Name: Streptomyces sclerotialus 147
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 15598

Type strain:

Species: Streptomyces sclerotialus

Strain Designation: 147, 44

Culture col. no.: DSM 43032, ATCC 15721, CBS 167.62, CBS 657.72, DSM 40269, IFO 12246, IFO 13356, IFO 13904, IMRU 3750, ISP 5269, JCM 3039, JCM 4828, KCC A-0039, KCC S-0828, NBRC 13904, RIA 1317, NBRC 12246, NBRC 13356, BCRC 13307, BCRC 15111, CGMCC 4.1484, IFM 1141, KCTC 9065, NRRL B-2317, NRRL ISP-5269, VKM Ac-1909

Strain history: KCC S-0828 <-- IFO 13356 <-- SAJ <-- ISP 5269 <-- M. J. Thirumalachar.

NCBI tax ID(s): 1957 (species)

SI-ID 36452

ATCC 15721, DSM 43032, IFO 12246, DSM 40269, IFO 13356, IFO 13904, JCM 3039, JCM 4828, CCRC 13307, KCTC 9065, NRRL B-2317, VKM Ac-1909, CBS 167.62, CBS 657.72, NBRC 12246, NBRC 13356, NBRC 13904, BCRC 13307, BCRC 15111, CCRC 15111, CGMCC 4.1484

Special Collections

Section

Streptomyces sclerotialus 147 is a spore-forming bacterium that was isolated from soil.

spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces sclerotialus**
	Full Scientific Name (LPSN)	Streptomyces sclerotialus Pridham 1970 (Approved Lists 1980)

Synonym

Chainia antibiotica

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %90.371

Information on culture and growth conditions Culture and growth conditions

[Ref.: #10702]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #10702]

Culture medium growth

[Ref.: #10702]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10702]

Culture medium composition

expand / minimize

[Ref.: #10702]

Culture medium

CZAPEK PEPTONE AGAR (DSMZ Medium 83)

[Ref.: #10702]

Culture medium growth

[Ref.: #10702]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10702]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #10702]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

yes Confidence in %91.194

[Ref.: #67770]

Observation

quinones: MK-9(H₈)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10702]	Sample type/isolated from	soil

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Poona
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence FJ406122 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	1
Soil Samples	34
Animal Samples	5
Plant Samples
Total Samples	40

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #10702]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces sclerotialus 16S rRNA gene, type strain DSM 43032T	AJ621608	1498	GenBank ENA	1957 tax ID	*
[Ref.: #20218]	Streptomyces sclerotialus strain DSM 43032 16S ribosomal RNA gene, partial sequence	FJ406122	1359	GenBank ENA	1957 tax ID	*
[Ref.: #20218]	Streptomyces sclerotialus gene for 16S ribosomal RNA, partial sequence, strain: JCM 3039	D43973	121	GenBank ENA	1957 tax ID	*
[Ref.: #20218]	Streptomyces sclerotialus strain KCTC 9065 16S ribosomal RNA gene, partial sequence	AY999826	1421	GenBank ENA	1957 tax ID	*
[Ref.: #20218]	Streptomyces sclerotialus gene for 16S rRNA, partial sequence, strain: NBRC 12246	AB184071	1476	GenBank ENA	1957 tax ID	*
[Ref.: #20218]	Streptomyces sclerotialus gene for 16S rRNA, partial sequence, strain: NBRC 13904	AB249905	1437	GenBank ENA	1957 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces sclerotialus NRRL ISP-5269	GCA_000720555	contig	GenBank ENA	1957 tax ID
[Ref.: #67770]	Streptomyces sclerotialus NRRL B-2317	GCA_000719105	contig	GenBank ENA	1957 tax ID

[Ref.: #67770]

GC-content

71.9 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces sclerotialus NRRL ISP-5269 NCBI: GCA_000720555.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	90.371	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	97.013	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	88.352	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	91.194	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	94	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	88	no

Availability in culture collections External links

[Ref.: #10702]

Culture collection no.

DSM 43032, ATCC 15721, CBS 167.62, CBS 657.72, DSM 40269, IFO 12246, IFO 13356, IFO 13904, IMRU 3750, ISP 5269, JCM 3039, JCM 4828, KCC A-0039, KCC S-0828, NBRC 13904, RIA 1317, NBRC 12246, NBRC 13356, BCRC 13307, BCRC 15111, CGMCC 4.1484, IFM 1141, KCTC 9065, NRRL B-2317, NRRL ISP-5269, VKM Ac-1909

[Ref.: #84685]

SI-ID 36452

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces tardus sp. nov.: A Slow-Growing Actinobacterium Producing Candicidin, Isolated From Sediments of the Trondheim Fjord.	Kralova S, Sandoval-Powers M, Fawwal DV, Degnes KF, Lewin AS, Klinkenberg G, Nguyen GS, Liles MR, Wentzel A	Front Microbiol	10.3389/fmicb.2021.714233	2021	*
Phylogeny	Streptomyces monticola sp. nov., a novel actinomycete isolated from soil.	Li D, Han L, Zhao J, Ju H, Jiang S, Guo X, Wang X, Xiang W	Antonie Van Leeuwenhoek	10.1007/s10482-018-1177-7	2018	*
Phylogeny	Streptomyces chumphonensis sp. nov., isolated from marine sediments.	Phongsopitanun W, Thawai C, Suwanborirux K, Kudo T, Ohkuma M, Tanasupawat S	Int J Syst Evol Microbiol	10.1099/ijs.0.062992-0	2014	*

References

#10702

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43032

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#84685

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID36452.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces sclerotialus NRRL ISP-5269

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