Corynebacterium stationis (DSM 20302, ATCC 14403, CCUG 43497)

Name: Corynebacterium stationis (DSM 20302, ATCC 14403, CCUG 43497)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 3078

Type strain

Strain Designation 622

Culture col. no. DSM 20302 ATCC 14403 CCUG 43497 CIP 104228 JCM 11611 14 more

NCBI tax ID(s) 1705

Special Collections DSMZ CCUG JCM KCTC CIP Wink compendium

History <- H.G. Schlegel <- K. Komagata <- ATCC <- C.E. ZoBell, 622 (Achromobacter stationis) CCM 317 <-- C. E. ZoBell 622. CIP <- 1994, CCTM <- NCIB <- ATCC <- C.E. ZoBell: strain 622, Achromobacter stationis

Links

Corynebacterium stationis 622 is an aerobe, Gram-positive, rod-shaped bacterium that was isolated from seawater.

Gram-positive rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 36066

ATCC 14403,CIP 104228,NCIMB 565,CCM 317,IFO 12144,VKM B-1228,CCRC 11885,CECT 4275,KCTC 3254,CCUG 43497,JCM 11611,NBRC 12144,NBRC 12609,BCRC 11885,VKM Ac-2184,NBIMCC 1435,DSM 20302

@ref 20215

Last LPSN update 2026-02-09 11:18:25

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Corynebacteriaceae

Genus Corynebacterium

Species Corynebacterium stationis

Full scientific name Corynebacterium stationis (ZoBell and Upham 1944) Bernard et al. 2010

Synonyms (2)

Brevibacterium stationis
"Achromobacter stationis"

BacDive ID	Other strains from **Corynebacterium stationis** (5)	Type strain
3079	C. stationis DSM 20305, ATCC 6872, IAM 1645, NCTC 2399, ...
100905	C. stationis ST033372(HKI),
130266	C. stationis G1CH1, DSM 26547
136014	C. stationis CIP 101282, NCIMB 9154, CCUG 43498
158891	C. stationis BL-383-APC-3D, DSM 107248

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
123295	positive	rod-shaped
125438			92
125438	positive		90.588

Colony morphology

@ref	Colony color	Incubation period	Medium used
19791	Sand yellow	10-14 days	ISP 2
19791	Light ivory	10-14 days	ISP 3
19791		10-14 days	ISP 4
19791	Light ivory	10-14 days	ISP 6
19791		10-14 days	ISP 7
123295

Multicellular morphology

@ref	Forms multicellular complex	Medium name
19791		ISP 2
19791		ISP 3
19791		ISP 4
19791		ISP 6
19791		ISP 7

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
19791	ISP 2		Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
19791	ISP 3		Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
19791	ISP 4		Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
19791	ISP 6		Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
19791	ISP 7		Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes
8705	CORYNEBACTERIUM AGAR (DSMZ Medium 53)	Medium recipe at MediaDive	Name: CORYNEBACTERIUM AGAR (DSMZ Medium 53) Composition: Agar 15.0 g/l Casein peptone 10.0 g/l NaCl 5.0 g/l Glucose 5.0 g/l Yeast extract 5.0 g/l Distilled water
34926	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
123295	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
8705	positive	growth	30
19791	positive	optimum	28
34926	positive	growth	30
55900	positive	growth	30
55900	positive	growth	30-37
67770	positive	growth	28
123295	positive	growth	10-41
123295	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
55900	aerobe
123295	facultative anaerobe

Spore formation

@ref	Spore formation	Confidence
125439		90.1

Halophily

@ref	Salt	Growth	Tested relation	Concentration
19791	NaCl	positive	maximum	7.5 %
123295	NaCl	positive	growth	0-10 %

Murein

@ref	Murein short key	Type
8705	A31	A1gamma m-Dpm-direct

Observation

67770

Observationquinones: MK-8(H₂), MK-9(H₂)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
19791	22599 ChEBI	arabinose	-
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
19791	62968 ChEBI	cellulose	-
123295	16947 ChEBI	citrate	-	carbon source
68368	16947 ChEBI	citrate	+	assimilation	from API 20E
68371	18333 ChEBI	D-arabitol	+	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68379	4853 ChEBI	esculin	-	hydrolysis	from API Coryne
123295	4853 ChEBI	esculin	-	hydrolysis
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
19791	28757 ChEBI	fructose	-
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68368	5291 ChEBI	gelatin	+	hydrolysis	from API 20E
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
19791	17234 ChEBI	glucose	+
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
123295	606565 ChEBI	hippurate	+	hydrolysis
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	+	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68368	25094 ChEBI	lysine	-	degradation	from API 20E
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
19791	29864 ChEBI	mannitol	-
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
19791	17268 ChEBI	myo-inositol	+
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
123295	17632 ChEBI	nitrate	+	reduction
123295	17632 ChEBI	nitrate	+	respiration
123295	16301 ChEBI	nitrite	-	reduction
68368	18257 ChEBI	ornithine	-	degradation	from API 20E
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
19791	16634 ChEBI	raffinose	-
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
19791	26546 ChEBI	rhamnose	-
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
19791	17992 ChEBI	sucrose	-
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68368	27897 ChEBI	tryptophan	+	energy source	from API 20E
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68368	16199 ChEBI	urea	+	hydrolysis	from API 20E
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid
19791	18222 ChEBI	xylose	-

