Name: Klebsiella sp. CCUG 60507
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 156137

Type strain:

Species: Klebsiella sp.

Culture col. no.: CCUG 60507, NCTC 9140

NCBI tax ID(s): 576 (species)

SI-ID 116220

NCTC 9140

Other strains from Klebsiella sp.

K. sp. DSM 4798, ATCC 8724, BUCSAV 143, ...
K. sp. DSM 7460
K. sp. 58, DSM 21696
K. sp. BRL6-2, DSM 25465
K. sp. J1, DSM 101559
K. sp. CCUG 15901
K. sp. CCUG 39852
K. sp. CCUG 47534
K. sp. CCUG 60508, NCTC 9174
K. sp. CCUG 60509

Section

Klebsiella sp. CCUG 60507 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from Human urine.

Gram-negative
aerobe
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Enterobacterales*
	Family	*Enterobacteriaceae*
	Genus	*Klebsiella*
	Full Scientific Name (LPSN)	Klebsiella Trevisan 1885 (Approved Lists 1980)

	Synonym	Calymmatobacterium
	Synonym	Raoultella

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.98

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #62334]			growth	30 °C

[Ref.: #62334]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #62334]

Oxygen tolerance

aerobe

[Ref.: #69480]	Ability of spore formation	no Confidence in %99.926
[Ref.: #69481]	Ability of spore formation	no Confidence in %99

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68374]	arginine ChEBI	-	hydrolysis	* from API ID32E
[Ref.: #68374]	cellobiose ChEBI	+	builds acid from	* from API ID32E
[Ref.: #68374]	D-arabitol ChEBI	+	builds acid from	* from API ID32E
[Ref.: #68374]	D-galacturonic acid ChEBI	+	builds acid from	* from API ID32E
[Ref.: #68374]	D-glucose ChEBI	+	builds acid from	* from API ID32E
[Ref.: #68374]	D-mannitol ChEBI	+	builds acid from	* from API ID32E
[Ref.: #68374]	L-arabinose ChEBI	+	builds acid from	* from API ID32E
[Ref.: #68374]	L-arabitol ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	L-rhamnose ChEBI	+	builds acid from	* from API ID32E
[Ref.: #68374]	lysine ChEBI	+	degradation	* from API ID32E
[Ref.: #68374]	malonate ChEBI	+	assimilation	* from API ID32E
[Ref.: #68374]	maltose ChEBI	+	builds acid from	* from API ID32E
[Ref.: #68374]	myo-inositol ChEBI	+	builds acid from	* from API ID32E
[Ref.: #68374]	ornithine ChEBI	-	degradation	* from API ID32E
[Ref.: #68374]	palatinose ChEBI	+	builds acid from	* from API ID32E
[Ref.: #68374]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API ID32E
[Ref.: #68374]	ribitol ChEBI	+	builds acid from	* from API ID32E
[Ref.: #68374]	sorbitol ChEBI	+	builds acid from	* from API ID32E
[Ref.: #68374]	sucrose ChEBI	+	builds acid from	* from API ID32E
[Ref.: #68374]	trehalose ChEBI	+	builds acid from	* from API ID32E
[Ref.: #68374]	tryptophan ChEBI	-	energy source	* from API ID32E
[Ref.: #68374]	urea ChEBI	-	hydrolysis	* from API ID32E
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68374]		indole ChEBI	no	* from API ID32E

	Physiological tests	Metabolite	Indole test
[Ref.: #68374]		indole ChEBI	-	* from API ID32E

