Name: Salinisphaera aquimarina MCCC 1K03246
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 158649

Type strain:

Species: Salinisphaera aquimarina

Culture col. no.: MCCC 1K03246, KCTC 52640, CCMM 005, JCM 31813

Strain history: <- Lili Tang, Qingdao Institute of Bioenergy and Bioprocess

NCBI tax ID(s): 2094031 (species)

Special Collections

Section

When using BacDive for research please cite our paper

Salinisphaera aquimarina MCCC 1K03246 is an aerobe, Gram-negative, motile bacterium that forms circular colonies and was isolated from offshore seawater.

colony-forming
Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Nevskiales*
	Family	*Salinisphaeraceae*
	Genus	*Salinisphaera*
	Species	**Salinisphaera aquimarina**
	Full Scientific Name (LPSN)	Salinisphaera aquimarina Tang et al. 2018

Information on morphological and physiological properties Morphology

[Ref.: #65374]	Gram stain	negative

[Ref.: #65374]	Cell length	1.2-1.6 µm

[Ref.: #65374]	Cell width	0.6-0.7 µm

[Ref.: #65374]	Cell shape	rod-shaped

[Ref.: #65374]	Motility	yes

[Ref.: #65374]	Flagellum arrangement	subpolar

[Ref.: #65374]	Colony size	1 mm
[Ref.: #65374]	Colony color	white
[Ref.: #65374]	Colony shape	circular
[Ref.: #65374]	Incubation period	6 days
[Ref.: #65374]	Cultivation medium used	marine agar 2216

Information on culture and growth conditions Culture and growth conditions

[Ref.: #65374]

Culture medium

Marine agar (MA)

[Ref.: #65374]

Culture medium growth

[Ref.: #65374]

Culture medium

MacConkey agar

[Ref.: #65374]

Culture medium growth

		Temperature
[Ref.: #65374]	growth	0-37 °C
[Ref.: #65374]	optimum	30 °C
[Ref.: #67770]	growth	30 °C
[Ref.: #67771]	growth	28 °C

	pH	Kind of pH		pH
[Ref.: #65374]			optimum	7
[Ref.: #65374]			growth	5-9

Information on physiology and metabolism Physiology and metabolism

[Ref.: #65374]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

	Salt	Tested relation		Salt conc.
[Ref.: #65374]	NaCl		growth	1-18	%(w/v)
[Ref.: #65374]	NaCl		optimum	4	%
[Ref.: #65374]	NaCl	no	growth	0	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #65374]	casein	-	hydrolysis
[Ref.: #65374]	D-fructose ChEBI	+	carbon source
[Ref.: #65374]	D-fructose ChEBI	+	energy source
[Ref.: #65374]	D-glucose ChEBI	+	carbon source
[Ref.: #65374]	D-glucose ChEBI	+	energy source
[Ref.: #65374]	D-mannose ChEBI	+	carbon source
[Ref.: #65374]	D-mannose ChEBI	+	energy source
[Ref.: #65374]	dna ChEBI	-	hydrolysis
[Ref.: #65374]	gelatin ChEBI	-	hydrolysis
[Ref.: #65374]	glucose ChEBI	-	fermentation
[Ref.: #65374]	glucose ChEBI	+	builds acid from
[Ref.: #65374]	L-ornithine ChEBI	+	carbon source
[Ref.: #65374]	L-ornithine ChEBI	+	energy source
[Ref.: #65374]	L-rhamnose ChEBI	+	carbon source
[Ref.: #65374]	L-rhamnose ChEBI	+	energy source
[Ref.: #65374]	lactose ChEBI	+	builds acid from
[Ref.: #65374]	mannitol ChEBI	+	builds acid from
[Ref.: #65374]	nitrate ChEBI	+	reduction
[Ref.: #65374]	nitrite ChEBI	-	reduction
[Ref.: #65374]	sodium citrate ChEBI	+	carbon source
[Ref.: #65374]	sodium citrate ChEBI	+	energy source
[Ref.: #65374]	starch ChEBI	-	hydrolysis
[Ref.: #65374]	tween 20 ChEBI	+	hydrolysis
[Ref.: #65374]	tween 40 ChEBI	+	hydrolysis
[Ref.: #65374]	tween 80 ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #65374]	acetoin ChEBI	no
[Ref.: #65374]	hydrogen sulfide ChEBI	no
[Ref.: #65374]	indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #65374]		acetoin ChEBI	-
[Ref.: #65374]		glucose ChEBI		-

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #65374]		catalase	+	1.11.1.6
[Ref.: #65374]		cytochrome oxidase	+	1.9.3.1

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #65374]

Fatty acid	Percentage
C18:0	27.9
C19:0 cyclo ω8c	25.7
C18:1ω7c	24.3
C16:0	8.6
C14:0	4.9
C14:0 2OH	2.9
C16:1ω5c	2.7
C12:0 3OH	1.3
C18:1ω9c	1.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #65374]	Sample type/isolated from	offshore seawater
[Ref.: #65374]	Sampling date	2014-09
[Ref.: #65374]	Geographic location (country and/or sea, region)	Qingdao
[Ref.: #65374]	Country	China
[Ref.: #65374]	Country ISO 3 Code	CHN
[Ref.: #65374]	Continent	Asia
[Ref.: #65374]	Geographic location	36.1666°/120.3500°
[Ref.: #65374]	Enrichment culture	marine agar 2216
[Ref.: #65374]	Enrichment culture duration	7 days
[Ref.: #65374]	Enrichment culture temperature	28 ̊C

[Ref.: #67770]	Sample type/isolated from	Offshore seawater at Qingdao
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From seawater
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KY060012 (>99% sequence identity) for Salinisphaera aquimarina subclade from Microbeatlas

Aquatic Samples	116
Soil Samples	18
Animal Samples	48
Plant Samples	4
Total Samples	186

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #65374]	Salinisphaera aquimarina strain CCMM005 16S ribosomal RNA gene, partial sequence	KY060012		GenBank ENA

[Ref.: #65374]

GC-content

65.3 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #65374]

Culture collection no.

MCCC 1K03246, KCTC 52640, CCMM 005, JCM 31813

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Salinisphaera aquimarina sp. nov., isolated from seawater.	Tang L, Zhang Z, Xie R, Jiao N, Zhang Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.002638	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65374

Lili Tang, Zenghu Zhang, Ruize Xie, Nianzhi Jiao, Yongyu Zhang: Salinisphaera aquimarina sp. nov., isolated from seawater. IJSEM 68: 1130 - 1134 2018 ( DOI 10.1099/ijsem.0.002638 , PubMed 29458504 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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