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
123295	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
123295	35581 ChEBI	indole
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test	Indole test
123295	15688 ChEBI	acetoin	-
68368	15688 ChEBI	acetoin	-			from API 20E
123295	17234 ChEBI	glucose		-
68368	35581 ChEBI	indole			+	from API 20E

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
123295	alcohol dehydrogenase	-	1.1.1.1
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68379	alpha-glucosidase	-	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
123295	amylase	+
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
68382	beta-galactosidase	-	3.2.1.23	from API zym
123295	beta-galactosidase	-	3.2.1.23
68368	beta-galactosidase	-	3.2.1.23	from API 20E
68382	beta-glucosidase	-	3.2.1.21	from API zym
68379	beta-glucosidase	-	3.2.1.21	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
123295	caseinase	-	3.4.21.50
123295	catalase	+	1.11.1.6
68379	catalase	+	1.11.1.6	from API Coryne
68382	cystine arylamidase	-	3.4.11.3	from API zym
123295	DNase	-
68382	esterase lipase (C 8)	+		from API zym
123295	gamma-glutamyltransferase	-	2.3.2.2
123295	gelatinase	-
68368	gelatinase	+		from API 20E
123295	lecithinase	-
123295	lipase	-
68382	lipase (C 14)	-		from API zym
123295	lysine decarboxylase	-	4.1.1.18
68368	lysine decarboxylase	-	4.1.1.18	from API 20E
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
123295	ornithine decarboxylase	-	4.1.1.17
68368	ornithine decarboxylase	-	4.1.1.17	from API 20E
123295	oxidase	+
123295	phenylalanine ammonia-lyase	-	4.3.1.24
123295	tryptophan deaminase	-
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
123295	tween esterase	+
123295	urease	+	3.5.1.5
68368	urease	+	3.5.1.5	from API 20E

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	denitrification	100	2 of 2
66794	ppGpp biosynthesis	100	4 of 4
66794	gallate degradation	100	5 of 5
66794	adipate degradation	100	2 of 2
66794	acetate fermentation	100	4 of 4
66794	formaldehyde oxidation	100	3 of 3
66794	coenzyme A metabolism	100	4 of 4
66794	aspartate and asparagine metabolism	100	9 of 9
66794	ethanol fermentation	100	2 of 2
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	folate polyglutamylation	100	1 of 1
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	methylglyoxal degradation	100	5 of 5
66794	phenylacetate degradation (aerobic)	100	5 of 5
66794	vitamin B1 metabolism	92.31	12 of 13
66794	starch degradation	90	9 of 10
66794	threonine metabolism	90	9 of 10
66794	chorismate metabolism	88.89	8 of 9
66794	CO2 fixation in Crenarchaeota	88.89	8 of 9
66794	valine metabolism	88.89	8 of 9
66794	peptidoglycan biosynthesis	86.67	13 of 15
66794	palmitate biosynthesis	86.36	19 of 22
66794	photosynthesis	85.71	12 of 14
66794	phenylalanine metabolism	84.62	11 of 13
66794	glycolate and glyoxylate degradation	83.33	5 of 6
66794	pentose phosphate pathway	81.82	9 of 11
66794	lipoate biosynthesis	80	4 of 5
66794	flavin biosynthesis	80	12 of 15
66794	glycogen metabolism	80	4 of 5
66794	myo-inositol biosynthesis	80	8 of 10
66794	vitamin K metabolism	80	4 of 5
66794	phenol degradation	80	16 of 20
66794	heme metabolism	78.57	11 of 14
66794	NAD metabolism	77.78	14 of 18
66794	molybdenum cofactor biosynthesis	77.78	7 of 9
66794	serine metabolism	77.78	7 of 9
66794	C4 and CAM-carbon fixation	75	6 of 8
66794	gluconeogenesis	75	6 of 8
66794	glutamate and glutamine metabolism	75	21 of 28
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	ketogluconate metabolism	75	6 of 8
66794	glycogen biosynthesis	75	3 of 4
66794	sulfopterin metabolism	75	3 of 4
66794	isoleucine metabolism	75	6 of 8
66794	biotin biosynthesis	75	3 of 4
66794	butanoate fermentation	75	3 of 4
66794	metabolism of disaccharids	72.73	8 of 11
66794	proline metabolism	72.73	8 of 11
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	reductive acetyl coenzyme A pathway	71.43	5 of 7
66794	propanol degradation	71.43	5 of 7
66794	citric acid cycle	71.43	10 of 14
66794	glycolysis	70.59	12 of 17
66794	urea cycle	69.23	9 of 13
66794	purine metabolism	68.09	64 of 94
66794	enterobactin biosynthesis	66.67	2 of 3
66794	octane oxidation	66.67	2 of 3
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	d-mannose degradation	66.67	6 of 9
66794	acetoin degradation	66.67	2 of 3
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	alanine metabolism	65.52	19 of 29
66794	histidine metabolism	65.52	19 of 29
66794	methionine metabolism	65.38	17 of 26
66794	pyrimidine metabolism	64.44	29 of 45
66794	tetrahydrofolate metabolism	64.29	9 of 14
66794	oxidative phosphorylation	62.64	57 of 91
66794	arginine metabolism	62.5	15 of 24
66794	dTDPLrhamnose biosynthesis	62.5	5 of 8
66794	degradation of sugar alcohols	62.5	10 of 16
66794	isoprenoid biosynthesis	61.54	16 of 26
66794	leucine metabolism	61.54	8 of 13
66794	lipid metabolism	61.29	19 of 31
66794	tryptophan metabolism	60.53	23 of 38
66794	metabolism of amino sugars and derivatives	60	3 of 5
66794	4-hydroxyphenylacetate degradation	60	6 of 10
66794	3-chlorocatechol degradation	60	3 of 5
66794	3-phenylpropionate degradation	60	9 of 15
66794	propionate fermentation	60	6 of 10
66794	lysine metabolism	59.52	25 of 42
66794	androgen and estrogen metabolism	56.25	9 of 16
66794	cysteine metabolism	55.56	10 of 18
66794	4-hydroxymandelate degradation	55.56	5 of 9
66794	degradation of pentoses	53.57	15 of 28
66794	kanosamine biosynthesis II	50	1 of 2
66794	Entner Doudoroff pathway	50	5 of 10
66794	pantothenate biosynthesis	50	3 of 6
66794	cis-vaccenate biosynthesis	50	1 of 2
66794	resorcinol degradation	50	1 of 2
66794	CMP-KDO biosynthesis	50	2 of 4
66794	quinate degradation	50	1 of 2
66794	dolichol and dolichyl phosphate biosynthesis	50	1 of 2
66794	tyrosine metabolism	50	7 of 14
66794	non-pathway related	50	19 of 38
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	phenylmercury acetate degradation	50	1 of 2
66794	lipid A biosynthesis	44.44	4 of 9
66794	glutathione metabolism	42.86	6 of 14
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	carotenoid biosynthesis	40.91	9 of 22
66794	glycine betaine biosynthesis	40	2 of 5
66794	glycine metabolism	40	4 of 10
66794	degradation of hexoses	38.89	7 of 18
66794	sulfate reduction	38.46	5 of 13
66794	vitamin B6 metabolism	36.36	4 of 11
66794	d-xylose degradation	36.36	4 of 11
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	nitrate assimilation	33.33	3 of 9
66794	cyanate degradation	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	coenzyme M biosynthesis	30	3 of 10
66794	ubiquinone biosynthesis	28.57	2 of 7
66794	arachidonic acid metabolism	27.78	5 of 18
66794	lactate fermentation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	daunorubicin biosynthesis	22.22	2 of 9

