Name: Klebsiella quasipneumoniae subsp. similipneumoniae IF3SW-P1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 158169

Type strain:

Species: Klebsiella quasipneumoniae subsp. similipneumoniae

Strain Designation: IF3SW-P1

Culture col. no.: DSM 104457

Strain history: <- K. Venkateswaran, Jet Propulsion Laboratory (NASA), Pasadena, USA; IF3SW-P1

NCBI tax ID(s): 1463164 (subspecies)

SI-ID 406316

DSM 104457

Other strains from Klebsiella quasipneumoniae subsp. similipneumoniae

K. quasipneumoniae subsp. similipneumoniae 07A044, CRBIP28.112, SB30, CCUG ... (type strain)
K. quasipneumoniae subsp. similipneumoniae CW-D 3, DSM 100662, CCTCC AB 206144, ...

Section

Klebsiella quasipneumoniae subsp. similipneumoniae IF3SW-P1 is a mesophilic human pathogen that was isolated from Internation Space Station, Environmental Surface.

human pathogen
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Enterobacterales*
	Family	*Enterobacteriaceae*
	Genus	*Klebsiella*
	Species	**Klebsiella quasipneumoniae subsp. similipneumoniae**
	Full Scientific Name (LPSN)	Klebsiella quasipneumoniae subsp. similipneumoniae Brisse et al. 2014

Synonym

Klebsiella alba

Information on culture and growth conditions Culture and growth conditions

[Ref.: #64762]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #64762]

Culture medium growth

[Ref.: #64762]

Culture medium link

Medium recipe at MediaDive

[Ref.: #64762]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #64762]			growth	28 °C

[Ref.: #64762]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #64762]	Sample type/isolated from	Internation Space Station, Environmental Surface
[Ref.: #64762]	Country	USA
[Ref.: #64762]	Country ISO 3 Code	USA
[Ref.: #64762]	Continent	North America
* marker position based on {}

Isolation sources categories

#Engineered	#Built environment	-
#Environmental	-	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #64762]	Pathogenicity (human)	yes
[Ref.: #64762]	Pathogenicity (animal)	yes
[Ref.: #64762]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Klebsiella quasipneumoniae IF3SW-P1	GCA_001743455	contig	GenBank	1463165 tax ID	*
[Ref.: #66792]	Klebsiella quasipneumoniae subsp. similipneumoniae IF3SW-P1	GCA_022313415	complete	GenBank	1463164 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Klebsiella quasipneumoniae subsp. similipneumoniae IF3SW-P1 NCBI: GCA_022313415.1
[Ref.: #69480]	flagellated	no	93.409	no
[Ref.: #69480]	gram-positive	no	97.358	no
[Ref.: #69480]	anaerobic	no	95.965	no
[Ref.: #69480]	aerobic	yes	89.477	no
[Ref.: #69480]	halophile	no	90.017	no
[Ref.: #69480]	spore-forming	no	93.225	no
[Ref.: #69480]	motile	no	83.894	no
[Ref.: #69480]	glucose-ferment	yes	91.208	no
[Ref.: #69480]	thermophile	no	99.573	yes
[Ref.: #69480]	glucose-util	yes	94.391	no
[Ref.: #69480]	flagellated	no	93.409	no
[Ref.: #69480]	gram-positive	no	97.358	no
[Ref.: #69480]	anaerobic	no	95.965	no
[Ref.: #69480]	aerobic	yes	89.477	no
[Ref.: #69480]	halophile	no	90.017	no
[Ref.: #69480]	spore-forming	no	93.225	no
[Ref.: #69480]	motile	no	83.894	no
[Ref.: #69480]	glucose-ferment	yes	91.208	no
[Ref.: #69480]	thermophile	no	99.573	yes
[Ref.: #69480]	glucose-util	yes	94.391	no

Availability in culture collections External links

[Ref.: #64762]

Culture collection no.

DSM 104457

[Ref.: #111000]

SI-ID 406316

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Complete Genome Sequence of Klebsiella quasipneumoniae subsp. similipneumoniae Strain IF3SW-P1, Isolated from the International Space Station.	Sushenko NS, Singh NK, Vellone DL, Tighe SW, Hedlund BP, Venkateswaran K, Moser DP	Microbiol Resour Announc	10.1128/mra.00476-22	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#64762

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 104457

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#111000

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406316.1 )

* These data were automatically processed and therefore are not curated

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