Colwellia beringensis (MCCC 1A11668, KCTC 52554, NB097-1)

Name: Colwellia beringensis (MCCC 1A11668, KCTC 52554, NB097-1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 158534

Type strain

Strain Designation NB097-1

Culture col. no. MCCC 1A11668 KCTC 52554 NB097-1

NCBI tax ID(s) 1967665

Special Collections KCTC Literature strains

Links

Colwellia beringensis NB097-1 is an aerobe, Gram-negative, motile prokaryote that forms circular colonies and was isolated from marine sediment sample.

Gram-negative motile rod-shaped colony-forming aerobe genome sequence 16S sequence

Name and taxonomic classification

SI-ID 27495

KCTC 52554

@ref 20215

Last LPSN update 2025-12-16 10:08:03

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Alteromonadales

Family Colwelliaceae

Genus Colwellia

Species Colwellia beringensis

Full scientific name Colwellia beringensis Zhang et al. 2017

Synonyms (1)

Cognaticolwellia beringensis

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility	Flagellum arrangement
65220	negative	0.6-3.0 µm	0.3-0.6 µm	rod-shaped		polar

Colony morphology

@ref	Colony color	Colony shape	Medium used
65220	white	circular	marine agar 2216

Culture and growth conditions

Culture medium

@ref	Name	Growth
65220	Marine agar (MA)

Culture temp

@ref	Growth	Type	Temperature (°C)
65220	positive	growth	0-25
65220	positive	optimum	10-13
65220	negative	growth	28
67771	positive	growth	13

Culture pH

@ref	Ability	Type	PH
65220	positive	optimum	7.5-10
65220	positive	growth	6-10.5

Physiology and metabolism

Oxygen tolerance

67771

Oxygen toleranceaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
65220	NaCl	positive	growth	1-6 %(w/v)
65220	NaCl	positive	optimum	2-3 %(w/v)
65220	NaCl		growth	0 %(w/v)

Metabolite utilization

@ref	Metabolite	Utilization activity	Kind of utilization tested
65220	casein	+	hydrolysis
65220	cellobiose	-	builds acid from
65220	cellobiose	-	carbon source
65220	citrate	-	carbon source
65220	D-fructose	-	carbon source
65220	D-galactose	+	carbon source
65220	D-xylose	-	carbon source
65220	esculin	+	hydrolysis
65220	fructose	-	builds acid from
65220	gelatin	+	hydrolysis
65220	glucose	+	carbon source
65220	L-arabinose	+	builds acid from
65220	L-arabinose	+	carbon source
65220	L-malate	-	carbon source
65220	maltose	+	carbon source
65220	mannitol	-	builds acid from
65220	mannitol	+	carbon source
65220	mannose	+	carbon source
65220	melibiose	+	builds acid from
65220	nitrate	+	reduction
65220	starch	+	hydrolysis
65220	sucrose	+	builds acid from
65220	trehalose	-	carbon source
65220	tween 20	+	hydrolysis
65220	tween 40	+	hydrolysis
65220	tween 60	+	hydrolysis
65220	tween 80	+	hydrolysis
65220	urea	+	hydrolysis

Antibiotic resistance

@ref	ChEBI	Metabolite	Sensitivity conc.
65220	28971	ampicillin	10 µg (disc)
65220	3393	carbenicillin	100 µg (disc)
65220	124991	cefalotin	30 µg (disc)
65220	17698	chloramphenicol	50 µg (disc)
65220	17833	gentamicin	30 µg (disc)
65220	6472	lincomycin
65220	28368	novobiocin	5 µg (disc)
65220	16869	oleandomycin	15 µg (disc)
65220	17334	penicillin
65220	8309	polymyxin b	300 Unit (disc)
65220	17076	streptomycin	25 µg (disc)
65220	27902	tetracycline	30 µg (disc)

Metabolite production

@ref	Chebi-ID	Metabolite
65220	15688 ChEBI	acetoin
65220	16136 ChEBI	hydrogen sulfide
65220	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
65220	15688 ChEBI	acetoin	-

Enzymes

@ref	Value	Activity	Ec
65220	acid phosphatase	+	3.1.3.2
65220	alkaline phosphatase	+	3.1.3.1
65220	alpha-chymotrypsin	-	3.4.21.1
65220	alpha-fucosidase	-	3.2.1.51
65220	alpha-galactosidase	-	3.2.1.22
65220	alpha-glucosidase	-	3.2.1.20
65220	alpha-mannosidase	-	3.2.1.24
65220	beta-galactosidase	-	3.2.1.23
65220	beta-glucosidase	-	3.2.1.21
65220	beta-glucuronidase	-	3.2.1.31
65220	catalase	+	1.11.1.6
65220	cystine arylamidase	-	3.4.11.3
65220	cytochrome oxidase	+	1.9.3.1
65220	esterase (C 4)	+
65220	esterase Lipase (C 8)	+
65220	leucine arylamidase	+	3.4.11.1
65220	lipase (C 14)	-
65220	N-acetyl-beta-glucosaminidase	-	3.2.1.52
65220	naphthol-AS-BI-phosphohydrolase	-
65220	trypsin	-	3.4.21.4
65220	valine arylamidase	-

Fatty acid profile

Metadata FA analysis

@ref

65220

Fatty acid	Percentage
C16:1ω7c and/or C16:1ω6c	40.7
C16:0	16
C15:1ω8c	6.2
C16:1ω9c	4.5
C17:0	4.3
C18:0	3.1
C11:0 3OH	2.9
C11:0 iso	2.1
C8:0 3-OH	1.9
C10:0	1.8
C14:0	1.3
C10:0 3OH	1.2
C12:0 3OH	1.1
C9:0	1.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Latitude	Longitude	Enrichment culture	Enrichment culture duration	Enrichment culture temperature	Isolation procedure
65220	marine sediment sample	Bering sea	Pacific Ocean	62.5966	-167.6 62.5966/-167.6	marine agar 2216	4 days	5	isolated by the standard dilution-platng technique on marine agar 2216
67771	Marine sediment	From Bering Sea	China	62.5967	-167.6 62.5967/-167.6

Taxonmaps

69479

Global distribution of 16S sequence MG016490 (>99% sequence identity) for Colwellia beringensis from Microbeatlas

Aquatic Samples	1603
Soil Samples	12
Animal Samples	147
Plant Samples	5
Total Samples	1767

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM207689v1 assembly for Cognaticolwellia beringensis NB097-1	complete	GCA_002076895	1967665.3	2751185795	1967665	94.07

Genome browser: GCA_002076895

16S sequences

@ref	Description	Accession	Database
65220	Cognaticolwellia beringensis strain NB097-1 16S ribosomal RNA gene, partial sequence	MG016490

GC content

@ref	GC-content (mol%)	Method
65220	38.5	sequence analysis

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Colwellia beringensis sp. nov., a psychrophilic bacterium isolated from the Bering Sea.	Zhang C, Guo W, Wang Y, Chen X	Int J Syst Evol Microbiol	10.1099/ijsem.0.002423	2017

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#65220	Cong Zhang, Wenbin Guo, Yuguang Wang, Xinhua Chen: Colwellia beringensis sp. nov., a psychrophilic bacterium isolated from the Bering Sea. IJSEM 67: 5102 - 5107 2017 ( DOI 10.1099/ijsem.0.002423 , PubMed 29068274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Colwellia beringensis (MCCC 1A11668, KCTC 52554, NB097-1)

Name and taxonomic classification