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
19791	-	-	-	-	+	-	+	-	+	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
19791	-	-	+	-	+	+	-	-	-	-	+	not determinedn.d.	-	-	-	-	-	-	+	-	not determinedn.d.
55900	+	+	-	+	-	-	-	-	-	+	-	-	+	+	-	-	-	-	-	-	+

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
19791	not determinedn.d.	+	-	+	-	+	+	-	-	-	-	+	-	-	-	-	-	-	-	-
55900	-	-	+	+	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-
123295	-	+	+	+	-	+	-	-	+	-	-	+	-	-	-	-	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
123295	not determinedn.d.	-	-	+/-	-	+	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
123295	not determinedn.d.	+	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	+	-	-	+	-	+	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	+	+	+	-	+	-	-	-	-	-	-	-	+	-	-	-	-	-	+	-	-	+	-	-	+	-	+	-	-	-	+	+	-	-	-	-	+	+	-	-	-	+	+	+	+	+	-	+	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type
8705	seawater
55900	Film of marine fouling organisms
67770	Film of marine-fouling organisms
123295	Film of marine fouling organisms

Taxonmaps

69479

Global distribution of 16S sequence FJ172667 (>99% sequence identity) for Corynebacterium stationis subclade from Microbeatlas

Aquatic Samples	368
Soil Samples	533
Animal Samples	6752
Plant Samples	171
Total Samples	7824

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
19791		1	Hazard group According to TRBA 466
8705	yes, in single cases	1	Risk group (German classification) According to TRBA 466
123295		2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	IMG accession	NCBI tax ID	Score
66792	ASM194134v1 assembly for Corynebacterium stationis 622=DSM 20302	complete	GCA_001941345	2623620535	1705	98.79

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
8705	Corynebacterium stationis strain ATCC 14403 16S ribosomal RNA gene, partial sequence	FJ172667	1447	1705
67770	Brevibacterium stationis partial 16S rRNA gene, type strain LMG 21670T	AJ620367	1475	1705
124043	Corynebacterium stationis strain DSM 20302(T) 16S ribosomal RNA gene, partial sequence.	MN686693	404	1705

GC content

@ref	GC-content (mol%)	Method
8705	53.9
67770	53.9	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Corynebacterium stationis 622=DSM 20302
NCBI: GCA_001941345

