Alteribacillus persepolensis (DSM 21632, CCM 7595, JCM 15720)

Name: Alteribacillus persepolensis (DSM 21632, CCM 7595, JCM 15720)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1572

Type strain

Strain Designation HS136

Culture col. no. DSM 21632 CCM 7595 JCM 15720 LMG 25222 HS136

NCBI tax ID(s) 568899

Special Collections DSMZ JCM Literature strains

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Alteribacillus persepolensis HS136 is an aerobe, spore-forming, Gram-positive prokaryote that was isolated from brine.

spore-forming Gram-positive motile rod-shaped aerobe genome sequence 16S sequence

Name and taxonomic classification

SI-ID 359343

LMG 24785,LMG 25222,CCM 7595,DSM 21632,JCM 15720

@ref 20215

Last LPSN update 2025-12-16 09:47:08

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Alteribacillus

Species Alteribacillus persepolensis

Full scientific name Alteribacillus persepolensis (Amoozegar et al. 2009) Didari et al. 2012

Synonyms (1)

Bacillus persepolensis

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
29278	positive	2.75 µm	1.25 µm	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
15848	MODIFIED BACTO MARINE BROTH (DSMZ Medium 514d)		Medium recipe at MediaDive	Name: MODIFIED BACTO MARINE BROTH (DSMZ Medium 514d) Composition: Difco marine broth 37.4 g/l Agar 15.0 g/l Malt extract 1.0 g/l Soy peptone 1.0 g/l Pancreatic digest of casein 1.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
29278	positive	growth	25-45
29278	positive	optimum	40	thermophilic
67770	positive	growth	34	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
29278	positive	optimum	8.25
29278	positive	growth	7.0-10.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

29278

Oxygen toleranceaerobe

Spore formation

29278

Spore formationyes

Halophily

@ref	Salt	Growth	Tested relation	Concentration
29278	NaCl	positive	growth	05-20 %
29278	NaCl	positive	optimum	10 %

Observation

67770

Observationquinones: MK-7

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
29278	22653 ChEBI	asparagine	+	carbon source
29278	28757 ChEBI	fructose	+	carbon source
29278	17306 ChEBI	maltose	+	carbon source
29278	17268 ChEBI	myo-inositol	+	carbon source

Enzymes

@ref	Value	Activity	Ec
29278	catalase	+	1.11.1.6
29278	cytochrome oxidase	+	1.9.3.1

