Name: Bacteroides intestinalis APC919/174
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 158057

Type strain:

Species: Bacteroides intestinalis

Strain Designation: APC919/174

Culture col. no.: DSM 108646

Strain history: <- B. Fitzgerald, APC Microbiome University College Cork; APC919/174

NCBI tax ID(s): 329854 (species)

SI-ID 405344

DSM 108646

Special Collections

DSMZ

Bacteroides phage vB_BinP-crASS001

Other strains from Bacteroides intestinalis

Section

Bacteroides intestinalis APC919/174 is an anaerobe human pathogen that was isolated from Human faeces.

anaerobe
human pathogen
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Bacteroidia*
	Order	*Bacteroidales*
	Family	*Bacteroidaceae*
	Genus	*Bacteroides*
	Species	**Bacteroides intestinalis**
	Full Scientific Name (LPSN)	Bacteroides intestinalis Bakir et al. 2006

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %91.935

Information on culture and growth conditions Culture and growth conditions

[Ref.: #64631]

Culture medium

PYG MEDIUM (MODIFIED) (DSMZ Medium 104)

[Ref.: #64631]

Culture medium growth

[Ref.: #64631]

Culture medium link

Medium recipe at MediaDive

[Ref.: #64631]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #64631]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

anaerobe Confidence in %92.301

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #64631]	Sample type/isolated from	Human faeces
[Ref.: #64631]	Geographic location (country and/or sea, region)	APC institute, University college Cork, Cork.
[Ref.: #64631]	Country	Ireland
[Ref.: #64631]	Country ISO 3 Code	IRL
[Ref.: #64631]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Human	-
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #64631]	Pathogenicity (human)	yes, in single cases
[Ref.: #64631]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bacteroides intestinalis APC919/174	GCA_003363675	complete	GenBank ENA	329854 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bacteroides intestinalis APC919/174 NCBI: GCA_003363675.2
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	91.935	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	92.301	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	92.686	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	88.029	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	93.311	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	88.5	no

Availability in culture collections External links

[Ref.: #64631]

Culture collection no.

DSM 108646

[Ref.: #110901]

SI-ID 405344


[Ref.: #124042]	Bacteroides phage vB_BinP-crASS001

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#64631

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 108646

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#110901

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405344.1 )

#124042

Dr. Johannes Wittmann, Dr. Clara Rolland, Dr. Lorenz Reimer, Joaquim Sardà: PhageDive .

* These data were automatically processed and therefore are not curated

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