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	90.10	no
125439	motility	BacteriaNetⓘ	no	72.20	no
125439	gram_stain	BacteriaNetⓘ	positive	72.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	79.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Corynebacterium stationis 622=DSM 20302
NCBI: GCA_001941345.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.59	no
125438	anaerobic	anaerobicⓘ	no	94.26	yes
125438	aerobic	aerobicⓘ	yes	70.75	no
125438	spore-forming	spore-formingⓘ	no	77.79	no
125438	thermophilic	thermophileⓘ	no	93.50	yes
125438	flagellated	motile2+ⓘ	no	92.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	A 16S rRNA Gene and Draft Genome Database for the Murine Oral Bacterial Community.	Joseph S, Aduse-Opoku J, Hashim A, Hanski E, Streich R, Knowles SCL, Pedersen AB, Wade WG, Curtis MA.	mSystems	10.1128/msystems.01222-20	2021
	Update of the list of qualified presumption of safety (QPS) recommended microbiological agents intentionally added to food or feed as notified to EFSA 22: Suitability of taxonomic units notified to EFSA until March 2025.	EFSA Panel on Biological Hazards (BIOHAZ), Allende A, Alvarez-Ordonez A, Bortolaia V, Bover-Cid S, De Cesare A, Dohmen W, Guillier L, Jacxsens L, Nauta M, Mughini-Gras L, Ottoson J, Peixe L, Perez-Rodriguez F, Skandamis P, Suffredini E, Cocconcelli PS, Fernandez Escamez PS, Maradona MP, Querol A, Sijtsma L, Suarez JE, Chemaly M, Sundh I, Barizzone F, Dastouet J, Doyle N, Correia S, Herman L.	EFSA J	10.2903/j.efsa.2025.9510	2025
	Update of the list of QPS-recommended biological agents intentionally added to food or feed as notified to EFSA 14: suitability of taxonomic units notified to EFSA until March 2021.	EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis K, Allende A, Alvarez-Ordonez A, Bolton D, Bover-Cid S, Chemaly M, Davies R, De Cesare A, Hilbert F, Lindqvist R, Nauta M, Peixe L, Ru G, Simmons M, Skandamis P, Suffredini E, Cocconcelli PS, Fernandez Escamez PS, Prieto-Maradona M, Querol A, Sijtsma L, Suarez JE, Sundh I, Vlak J, Barizzone F, Hempen M, Herman L.	EFSA J	10.2903/j.efsa.2021.6689	2021
Enzymology	Characterization of the microbiota in the guts of Triatoma brasiliensis and Triatoma pseudomaculata infected by Trypanosoma cruzi in natural conditions using culture independent methods.	Gumiel M, da Mota FF, Rizzo Vde S, Sarquis O, de Castro DP, Lima MM, Garcia Ede S, Carels N, Azambuja P.	Parasit Vectors	10.1186/s13071-015-0836-z	2015
	The progressive shift in anaerobic digestion communities under extreme propionate levels led to a redundant microbiome capable of producing methane.	Ochoa-Bernal TG, Huber DH, Espinosa-Solares T.	J Environ Manage	10.1016/j.jenvman.2025.127698	2025
	Deciphering the Transformed bacterial ocular surface microbiome in diabetic mice and its Consequential influence on corneal wound healing restoration.	Wang H, Xue J, Song Y, Li D, Wei C, Wan L.	Exp Eye Res	10.1016/j.exer.2025.110350	2025
Genetics	Development of a CRISPR/Cas9 genome editing toolbox for Corynebacterium stationis and its application in hypoxanthine biosynthesis.	Ouyang Z, Zhang X, Hou X, Huang J, Lin Y, Zheng S.	Synth Syst Biotechnol	10.1016/j.synbio.2025.06.010	2025
	Transgenerational Cold Acclimation and Contribution of Gut Bacteria in Spodoptera frugiperda.	Song Y, Yu GY, Gao W, Mai YT, Xu J, Fu W, Zhang ZX.	Insects	10.3390/insects16101052	2025
	Measuring the Migration and Biofilm Formation of Various Bacteria.	Ma Y, Hasan Z, Huang J, Chen J, Ho CL.	J Vis Exp	10.3791/63595	2022
	Comparison of automatic methods MALDI-TOF, VITEK2 and manual methods for the identification of intestinal microbial communities on the example of samples from alpacas (Vicugna pacos).	Plawinska-Czarnak J, Wodz K, Strzalkowska Z, Zychska M, Nowak T, Kwiecinski A, Kwiecinski P, Bielecki W, Rodo A, Rzewuska M, Klosinska D, Anusz K, Orlowska B.	J Vet Res	10.2478/jvetres-2023-0051	2023
	Mutational analysis in Corynebacterium stationis MFS transporters for improving nucleotide bioproduction.	Kinose K, Shinoda K, Konishi T, Kawasaki H.	Appl Microbiol Biotechnol	10.1007/s00253-024-13080-y	2024
Phylogeny	Alterations to the bovine bacterial ocular surface microbiome in the context of infectious bovine keratoconjunctivitis.	Gafen HB, Liu CC, Ineck NE, Scully CM, Mironovich MA, Taylor CM, Luo M, Leis ML, Scott EM, Carter RT, Hernke DM, Paul NC, Lewin AC.	Anim Microbiome	10.1186/s42523-023-00282-4	2023