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	adipate degradation	100	2 of 2
66794	lipoate biosynthesis	100	5 of 5
66794	ethanol fermentation	100	2 of 2
66794	phenylacetate degradation (aerobic)	100	5 of 5
66794	chorismate metabolism	100	9 of 9
66794	resorcinol degradation	100	2 of 2
66794	butanoate fermentation	100	4 of 4
66794	biotin biosynthesis	100	4 of 4
66794	L-lactaldehyde degradation	100	3 of 3
66794	methylglyoxal degradation	100	5 of 5
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	ppGpp biosynthesis	100	4 of 4
66794	palmitate biosynthesis	100	22 of 22
66794	aspartate and asparagine metabolism	100	9 of 9
66794	cyanate degradation	100	3 of 3
66794	gluconeogenesis	100	8 of 8
66794	aerobactin biosynthesis	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	formaldehyde oxidation	100	3 of 3
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	teichoic acid biosynthesis	100	1 of 1
66794	sulfopterin metabolism	100	4 of 4
66794	propionate fermentation	100	10 of 10
66794	coenzyme A metabolism	100	4 of 4
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	folate polyglutamylation	100	1 of 1
66794	tetrahydrofolate metabolism	92.86	13 of 14
66794	vitamin B1 metabolism	92.31	12 of 13
66794	leucine metabolism	92.31	12 of 13
66794	phenol degradation	90	18 of 20
66794	threonine metabolism	90	9 of 10
66794	valine metabolism	88.89	8 of 9
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	propanol degradation	85.71	6 of 7
66794	reductive acetyl coenzyme A pathway	85.71	6 of 7
66794	heme metabolism	85.71	12 of 14
66794	citric acid cycle	85.71	12 of 14
66794	vitamin B12 metabolism	85.29	29 of 34
66794	phenylalanine metabolism	84.62	11 of 13
66794	1,4-dihydroxy-6-naphthoate biosynthesis	83.33	5 of 6
66794	NAD metabolism	83.33	15 of 18
66794	glycolate and glyoxylate degradation	83.33	5 of 6
66794	glutamate and glutamine metabolism	82.14	23 of 28
66794	peptidoglycan biosynthesis	80	12 of 15
66794	cellulose degradation	80	4 of 5
66794	glycogen metabolism	80	4 of 5
66794	4-hydroxyphenylacetate degradation	80	8 of 10
66794	gallate degradation	80	4 of 5
66794	flavin biosynthesis	80	12 of 15
66794	ethylmalonyl-CoA pathway	80	4 of 5
66794	3-phenylpropionate degradation	80	12 of 15
66794	3-chlorocatechol degradation	80	4 of 5
66794	tryptophan metabolism	78.95	30 of 38
66794	photosynthesis	78.57	11 of 14
66794	serine metabolism	77.78	7 of 9
66794	pyrimidine metabolism	77.78	35 of 45
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	molybdenum cofactor biosynthesis	77.78	7 of 9
66794	alanine metabolism	75.86	22 of 29
66794	isoleucine metabolism	75	6 of 8
66794	glycogen biosynthesis	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	purine metabolism	74.47	70 of 94
66794	proline metabolism	72.73	8 of 11
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	non-pathway related	71.05	27 of 38
66794	myo-inositol biosynthesis	70	7 of 10
66794	methionine metabolism	69.23	18 of 26
66794	degradation of sugar alcohols	68.75	11 of 16
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	enterobactin biosynthesis	66.67	2 of 3
66794	lysine metabolism	66.67	28 of 42
66794	octane oxidation	66.67	2 of 3
66794	acetoin degradation	66.67	2 of 3
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	histidine metabolism	65.52	19 of 29
66794	glycolysis	64.71	11 of 17
66794	pentose phosphate pathway	63.64	7 of 11
66794	androgen and estrogen metabolism	62.5	10 of 16
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	urea cycle	61.54	8 of 13
66794	sulfate reduction	61.54	8 of 13
66794	oxidative phosphorylation	60.44	55 of 91
66794	vitamin K metabolism	60	3 of 5
66794	metabolism of amino sugars and derivatives	60	3 of 5
66794	factor 420 biosynthesis	60	3 of 5
66794	degradation of aromatic, nitrogen containing compounds	58.33	7 of 12
66794	arginine metabolism	58.33	14 of 24
66794	isoprenoid biosynthesis	57.69	15 of 26
66794	benzoyl-CoA degradation	57.14	4 of 7
66794	d-mannose degradation	55.56	5 of 9
66794	4-hydroxymandelate degradation	55.56	5 of 9
66794	phenylpropanoid biosynthesis	53.85	7 of 13
66794	lipid metabolism	51.61	16 of 31
66794	ribulose monophosphate pathway	50	1 of 2
66794	cyclohexanol degradation	50	2 of 4
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	kanosamine biosynthesis II	50	1 of 2
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	pantothenate biosynthesis	50	3 of 6
66794	toluene degradation	50	2 of 4
66794	carnitine metabolism	50	4 of 8
66794	Entner Doudoroff pathway	50	5 of 10
66794	tyrosine metabolism	50	7 of 14
66794	cysteine metabolism	50	9 of 18
66794	quinate degradation	50	1 of 2
66794	ketogluconate metabolism	50	4 of 8
66794	CMP-KDO biosynthesis	50	2 of 4
66794	starch degradation	50	5 of 10
66794	phosphatidylethanolamine bioynthesis	46.15	6 of 13
66794	degradation of hexoses	44.44	8 of 18
66794	degradation of pentoses	42.86	12 of 28
66794	glutathione metabolism	42.86	6 of 14
66794	bile acid biosynthesis, neutral pathway	41.18	7 of 17
66794	coenzyme M biosynthesis	40	4 of 10
66794	glycine metabolism	40	4 of 10
66794	glycine betaine biosynthesis	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	hydrogen production	40	2 of 5
66794	vitamin B6 metabolism	36.36	4 of 11
66794	polyamine pathway	34.78	8 of 23
66794	allantoin degradation	33.33	3 of 9
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	lipid A biosynthesis	33.33	3 of 9
66794	sphingosine metabolism	33.33	2 of 6
66794	arachidonic acid metabolism	33.33	6 of 18
66794	IAA biosynthesis	33.33	1 of 3
66794	nitrate assimilation	33.33	3 of 9
66794	degradation of sugar acids	28	7 of 25
66794	chlorophyll metabolism	27.78	5 of 18
66794	cholesterol biosynthesis	27.27	3 of 11
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	d-xylose degradation	27.27	3 of 11
66794	metabolism of disaccharids	27.27	3 of 11
66794	ascorbate metabolism	27.27	6 of 22
66794	lactate fermentation	25	1 of 4
66794	dTDPLrhamnose biosynthesis	25	2 of 8
66794	carotenoid biosynthesis	22.73	5 of 22

