Acinetobacter piscicola LW15 is a facultative anaerobe, Gram-negative, rod-shaped prokaryote that forms circular colonies and was isolated from external lesions of diseased farmed Murray cod.
Gram-negative rod-shaped colony-forming facultative anaerobe genome sequence 16S sequence| @ref 20215 |
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| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pseudomonadales |
| Family Moraxellaceae |
| Genus Acinetobacter |
| Species Acinetobacter piscicola |
| Full scientific name Acinetobacter piscicola Liu et al. 2018 |
| @ref | Type of hemolysis | Colony size | Colony color | Colony shape | Incubation period | Medium used | |
|---|---|---|---|---|---|---|---|
| 65363 | gamma | 1-3 mm | milky-yellow | circular | 2 days | Luria-Bertani agar |
| @ref | Name | Growth | |
|---|---|---|---|
| 65363 | LB (Luria-Bertani) MEDIUM |
| 65363 | Observationwith fimbria- or pilus-like structures all over their surface |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 65363 | 62064 ChEBI | 2,3-butanediol | - | growth | |
| 65363 | 17879 ChEBI | 4-hydroxybenzoate | - | growth | |
| 65363 | 39150 ChEBI | 4-oxopentanoate | - | growth | |
| 65363 | 30089 ChEBI | acetate | + | carbon source | |
| 65363 | 17128 ChEBI | adipate | - | growth | |
| 65363 | 78208 ChEBI | azelaate | + | carbon source | |
| 65363 | 16150 ChEBI | benzoate | - | growth | |
| 65363 | 16958 ChEBI | beta-alanine | + | carbon source | |
| 65363 | casein | - | hydrolysis | ||
| 65363 | 30719 ChEBI | citraconate | - | growth | |
| 65363 | 18391 ChEBI | D-gluconate | - | growth | |
| 65363 | 17634 ChEBI | D-glucose | - | builds acid from | |
| 65363 | 17634 ChEBI | D-glucose | - | growth | |
| 65363 | 15588 ChEBI | D-malate | + | carbon source | |
| 65363 | 16988 ChEBI | D-ribose | - | growth | |
| 65363 | 4853 ChEBI | esculin | - | hydrolysis | |
| 65363 | 16236 ChEBI | ethanol | - | growth | |
| 65363 | 16865 ChEBI | gamma-aminobutyric acid | - | growth | |
| 65363 | 5291 ChEBI | gelatin | - | hydrolysis | |
| 65363 | 58044 ChEBI | gentisate | - | growth | |
| 65363 | 17859 ChEBI | glutaric acid | + | carbon source | |
| 65363 | 18295 ChEBI | histamine | - | growth | |
| 65363 | 30849 ChEBI | L-arabinose | - | growth | |
| 65363 | 16467 ChEBI | L-arginine | + | carbon source | |
| 65363 | 29991 ChEBI | L-aspartate | - | growth | |
| 65363 | 15971 ChEBI | L-histidine | - | growth | |
| 65363 | 15603 ChEBI | L-leucine | - | growth | |
| 65363 | 15729 ChEBI | L-ornithine | - | growth | |
| 65363 | 17295 ChEBI | L-phenylalanine | - | growth | |
| 65363 | 30924 ChEBI | L-tartrate | - | growth | |
| 65363 | 24996 ChEBI | lactate | + | carbon source | |
| 65363 | 15792 ChEBI | malonate | - | growth | |
| 65363 | 18401 ChEBI | phenylacetate | - | growth | |
| 65363 | 17148 ChEBI | putrescine | - | growth | |
| 65363 | 64243 ChEBI | sodium L-glutamate | + | carbon source | |
| 65363 | 28017 ChEBI | starch | - | hydrolysis | |
| 65363 | 15708 ChEBI | trans-aconitate | - | growth | |
| 65363 | 62517 ChEBI | tricarballylate | - | growth | |
| 65363 | 18123 ChEBI | trigonelline | - | growth | |
| 65363 | 16765 ChEBI | tryptamine | - | growth |
| @ref | Sample type | Sampling date | Geographic location | Country | Country ISO 3 Code | Continent | Latitude | Longitude | Enrichment culture | Enrichment culture composition | Enrichment culture duration | Enrichment culture temperature | Isolation procedure | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65363 | external lesions of diseased farmed Murray cod | 2017-04 | Dajing town, Yueqing City, Zhejiang province | China | CHN | Asia | 28.41 | 121.14 28.41/121.14 | Columbia agar | 5% sheep blood | 3 days | 30 | The external muscle ulcerative lesions on the fishtail of Murray cod were separated, mashed and suspended in sterilized water, then serially diluted and spread onto Columbia agar with 5 % sheep blood and aerobic incubation was performed at 30°C for 3 days | |
| 67770 | External lesions of diseased farmed Murray cod in Dajing Town | Yueqing City, Zhejiang Province | China | CHN | Asia | |||||||||
| 67771 | From external lesions of diseased farmed Murray cod(Maccullochella peelii), Intensively cultureed pond of Murray cod(E121.4 | China | CHN | Asia |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | ASM223375v1 assembly for Acinetobacter piscicola LW15 | scaffold | 2006115 | 64.16 |
| @ref | Description | Accession | Database | |
|---|---|---|---|---|
| 65363 | Acinetobacter piscicola strain LW15 16S ribosomal RNA gene, partial sequence | MF062566 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 65363 | 37.2 | genome sequence analysis |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Acinetobacter piscicola sp. nov., isolated from diseased farmed Murray cod (Maccullochella peelii peelii). | Liu Y, Rao Q, Tu J, Zhang J, Huang M, Hu B, Lin Q, Luo T | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002608 | 2018 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #65363 | Yang Liu, Qiuhua Rao, Jiefeng Tu, Jiaonan Zhang, Minmin Huang, Bing Hu, Qiu Lin, Tuyan Luo: Acinetobacter piscicola sp. nov., isolated from diseased farmed Murray cod (Maccullochella peelii peelii). IJSEM 68: 905 - 910 2018 ( DOI 10.1099/ijsem.0.002608 , PubMed 29458492 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #67771 | Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC; |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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