Pathogenicity	Effects of oral sialic acid on gut development, liver function and gut microbiota in mice.	Ma J, Gong S, He Y, Gao W, Hao W, Lan X.	Lett Appl Microbiol	10.1111/lam.13447	2021
	Four Dairy Products Mitigates Sarcopenia in Mice by Modulating Muscle Inflammation, Autophagy, and Protein Degradation.	Sun M, Wu T, Wang R, Ma Y, Han Y, Hou Y, Zhang Z.	Food Sci Nutr	10.1002/fsn3.70540	2025
	Hesperidin and Fecal Microbiota Transplantation Modulate the Composition of the Gut Microbiota and Reduce Obesity in High Fat Diet Mice.	Liu T, Lei C, Huang Q, Song W, Li C, Sun N, Liu Z.	Diabetes Metab Syndr Obes	10.2147/dmso.s474034	2024
	A partially automated method for DNA extraction from marmoset hair follicles to avoid blood chimerism.	Stendahl AM, Zhang Q, Lima AC, Mello C, Nemesh J, Peterson S, Castro J, Celino-Brady FT, Ray K, Gao X, Hou Y, Shen C, Vigh-Conrad KA, Krienen F, Feng G, McCarroll SA, Conrad DF, Del Rosario RCH.	Front Genet	10.3389/fgene.2025.1608504	2025
	Antibacterial Activity of Halophilic Bacteria Against Drug-Resistant Microbes Associated with Diabetic Foot Infections.	Henciya S, Vengateshwaran TD, Gokul MS, Dahms HU, James RA.	Curr Microbiol	10.1007/s00284-020-02190-1	2020
Phylogeny	Longitudinal survey of total airborne bacterial and archaeal concentrations and bacterial diversity in enriched colony housing and aviaries for laying hens.	St-Germain MW, Letourneau V, Cruaud P, Lemaille C, Robitaille K, Denis E, Boulianne M, Duchaine C.	Poult Sci	10.1016/j.psj.2024.104119	2024
Genetics	Diet-induced changes in the jejunal microbiota of developing broilers reduce the abundance of Enterococcus hirae and Enterococcus faecium.	Stege PB, Schokker D, Harders F, Kar SK, Stockhofe N, Perricone V, Rebel JMJ, de Jong IC, Bossers A.	BMC Genomics	10.1186/s12864-024-10496-8	2024
	Beneficial Effects of Probiotic Lactobacillus paraplantarum BGCG11 on Pancreatic and Duodenum Function in Diabetic Rats.	Mihailovic M, Sokovic Bajic S, Arambasic Jovanovic J, Brdaric E, Dinic S, Grdovic N, Uskokovic A, Rajic J, Dordevic M, Tolinacki M, Golic N, Zivkovic M, Vidakovic M.	Int J Mol Sci	10.3390/ijms25147697	2024
	Decoding oral leukoplakia: microbiome dysbiosis and inflammatory dynamics unveiled in a rat model.	Sang Z, Zhang Y, Kao E, Zhu T, Yang J, Xu ZZ, Huang S, Teng F, Wang W.	Front Microbiol	10.3389/fmicb.2025.1613165	2025
	Typeability of MALDI-TOF assay for identification of non-aureus staphylococci associated with bovine intramammary infections and teat apex colonization.	Mahmmod YS, Nonnemann B, Svennesen L, Pedersen K, Klaas IC.	J Dairy Sci	10.3168/jds.2018-14579	2018
	Diversity and Functional Potential of Gut Bacteria Associated with the Insect Arsenura armida (Lepidoptera: Saturniidae).	Lopez-Hernandez MG, Rincon-Rosales R, Rincon-Molina CI, Manzano-Gomez LA, Gen-Jimenez A, Maldonado-Gomez JC, Rincon-Molina FA.	Insects	10.3390/insects16070711	2025
	Sevoflurane-induced gut microbiota dysbiosis drives adolescent neurobehavioral deficits in neonatal rats: Protective role of eicosapentaenoic acid.	Fan P, Wang K, Wei H, Yang L, Zhang S, Cheng Y, Li C, Zhang Y, Jia P, Zhang Y, Xun Y, Wang Y, Yang P, Zhang P, Wang N.	iScience	10.1016/j.isci.2025.113657	2025
	Metabarcoding analysis of the microbiota in flocks naturally infected by Coxiella burnetii: First description of the global microbiota in domestic small ruminants.	Toledo-Perona R, Gomez-Martin A, Contreras A, Toquet M, Quereda JJ, Esnal A, Gonzalez-Torres P, Gomis J.	One Health	10.1016/j.onehlt.2025.100996	2025
Pathogenicity	Impact of Early-Life Brain Injury on Gut Microbiota Composition in Rodents: Systematic Review with Implications for Neurodevelopment.	Souza VDS, Manhaes-de-Castro R, Pereira SDC, de Silveira BS, Calado CMSDS, Gouveia HJCB, Coq JO, Toscano AE.	Cells	10.3390/cells14141063	2025
	Multi-omics analysis reveals the mechanism of Lactobacillus plantarum in alleviating metabolic disorders in type 2 diabetic mice through the gut-liver axis.	Zhang C, Gao Y, Huang Y, Qin Y, Li Y, Chen Q, Wu T, Zhang Y, Zhang Y, Deng D, Huang B, Chen M, Han M.	mSystems	10.1128/msystems.00965-25	2025
