Name: Rhodovulum aestuarii JA924
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 158529

Type strain:

Species: Rhodovulum aestuarii

Strain Designation: JA924

Culture col. no.: LMG 29031, KCTC 15485

Strain history: <- Ch Sasikala, India

NCBI tax ID(s): 1671555 (species)

SI-ID 396447

LMG 29031, KCTC 15485

Section

Rhodovulum aestuarii JA924 is an anaerobe, photoheterotroph, mesophilic bacterium that builds chains and aggregates and was isolated from brackish water.

Gram-negative
rod-shaped
anaerobe
mesophilic
photoheterotroph
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Roseobacteraceae*
	Genus	*Rhodovulum*
	Species	**Rhodovulum aestuarii**
	Full Scientific Name (LPSN)	Rhodovulum aestuarii Divyasree et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #65206]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative

[Ref.: #65206]	Cell length	2-3 µm

[Ref.: #65206]	Cell shape	rod-shaped
[Ref.: #65206]	Cell shape	oval-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #65206]	Motility	no
[Ref.: #67771]	Motility	no

[Ref.: #65206]

Colony color

yellowish brown

[Ref.: #65206]	Pigment production	yes
[Ref.: #65206]	Pigment name	Bacteriochlorophyll-a
[Ref.: #65206]	Pigment production	yes
[Ref.: #65206]	Pigment name	spheroidene

[Ref.: #65206]	Multicellular complex forming ability	yes
[Ref.: #65206]	Multicellular complex name	chains and aggregates

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #65206]	growth	25-35 °C
[Ref.: #65206]	optimum	30 °C
[Ref.: #67771]	growth	30 °C

[Ref.: #65206]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #65206]			optimum	7.5
[Ref.: #65206]			growth	6-10

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67771]

Oxygen tolerance

anaerobe

[Ref.: #65206]	Nutrition type	photoheterotroph
[Ref.: #65206]	Nutrition type	photolithoautotroph
[Ref.: #65206]	Nutrition type	chemoorganoheterotroph

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #65206]		NaCl		growth	0-8	%(w/v)
[Ref.: #65206]		NaCl		optimum	2-4	%(w/v)

[Ref.: #65206]	Observation	Bacteriochlorophyll-a and spheroidene are the photosynthetic pigments.
[Ref.: #65206]	Observation	Chemolithoautotrophy and fermentative growth are absent.
[Ref.: #67771]	Observation	quinones: Q-10

[Ref.: #65206]	Name of tolerated compound	sulfide
[Ref.: #65206]	Tolerated concentration	4