	Enzyme	Enzyme activity	EC number
[Ref.: #68374]	alpha-galactosidase	+	3.2.1.22	* from API ID32E
[Ref.: #68374]	alpha-glucosidase	-	3.2.1.20	* from API ID32E
[Ref.: #68374]	alpha-maltosidase	+		* from API ID32E
[Ref.: #68374]	arginine dihydrolase	-	3.5.3.6	* from API ID32E
[Ref.: #68374]	beta-galactosidase	+	3.2.1.23	* from API ID32E
[Ref.: #68374]	beta-glucosidase	+	3.2.1.21	* from API ID32E
[Ref.: #68374]	beta-glucuronidase	-	3.2.1.31	* from API ID32E
[Ref.: #68374]	L-aspartate arylamidase	+	3.4.11.21	* from API ID32E
[Ref.: #68374]	lipase	-		* from API ID32E
[Ref.: #68374]	lysine decarboxylase	+	4.1.1.18	* from API ID32E
[Ref.: #68374]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API ID32E
[Ref.: #68374]	ornithine decarboxylase	-	4.1.1.17	* from API ID32E
[Ref.: #68374]	urease	-	3.5.1.5	* from API ID32E
	Only first 10 entries are displayed. Click here to see all.

API® ID32E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Ornithine decarboxylaseODC	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Urease/urea hydrolysisURE	Acid from L-arabitolLARL	Acid from D-galacturonic acidGAT	Acid from 5-Ketogluconate5KG	LipaseLIP	Phenol red (Acidification)RP	beta-Glucosidasebeta GLU	Acid from D-mannitolMAN	Acid from maltoseMAL	Acid from D-adonitolADO	Acid from palatinosePLE	beta-Glucuronidasebeta GUR	MalonateMNT	Indole productionIND	N-Acetyl-beta-Glucosaminidasebeta NAG	beta-Galactosidasebeta GAL	Acid from D-glucoseGLU	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	alpha-Glucosidasealpha GLU	alpha-Galactosidasealpha GAL	Acid from trehaloseTRE	Acid from L-rhamnoseRHA	Acid from inositolINO	Acid from cellobioseCEL	Acid from sorbitolSOR	alpha-MaltosidasealphaMAL	L-aspartic acid arylamidaseAspA
[Ref.: #62334]	1930	-	-	+	-	-	+	-	-	-	+	+	+	+	+	-	+	-	-	+	+	+	+	+	-	+	+	+	+	+	+	+	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #62334]	Sample type/isolated from	Human urine
[Ref.: #62334]	Sampling date	1950
[Ref.: #62334]	Country	Denmark
[Ref.: #62334]	Country ISO 3 Code	DNK
[Ref.: #62334]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Human	-
#Host Body Product	#Fluids	#Urine

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Klebsiella pneumoniae NCTC9140	GCA_900451465	contig	GenBank	573 tax ID	*
[Ref.: #66792]	Klebsiella pneumoniae strain NCTC9140	573.20109	wgs	PATRIC	573 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Klebsiella pneumoniae strain NCTC9140 PATRIC: 573.20109
[Ref.: #69481]	spore-forming	no	99	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Klebsiella pneumoniae strain NCTC9140 PATRIC: 573.20109
[Ref.: #69480]	gram-positive	no	97.537	no
[Ref.: #69480]	anaerobic	no	95.879	yes
[Ref.: #69480]	halophile	no	90.503	no
[Ref.: #69480]	spore-forming	no	92.872	no
[Ref.: #69480]	glucose-util	yes	94.204	no
[Ref.: #69480]	flagellated	no	93.204	no
[Ref.: #69480]	aerobic	yes	87.857	no
[Ref.: #69480]	thermophile	no	99.727	yes
[Ref.: #69480]	motile	no	85.443	no
[Ref.: #69480]	glucose-ferment	yes	90.308	no

Availability in culture collections External links

[Ref.: #62334]

Culture collection no.

CCUG 60507, NCTC 9140

[Ref.: #109438]

SI-ID 116220

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#62334 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 60507

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68374

Automatically annotated from API ID32E .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#109438

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID116220.1 )

* These data were automatically processed and therefore are not curated

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Klebsiella pneumoniae strain NCTC9140

Klebsiella pneumoniae strain NCTC9140

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