Phylogeny	Is Intestinal Microbiota Fully Restored After Chickens Have Recovered from Coccidiosis?	Guo J, Zhao Z, Broadwater C, Tobin I, Liu J, Whitmore M, Zhang G.	Pathogens	10.3390/pathogens14010081	2025
	Correlation of distribution characteristics and dynamic changes of gut microbiota with the efficacy of immunotherapy in EGFR-mutated non-small cell lung cancer.	Luo WC, Mei SQ, Huang ZJ, Chen ZH, Zhang YC, Yang MY, Liu JQ, Xu JY, Yang XR, Zhong RW, Tang LB, Yin LX, Deng Y, Peng YL, Lu C, Chen BL, Ke DX, Tu HY, Yang JJ, Xu CR, Wu YL, Zhou Q.	J Transl Med	10.1186/s12967-024-05135-5	2024
	Gut Microbiota Feature of Senile Osteoporosis by Shallow Shotgun Sequencing Using Aged Rats Model.	Wang N, Ma S, Fu L.	Genes (Basel)	10.3390/genes13040619	2022
	Can infectious omphalitis in piglets be clinically diagnosed during the first three days of life?	Blirup-Plum SA, Jensen HE, Hartmann KT, Nielsen SS, Pankoke K, Hansen MS, Pedersen KS, Larsen I, Nielsen JP, Olsen JE, Kudirkiene E, Braunstein TH, Barington K.	BMC Vet Res	10.1186/s12917-025-04507-3	2025
Genetics	Complete genome sequence of nucleoside producing strain Corynebacterium stationis ATCC 6872.	Liu Y, Yang J, Jiang Y, Yang S.	J Biotechnol	10.1016/j.jbiotec.2016.03.026	2016
	Effects of Dietary Omega-3 Enrichment on the Chemical Composition and the Pathogenic Microbiota of Ovine Milk.	Tzora A, Voidarou CC, Giannenas I, Bonos E, Fotou K, Nelli A, Grigoriadou K, Karamoutsios A, Basdagianni Z, Dokou S, Tsinas A, Skoufos I.	Foods	10.3390/foods11223736	2022
	Safety and efficacy of IMP (disodium 5'-inosinate) produced by fermentation with Corynebacterium stationis KCCM 80161 for all animal species.	EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Bampidis V, Azimonti G, Bastos ML, Christensen H, Dusemund B, Kouba M, Kos Durjava M, Lopez-Alonso M, Lopez Puente S, Marcon F, Mayo B, Pechova A, Petkova M, Ramos F, Ramos F, Sanz Y, Villa RE, Woutersen R, Cocconcelli PS, Glandorf B, Herman L, Prieto Maradona M, Saarela M, Tosti L, Anguita M, Galobart J, Holczknecht O, Manini P, Pizzo F, Tarres-Call J, Pettenati E.	EFSA J	10.2903/j.efsa.2020.6140	2020
	Effects of dietary copper intake on blood lipids in women of childbearing age and the potential role of gut microbiota.	Luo M, Guo L, Wu C, Hao M, Gu J, Li X, Wang Q.	Front Nutr	10.3389/fnut.2024.1368730	2024
	Probiotic supplementation as an alternative to antibiotics in broiler chickens.	Tomczyk G, Niczyporuk JS, Kozdrun W, Sawicka-Durkalec A, Bocian L, Barabasz M, Michalski M.	J Vet Res	10.2478/jvetres-2024-0009	2024
	Modulation of Gut Microbial Community and Metabolism by Bacillus licheniformis HD173 Promotes the Growth of Nursery Piglets Model.	Li J, Tian C, Feng S, Cheng W, Tao S, Li C, Xiao Y, Wei H.	Nutrients	10.3390/nu16101497	2024
Genetics	The crosstalk between microbiota and metabolites in AP mice: an analysis based on metagenomics and untargeted metabolomics.	Zhou Q, Tao X, Guo F, Zhu Y, Wu Y, Xiang H, Shang D.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1134321	2023
Phylogeny	Unique hyper-thermal composting process in Kagoshima City forms distinct bacterial community structures.	Tashiro Y, Tabata H, Itahara A, Shimizu N, Tashiro K, Sakai K.	J Biosci Bioeng	10.1016/j.jbiosc.2016.04.006	2016
	Sleep deprivation-induced anxiety-like behaviors are associated with alterations in the gut microbiota and metabolites.	Zhang N, Gao X, Li D, Xu L, Zhou G, Xu M, Peng L, Sun G, Pan F, Li Y, Ren R, Huang R, Yang Y, Wang Z.	Microbiol Spectr	10.1128/spectrum.01437-23	2024
	Microbiota Survey of Sliced Cooked Ham During the Secondary Shelf Life.	Spampinato G, Candeliere F, Amaretti A, Licciardello F, Rossi M, Raimondi S.	Front Microbiol	10.3389/fmicb.2022.842390	2022
	Effect of sodium bisulfate amendments on bacterial populations in broiler litter.	Joerger RD, Ganguly A, de Los Santos M, Li H.	Poult Sci	10.1016/j.psj.2020.08.013	2020
Genetics	The multi-kingdom microbiome catalog of the chicken gastrointestinal tract.	Wang Y, Qu M, Bi Y, Liu WJ, Ma S, Wan B, Hu Y, Zhu B, Zhang G, Gao GF.	Biosaf Health	10.1016/j.bsheal.2024.02.006	2024