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #65206]	2-oxoglutarate ChEBI	-	carbon source
[Ref.: #65206]	2-oxoglutarate ChEBI	-	electron donor
[Ref.: #65206]	acetate ChEBI	+	carbon source
[Ref.: #65206]	acetate ChEBI	+	electron donor
[Ref.: #65206]	ammonium chloride ChEBI	+	nitrogen source
[Ref.: #65206]	ascorbate ChEBI	-	carbon source
[Ref.: #65206]	ascorbate ChEBI	-	electron donor
[Ref.: #65206]	aspartate ChEBI	-	carbon source
[Ref.: #65206]	aspartate ChEBI	-	electron donor
[Ref.: #65206]	aspartate ChEBI	+	nitrogen source
[Ref.: #65206]	benzoate ChEBI	-	carbon source
[Ref.: #65206]	benzoate ChEBI	-	electron donor
[Ref.: #65206]	butanol ChEBI	-	carbon source
[Ref.: #65206]	butanol ChEBI	-	electron donor
[Ref.: #65206]	butyrate ChEBI	-	carbon source
[Ref.: #65206]	butyrate ChEBI	-	electron donor
[Ref.: #65206]	casamino acids	+	carbon source
[Ref.: #65206]	casamino acids	+	electron donor
[Ref.: #65206]	citrate ChEBI	-	carbon source
[Ref.: #65206]	citrate ChEBI	-	electron donor
[Ref.: #65206]	crotonate ChEBI	-	carbon source
[Ref.: #65206]	crotonate ChEBI	-	electron donor
[Ref.: #65206]	decanoate ChEBI	-	carbon source
[Ref.: #65206]	decanoate ChEBI	-	electron donor
[Ref.: #65206]	dinitrogen ChEBI	+	nitrogen source
[Ref.: #65206]	ethanol ChEBI	-	carbon source
[Ref.: #65206]	ethanol ChEBI	-	electron donor
[Ref.: #65206]	formate ChEBI	+	carbon source
[Ref.: #65206]	formate ChEBI	+	electron donor
[Ref.: #65206]	fructose ChEBI	+	carbon source
[Ref.: #65206]	fructose ChEBI	+	electron donor
[Ref.: #65206]	fumarate ChEBI	-	carbon source
[Ref.: #65206]	fumarate ChEBI	-	electron donor
[Ref.: #65206]	gluconate ChEBI	+	carbon source
[Ref.: #65206]	gluconate ChEBI	+	electron donor
[Ref.: #65206]	glucose ChEBI	+/-	carbon source
[Ref.: #65206]	glucose ChEBI	+/-	electron donor
[Ref.: #65206]	glutamine ChEBI	+	nitrogen source
[Ref.: #65206]	glycerol ChEBI	-	carbon source
[Ref.: #65206]	glycerol ChEBI	-	electron donor
[Ref.: #65206]	glycolate ChEBI	-	carbon source
[Ref.: #65206]	glycolate ChEBI	-	electron donor
[Ref.: #65206]	L-glutamate ChEBI	-	carbon source
[Ref.: #65206]	L-glutamate ChEBI	-	electron donor
[Ref.: #65206]	lactate ChEBI	-	carbon source
[Ref.: #65206]	lactate ChEBI	-	electron donor
[Ref.: #65206]	malate ChEBI	-	carbon source
[Ref.: #65206]	malate ChEBI	-	electron donor
[Ref.: #65206]	maltose ChEBI	-	carbon source
[Ref.: #65206]	maltose ChEBI	-	electron donor
[Ref.: #65206]	mannitol ChEBI	-	carbon source
[Ref.: #65206]	mannitol ChEBI	-	electron donor
[Ref.: #65206]	methanol ChEBI	-	carbon source
[Ref.: #65206]	methanol ChEBI	-	electron donor
[Ref.: #65206]	methionine ChEBI	+	carbon source
[Ref.: #65206]	methionine ChEBI	+	electron donor
[Ref.: #65206]	nitrate ChEBI	+	nitrogen source
[Ref.: #65206]	peptone	+	carbon source
[Ref.: #65206]	peptone	+	electron donor
[Ref.: #65206]	propanol ChEBI	-	carbon source
[Ref.: #65206]	propanol ChEBI	-	electron donor
[Ref.: #65206]	propionate ChEBI	-	carbon source
[Ref.: #65206]	propionate ChEBI	-	electron donor
[Ref.: #65206]	pyruvate ChEBI	+	carbon source
[Ref.: #65206]	pyruvate ChEBI	+	electron donor
[Ref.: #65206]	sorbitol ChEBI	+	carbon source
[Ref.: #65206]	sorbitol ChEBI	+	electron donor
[Ref.: #65206]	succinate ChEBI	+	carbon source
[Ref.: #65206]	succinate ChEBI	+	electron donor
[Ref.: #65206]	sucrose ChEBI	+	carbon source
[Ref.: #65206]	sucrose ChEBI	+	electron donor
[Ref.: #65206]	sulfate ChEBI	+	assimilation
[Ref.: #65206]	sulfide ChEBI	+	assimilation
[Ref.: #65206]	sulfide ChEBI	+	carbon source
[Ref.: #65206]	sulfide ChEBI	+	electron donor
[Ref.: #65206]	tartrate ChEBI	-	carbon source
[Ref.: #65206]	tartrate ChEBI	-	electron donor
[Ref.: #65206]	thioglycolate ChEBI	-	carbon source
[Ref.: #65206]	thioglycolate ChEBI	-	electron donor
[Ref.: #65206]	thiosulfate ChEBI	+	assimilation
[Ref.: #65206]	valerate ChEBI	-	carbon source
[Ref.: #65206]	valerate ChEBI	-	electron donor
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #65206]	Sample type/isolated from	brackish water
[Ref.: #65206]	Geographic location (country and/or sea, region)	near Somnath on the western coast of Gujarat
[Ref.: #65206]	Country	India
[Ref.: #65206]	Country ISO 3 Code	IND
[Ref.: #65206]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From brackish water
[Ref.: #67771]	Geographic location (country and/or sea, region)	near Somnath temple, western coast of Gujarat
[Ref.: #67771]	Country	India
[Ref.: #67771]	Country ISO 3 Code	IND
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Brackish

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LN866627 (>99% sequence identity) for Rhodovulum aestuarii from Microbeatlas

Aquatic Samples	228
Soil Samples	16
Animal Samples	28
Plant Samples	1
Total Samples	273

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #65206]	16S rRNA gene sequence	LN866627		GenBank

[Ref.: #65206]	GC-content	63.92-64.08 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67771]	GC-content	63.92-64.08 mol%

Availability in culture collections External links

[Ref.: #65206]

Culture collection no.

LMG 29031, KCTC 15485

[Ref.: #111318]

SI-ID 396447

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Rhodovulum aestuarii sp. nov., isolated from a brackish water body.	Divyasree B, Lakshmi KVNS, Bharti D, Sasikala C, Ramana CV	Int J Syst Evol Microbiol	10.1099/ijsem.0.000691	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65206

B. Divyasree, K. V. N. S. Lakshmi, Dave Bharti, Ch. Sasikala, Ch. V. Ramana: Rhodovulum aestuarii sp. nov., isolated from a brackish water body. IJSEM 66: 165 - 171 2016 ( DOI 10.1099/ijsem.0.000691 , PubMed 26475698 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#111318

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID396447.1 )

* These data were automatically processed and therefore are not curated

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