ID	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Corynebacterium ammoniagenes ORF1, ORF2, guaA genes, complete cds	AB003155 ENA		4584	1705 tax ID	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Corynebacterium ammoniagenes ORF1, ORF2, ORF3, purF, purM, ORF4 genes, complete cds	AB003158 ENA		8169	1705 tax ID	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Corynebacterium ammoniagenes ORF, purN, purH genes, complete cds	AB003159 ENA		3615	1705 tax ID	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Corynebacterium ammoniagenes purD, purB, purC genes, complete cds	AB003161 ENA		4369	1705 tax ID	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Corynebacterium ammoniagenes purorf, purQ, purL genes, complete cds	AB003162 ENA		5101	1705 tax ID	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Corynebacterium ammoniagenes cspA gene for cell surface protein A, complete cds	AB055224 ENA		2323	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes 30S ribosomal protein S1 (rpsA) and glucose permease (ptsG) genes, complete cds	AF045481 ENA		4636	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes ribonucleoside diphosphate reductase small subunit (nrdF) gene, complete cds	AF050168 ENA		1228	1697 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes polyphosphate glucokinase (ppgK) and RNA polymerase major sigma subunit (rpoD) genes, complete cds; and unknown genes	AF326348 ENA		5804	1697 tax ID	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Corynebacterium ammoniagenes promoter DNA sequence	AJ132582 ENA		409	1697 tax ID	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Corynebacterium ammoniagenes partial ORF1 for putative sugar transporter, strain ATCC 6872	AJ504720 ENA		687	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes strain ATCC 6872 ribonucleoside hydrolase 2 (rih2) gene, complete cds	AY603360 ENA		2766	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes strain ATCC 6872 ribonucleoside hydrolase 1 (rih1) gene, complete cds	AY603363 ENA		2257	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes ATCC 6872 NrdE (nrdE) gene, complete cds	AY769914 ENA		2163	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes ribonucleotide reductase large catalytic subunit mutant (nrdE) gene, complete cds	AY788949 ENA		2163	1705 tax ID	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Corynebacterium ammoniagenes gene for FAD synthetase, complete cds	D37967 ENA		1547	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes secreted protein gene, partial cds; and RNA polymerase alpha operon, partial sequence	DQ157860 ENA		3761	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes putative membrane protein gene, complete cds; and RNA polymerase beta, beta' operon, partial sequence	DQ157861 ENA		9851	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes strain ATCC 6872 orotate phosphoribosyltransferase (pyrE) gene, complete cds	EU123869 ENA		623	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes strain ATCC 6872 heat shock protein (hsp60) gene, partial cds	EU249515 ENA		599	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes strain ATCC 6872 transcriptional regulator and 5-carboxymethyl-hydroxymuconate semialdehyde dehydrogenase genes, partial cds	EU249516 ENA		602	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes strain ATCC 6872 5-carboxymethyl-hydroxymuconate semialdehyde dehydrogenase and homoprotocatechulate 2,3-dioxygenase genes, partial cds	EU249517 ENA		603	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes strain ATCC 6872 putative translation elongation factor gene, partial cds	EU249518 ENA		604	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes strain ATCC 6872 putative transcriptional regulator and glyceraldehyde-3-phosphate dehydrogenase genes, partial cds	EU249519 ENA		605	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes strain ATCC 6872 putative transcriptional regulator and cysteine synthase genes, partial cds	EU249520 ENA		606	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes strain ATCC 6872 peptide methionine sulfoxide reductase A and manganese superoxide dismutase genes, partial cds	EU249521 ENA		607	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes strain ATCC 6872 CmaR (cmaR) gene, complete cds	FJ210287 ENA		2203	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes O-acetylhomoserine sulfhydrylase (metY) and homoserine O-acetyltransferase (metX) genes, complete cds	FJ483537 ENA		2786	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes N5,N10-methylenetetrahydrofolate reductase (NADPH) (metF) and methionine synthase (metE) genes, complete cds	FJ483538 ENA		3624	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes cystathionine gamma synthase (metB) gene, complete cds	FJ483539 ENA		1470	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes ferredoxin-sulfite reductase (cysI), ferredoxin like protein (cysX), probable sirohydrochlorin ferrochelatase (cysY), and probable sulfate transporter (cysZ) genes, complete cds	FJ483540 ENA		4509	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes adenosine phosphosulfate reductase (cysH), sulfate adenylyltransferase subunit 2 (cysD), and sulfate adenylyltransferase subunit 1 (cysN) genes, complete cds	FJ483541 ENA		3550	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes cysteine synthase (cysK) and serine O-acetyltransferase (cysE) genes, complete cds	FJ483542 ENA		1936	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes McbR (mcbR) gene, complete cds	FJ483543 ENA		936	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes cystathionine beta lyase (aecD) gene, complete cds	FJ483544 ENA		1482	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes homoserine dehydrogenase (hom) and homoserine kinase (thrB) genes, complete cds	FJ483545 ENA		2595	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium stationis strain ATCC 6872 16S ribosomal RNA gene, partial sequence	FJ648509 ENA	16S	1453	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium stationis strain ATCC 6872 RpoB (rpoB) gene, partial cds	FJ648510 ENA		448	1705 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Corynebacterium ammoniagenes strain ATCC 6872 LuxR type regulator gene, complete cds	GQ412718 ENA		1883	1705 tax ID	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	B.ammoniagenes purK and purE genes	X91189 ENA		2582	1697 tax ID	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Corynebacterium ammoniagenes nrdH, nrdI, nrdE, nrdF genes	Y09572 ENA		6054	1697 tax ID	*

Availability in culture collectionsStrain availability

[Ref.: #8707]

Culture collection no.

DSM 20305, ATCC 6872, IAM 1645, NCTC 2399

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Strain history

<- H.G. Schlegel <- K. Komagata <- ATCC <- NCTC <- J.V. Cook

[Ref.: #20218]

Associated Passport(s) in StrainInfo

164077, 94338, 164078, 94339

References

#8707

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20305

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

* These References are textmined

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