	Update of the list of QPS-recommended biological agents intentionally added to food or feed as notified to EFSA 11: suitability of taxonomic units notified to EFSA until September 2019.	EFSA Panel on Biological Hazards (BIOHAZ), Koutsoumanis K, Allende A, Alvarez-Ordonez A, Bolton D, Bover-Cid S, Chemaly M, Davies R, De Cesare A, Hilbert F, Lindqvist R, Nauta M, Peixe L, Ru G, Simmons M, Skandamis P, Suffredini E, Cocconcelli PS, Fernandez Escamez PS, Maradona MP, Querol A, Suarez JE, Sundh I, Vlak J, Barizzone F, Correia S, Herman L.	EFSA J	10.2903/j.efsa.2020.5965	2020
	Assessing the effects of a mixed Eimeria spp. challenge on performance, intestinal integrity, and the gut microbiome of broiler chickens.	Graham D, Petrone-Garcia VM, Hernandez-Velasco X, Coles ME, Juarez-Estrada MA, Latorre JD, Chai J, Shouse S, Zhao J, Forga AJ, Senas-Cuesta R, Laverty L, Martin K, Trujillo-Peralta C, Loeza I, Gray LS, Hargis BM, Tellez-Isaias G.	Front Vet Sci	10.3389/fvets.2023.1224647	2023
Phylogeny	The relationship between menopausal syndrome and gut microbes.	Liu Y, Zhou Y, Mao T, Huang Y, Liang J, Zhu M, Yao P, Zong Y, Lang J, Zhang Y.	BMC Womens Health	10.1186/s12905-022-02029-w	2022
Phylogeny	Effect of Doxycycline Use in the Early Broiler Production Cycle on the Microbiome.	Greene G, Koolman L, Whyte P, Burgess C, Lynch H, Coffey A, Lucey B, O'Connor L, Bolton D.	Front Microbiol	10.3389/fmicb.2022.885862	2022
	Venom Function of a New Species of Megalomyrmex Forel, 1885 (Hymenoptera: Formicidae).	Sozanski K, Prado LPD, Mularo AJ, Sadowski VA, Jones TH, Adams RMM.	Toxins (Basel)	10.3390/toxins12110679	2020
	Revealing microbial consortia that interfere with grapevine downy mildew through microbiome epidemiology.	Fournier P, Pellan L, Jaswa A, Cambon MC, Chataigner A, Bonnard O, Raynal M, Debord C, Poeydebat C, Labarthe S, Delmotte F, This P, Vacher C.	Environ Microbiome	10.1186/s40793-025-00691-9	2025
Pathogenicity	Investigation of the relationship between inflammation and microbiota in the intestinal tissue of female and male rats fed with fructose: Modulatory role of metformin.	Yalcin Bugdayci A, Akarca Dizakar SO, Demirel MA, Omeroglu S, Akar F, Uludag MO.	Daru	10.1007/s40199-024-00521-2	2024
Genetics	Bacillus subtilis and Macleaya cordata extract regulate the rumen microbiota associated with enteric methane emission in dairy cows.	Jia P, Dong LF, Tu Y, Diao QY.	Microbiome	10.1186/s40168-023-01654-3	2023
	Alterations in gut microbiota of abdominal aortic aneurysm mice.	Xie J, Lu W, Zhong L, Hu Y, Li Q, Ding R, Zhong Z, Liu Z, Xiao H, Xie D, Zheng G, Ye B, Zhong Y, Liu Z.	BMC Cardiovasc Disord	10.1186/s12872-020-01334-2	2020
	Potential Benefits of Epidermal Growth Factor for Inhibiting Muscle Degrative Markers in Rats with Alcoholic Liver Damage.	Xiao Q, Chen YH, Chen YL, Chien YS, Hsieh LH, Shirakawa H, Yang SC.	Int J Mol Sci	10.3390/ijms24108845	2023
Phylogeny	Role of Williamsia and Segniliparus in human infections with the approach taxonomy, cultivation, and identification methods.	Fatahi-Bafghi M.	Ann Clin Microbiol Antimicrob	10.1186/s12941-021-00416-z	2021
Metabolism	Tang-Ping-San Decoction Remodel Intestinal Flora and Barrier to Ameliorate Type 2 Diabetes Mellitus in Rodent Model.	Yin W, Zhang SQ, Pang WL, Chen XJ, Wen J, Hou J, Wang C, Song LY, Qiu ZM, Liang PT, Yuan JL, Yang ZS, Yang ZS, Bian Y.	Diabetes Metab Syndr Obes	10.2147/dmso.s375572	2022
Metabolism	Integrated analysis of multi-tissues lipidome and gut microbiome reveals microbiota-induced shifts on lipid metabolism in pigs.	Xie C, Zhu X, Xu B, Niu Y, Zhang X, Ma L, Yan X.	Anim Nutr	10.1016/j.aninu.2022.04.011	2022
	Zunyimycin C enhances immunity and improves cognitive impairment and its mechanism.	Wang X, Li Z, Sun R, Li X, Guo R, Cui X, Liu B, Li W, Yang Y, Huang X, Qu H, Liu C, Wang Z, Lu Y, Yue C.	Front Cell Infect Microbiol	10.3389/fcimb.2022.1081243	2022
	Akkermansia muciniphila Alters Gut Microbiota and Immune System to Improve Cardiovascular Diseases in Murine Model.	He X, Bai Y, Zhou H, Wu K.	Front Microbiol	10.3389/fmicb.2022.906920	2022
Genetics	Fecal Metaproteomic Analysis Reveals Unique Changes of the Gut Microbiome Functions After Consumption of Sourdough Carasau Bread.	Abbondio M, Palomba A, Tanca A, Fraumene C, Pagnozzi D, Serra M, Marongiu F, Laconi E, Uzzau S.	Front Microbiol	10.3389/fmicb.2019.01733	2019
