Flavobacterium lacicola (KCTC 52571, NBRC 112883, IMCC 25901)

Name: Flavobacterium lacicola (KCTC 52571, NBRC 112883, IMCC 25901)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 158799

Type strain

Culture col. no. KCTC 52571 NBRC 112883 IMCC 25901

NCBI tax ID(s) 2026655

Special Collections KCTC Literature strains

History <- Jang-Cheon Cho, Inha Univ.

Links

Flavobacterium lacicola KCTC 52571 is an aerobe, Gram-negative, rod-shaped prokaryote that forms circular colonies and was isolated from oligotrophic freshwater lake.

Gram-negative rod-shaped colony-forming aerobe 16S sequence

Name and taxonomic classification

SI-ID 27739

KCTC 52571,NBRC 112883

@ref 20215

Last LPSN update 2026-02-09 11:38:25

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Flavobacterium

Species Flavobacterium lacicola

Full scientific name Flavobacterium lacicola Park et al. 2018

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape
65559	negative	1.0-1.5 µm	0.3-0.6 µm	rod-shaped
67771				rod-shaped
67771	negative

Colony morphology

@ref	Colony color	Colony shape	Incubation period	Medium used
65559	orange	circular	5 days	R2A

Pigmentation

@ref	Production	Name
65559		carotenoid pigment

Culture and growth conditions

Culture medium

@ref	Name	Growth
65559	Reasoner's 2A agar (R2A)

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
65559	positive	growth	10-30
65559	positive	optimum	20	psychrophilic
67771	positive	growth	25	mesophilic

Culture pH

@ref	Ability	Type	PH
65559	positive	optimum	7
65559	positive	growth	6-8

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
65559	aerobe
67771	aerobe

Halophily

@ref	Halophily level	Salt	Growth	Tested relation	Concentration
65559		NaCl	positive	growth	0-1.0 %
65559	non-halophilic	NaCl	positive	optimum	0 %

Observation

67771

Observationquinones: MK-6

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
65559	40585 ChEBI	alpha-cyclodextrin	+	oxidation
65559	17925 ChEBI	alpha-D-glucose	+	oxidation
65559	85146 ChEBI	carboxymethylcellulose	+	hydrolysis
65559		casein	-	hydrolysis
65559	17029 ChEBI	chitin	-	hydrolysis
65559	12936 ChEBI	D-galactose	+	oxidation
65559	23652 ChEBI	dextrin	+	oxidation
65559	16991 ChEBI	dna	-	hydrolysis
65559		egg yolk	-	hydrolysis
65559	4853 ChEBI	esculin	+	hydrolysis
65559	5291 ChEBI	gelatin	-	hydrolysis
65559	17234 ChEBI	glucose	-	fermentation
65559	29042 ChEBI	glucose 1-phosphate	+	oxidation
65559	28087 ChEBI	glycogen	+	oxidation
65559	73784 ChEBI	glycyl-l-glutamate	+	oxidation
65559	17716 ChEBI	lactose	+	oxidation
65559	6359 ChEBI	lactulose	+	oxidation
65559	17306 ChEBI	maltose	+	oxidation
65559	17632 ChEBI	nitrate	-	reduction
65559	17309 ChEBI	pectin	+	hydrolysis
65559	28017 ChEBI	starch	+	hydrolysis
65559	53424 ChEBI	tween 20	-	hydrolysis
65559	53426 ChEBI	tween 80	-	hydrolysis
65559	18186 ChEBI	tyrosine	-	hydrolysis
65559	16704 ChEBI	uridine	+	oxidation

Antibiotic resistance

@ref	ChEBI	Metabolite	Sensitivity conc.
65559	28971	ampicillin	10 µg (disc)
65559	17698	chloramphenicol	30 µg (disc)
65559	48923	erythromycin	15 µg (disc)
65559	17833	gentamicin	10 µg (disc)
65559	6104	kanamycin	10 µg (disc)
65559	100147	nalidixic acid	30 µg (disc)
65559	28077	rifampicin	5 µg (disc)
65559	27902	tetracycline	30 µg (disc)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
65559	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
65559	acid phosphatase	+	3.1.3.2
65559	alkaline phosphatase	+	3.1.3.1
65559	alpha-chymotrypsin	-	3.4.21.1
65559	alpha-fucosidase	-	3.2.1.51
65559	alpha-galactosidase	-	3.2.1.22
65559	alpha-glucosidase	-	3.2.1.20
65559	alpha-mannosidase	-	3.2.1.24
65559	arginine dihydrolase	-	3.5.3.6
65559	beta-galactosidase	+	3.2.1.23
65559	beta-glucuronidase	-	3.2.1.31
65559	catalase	-	1.11.1.6
65559	cystine arylamidase	+	3.4.11.3
65559	cytochrome oxidase	+	1.9.3.1
65559	esterase (C 4)	+
65559	esterase Lipase (C 8)	-
65559	leucine arylamidase	+	3.4.11.1
65559	lipase (C 14)	-
65559	N-acetyl-beta-glucosaminidase	-	3.2.1.52
65559	naphthol-AS-BI-phosphohydrolase	+
65559	trypsin	+	3.4.21.4
65559	urease	-	3.5.1.5
65559	valine arylamidase	-

Fatty acid profile

Metadata FA analysis

@ref

65559

Fatty acid	Percentage
C15:0 anteiso	31.3
C16:1ω6c / C16:1ω7c	19.7
C15:0 iso	13.3
C15:1 iso G	9.5
C16:0	4.1
C15:0 3OH	3.9
C14:0	2.8
C14:0 iso	2
C13:1	2
C16:0 3OH	1.9
C15:1 anteiso A	1.7
C12:0 iso	1.1
C15:0 2OH	1
C13:0 anteiso	1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Freshwater
#Environmental	#Aquatic	#Lake (large)

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Enrichment culture	Enrichment culture duration	Enrichment culture temperature
65559	oligotrophic freshwater lake	2016-05-12	Lake Soyang	Republic of Korea	KOR	Asia	37.9475	127.819 37.9475/127.819	R2A	7 days	20
67771	From freshwater lake		Lake Soyang	Republic of Korea	KOR	Asia	37.9475	127.819 37.9475/127.819

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Database
65559	Flavobacterium lacicola strain IMCC25901 16S ribosomal RNA gene, partial sequence	KX505863

GC content

@ref	GC-content (mol%)	Method
65559	34.2	thermal denaturation, midpoint method (Tm)
67771	34.2

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Flavobacterium lacicola sp. nov., isolated from a freshwater lake.	Park M, Song J, Nam GG, Kim S, Joung Y, Cho JC	Int J Syst Evol Microbiol	10.1099/ijsem.0.002712	2018

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#65559	Miri Park, Jaeho Song, Gi Gyun Nam, Suhyun Kim, Yochan Joung and Jang-Cheon Cho: Flavobacterium lacicola sp. nov., isolated from a freshwater lake. IJSEM 68: 1565 - 1570 2018 ( DOI 10.1099/ijsem.0.002712 , PubMed 29537359 )
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Flavobacterium lacicola (KCTC 52571, NBRC 112883, IMCC 25901)

Name and taxonomic classification