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Environmental	#Aquatic
#Condition	#Saline

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
15848	brine	Howz Soltan Lake	Iran	IRN	Asia
67770	Water from the hypersaline lake Howz-Soltan in Iran

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
15848	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	IMG-taxon 2654588171 annotated assembly for Alteribacillus persepolensis DSM 21632	contig	GCA_900099605	568899.4	2654588171	568899	64.69

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
15848	Bacillus persepolensis partial 16S rRNA gene, type strain HS 136T	FM244839	1474		568899

GC content

@ref	GC-content (mol%)	Method
15848	37.1	thermal denaturation, midpoint method (Tm)
29278	37.1

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Alteribacillus persepolensis DSM 21632
NCBI: GCA_900099605

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	79.60	no
125439	motility	BacteriaNetⓘ	yes	85.70	no
125439	gram_stain	BacteriaNetⓘ	variable	82.00	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	84.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Alteribacillus persepolensis strain DSM 21632
PATRIC: 568899.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	77.34	yes
125438	anaerobic	anaerobicⓘ	no	96.12	no
125438	spore-forming	spore-formingⓘ	yes	87.30	yes
125438	thermophilic	thermophileⓘ	no	83.67	yes
125438	aerobic	aerobicⓘ	yes	79.70	yes
125438	flagellated	motile2+ⓘ	yes	75.12	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aidingibacillus halophilus gen. nov., sp. nov., a novel member of the family Bacillaceae.	Wang Y, Chunyu WX, Jiang GQ, Huang L, Zhang B, Ji Y, Ding ZG, Yin M, Tang SK	Antonie Van Leeuwenhoek	10.1007/s10482-017-0980-x	2017
Phylogeny	Description of Alteribacillus alkaliphilus sp. nov., reassignment of Bacillus iranensis (Bagheri et al. 2012) as Alteribacillus iranensis comb. nov. and emended description of the genus Alteribacillus.	Azmatunnisa Begum M, Varshini V, Rahul K, Chandana A, Sasikala C, Ramana CV	Int J Syst Evol Microbiol	10.1099/ijsem.0.001428	2016
Phylogeny	Alteribacillus bidgolensis gen. nov., sp. nov., a moderately halophilic bacterium from a hypersaline lake, and reclassification of Bacillus persepolensis as Alteribacillus persepolensis comb. nov.	Didari M, Amoozegar MA, Bagheri M, Schumann P, Sproer C, Sanchez-Porro C, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijs.0.034173-0	2012
Phylogeny	Bacillus iranensis sp. nov., a moderate halophile from a hypersaline lake.	Bagheri M, Didari M, Amoozegar MA, Schumann P, Sanchez-Porro C, Mehrshad M, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijs.0.030874-0	2011
Phylogeny	Bacillus persepolensis sp. nov., a moderately halophilic bacterium from a hypersaline lake.	Amoozegar MA, Sanchez-Porro C, Rohban R, Hajighasemi M, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijs.0.010090-0	2009

References

#15848	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21632
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#25694	IJSEM 2352 2009 ( DOI 10.1099/ijs.0.010090-0 , PubMed 19620367 )
#29278	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25694
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Alteribacillus persepolensis (DSM 21632, CCM 7595, JCM 15720)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Pathway annotation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900099605

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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