	The influences of low protein diet on the intestinal microbiota of mice.	Masuoka H, Suda W, Tomitsuka E, Shindo C, Takayasu L, Horwood P, Greenhill AR, Hattori M, Umezaki M, Hirayama K.	Sci Rep	10.1038/s41598-020-74122-9	2020
	Differential Analysis of Longitudinal Methicillin-Resistant Staphylococcus aureus Colonization in Relation to Microbial Shifts in the Nasal Microbiome of Neonatal Piglets.	Patel S, Vlasblom AA, Verstappen KM, Zomer AL, Fluit AC, Rogers MRC, Wagenaar JA, Claesson MJ, Duim B.	mSystems	10.1128/msystems.00152-21	2021
	A Novel Role of SLC26A3 in the Maintenance of Intestinal Epithelial Barrier Integrity.	Kumar A, Priyamvada S, Ge Y, Jayawardena D, Singhal M, Anbazhagan AN, Chatterjee I, Dayal A, Patel M, Zadeh K, Saksena S, Alrefai WA, Gill RK, Zadeh M, Zhao N, Mohamadzadeh M, Dudeja PK.	Gastroenterology	10.1053/j.gastro.2020.11.008	2021
	Little cigars and cigarillos harbor diverse bacterial communities that differ between the tobacco and the wrapper.	Chattopadhyay S, Smyth EM, Kulkarni P, Babik KR, Reid M, Hittle LE, Clark PI, Mongodin EF, Sapkota AR.	PLoS One	10.1371/journal.pone.0211705	2019
Metabolism	Genome-based selection and application of food-grade microbes for chickpea milk fermentation towards increased L-lysine content, elimination of indigestible sugars, and improved flavour.	Tangyu M, Fritz M, Aragao-Borner R, Ye L, Bogicevic B, Bolten CJ, Wittmann C.	Microb Cell Fact	10.1186/s12934-021-01595-2	2021
	Host circadian behaviors exert only weak selective pressure on the gut microbiome under stable conditions but are critical for recovery from antibiotic treatment.	Zhao C, Kelly K, Jabbur ML, Paguaga M, Behringer M, Johnson CH.	PLoS Biol	10.1371/journal.pbio.3001865	2022
	Diversity, distribution, and antagonistic activities of rhizobacteria of Panax notoginseng.	Fan ZY, Miao CP, Qiao XG, Zheng YK, Chen HH, Chen YW, Xu LH, Zhao LX, Guan HL.	J Ginseng Res	10.1016/j.jgr.2015.05.003	2016
Phylogeny	Characterization of Bacterial Communities in Selected Smokeless Tobacco Products Using 16S rDNA Analysis.	Tyx RE, Stanfill SB, Keong LM, Rivera AJ, Satten GA, Watson CH.	PLoS One	10.1371/journal.pone.0146939	2016
Genetics	Quantifying and Understanding Well-to-Well Contamination in Microbiome Research.	Minich JJ, Sanders JG, Amir A, Humphrey G, Gilbert JA, Knight R.	mSystems	10.1128/msystems.00186-19	2019
Phylogeny	Colonization of the human gut by bovine bacteria present in Parmesan cheese.	Milani C, Duranti S, Napoli S, Alessandri G, Mancabelli L, Anzalone R, Longhi G, Viappiani A, Mangifesta M, Lugli GA, Bernasconi S, Ossiprandi MC, van Sinderen D, Ventura M, Turroni F.	Nat Commun	10.1038/s41467-019-09303-w	2019
Metabolism	An Alternative and Conserved Cell Wall Enzyme That Can Substitute for the Lipid II Synthase MurG.	Zhang L, Ramijan K, Carrion VJ, van der Aart LT, Willemse J, van Wezel GP, Claessen D.	mBio	10.1128/mbio.03381-20	2021
Phylogeny	Assignment of Brevibacterium stationis (ZoBell and Upham 1944) Breed 1953 to the genus Corynebacterium, as Corynebacterium stationis comb. nov., and emended description of the genus Corynebacterium to include isolates that can alkalinize citrate.	Bernard KA, Wiebe D, Burdz T, Reimer A, Ng B, Singh C, Schindle S, Pacheco AL	Int J Syst Evol Microbiol	10.1099/ijs.0.012641-0	2009
Genetics	Identification of plasmid partition function in coryneform bacteria.	Kurusu Y, Satoh Y, Inui M, Kohama K, Kobayashi M, Terasawa M, Yukawa H	Appl Environ Microbiol	10.1128/aem.57.3.759-764.1991	1991

References

#8705	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20302
#19791	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#34926	; Curators of the CIP;
#55900	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 43497
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68368	Automatically annotated from API 20E .
#68371	Automatically annotated from API 50CH acid .
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#123295	Collection of Institut Pasteur ; Curators of the CIP; CIP 104228
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Corynebacterium stationis (DSM 20302, ATCC 14403, CCUG 43497)

Name and taxonomic classification

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Murein

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API 20E

API coryne

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