Anaerobacillus arseniciselenatis (DSM 15340, ATCC 700614, KCTC 5192)

Name: Anaerobacillus arseniciselenatis (DSM 15340, ATCC 700614, KCTC 5192)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1558

Type strain

Strain Designation E1H

Culture col. no. DSM 15340 ATCC 700614 KCTC 5192 E1H

NCBI tax ID(s) 85682

Special Collections DSMZ KCTC

History DSMZ <- ATCC <- J. S. Blum; E1H KCTC <- DSM <- ATCC <- JS Blum, E1H

Links

Anaerobacillus arseniciselenatis E1H is an anaerobe, spore-forming, rod-shaped bacterium that was isolated from anoxic muds.

spore-forming rod-shaped anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 46969

ATCC 700614,DSM 15340,KCTC 5192

@ref 20215

Last LPSN update 2026-05-29 08:25:17

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Anaerobacillus

Species Anaerobacillus arseniciselenatis

Full scientific name Anaerobacillus arseniciselenatis (Switzer Blum et al. 2001) Zavarzina et al. 2010

Synonyms (2)

Bacillus arsenicoselenatis
Bacillus arseniciselenatis

Morphology

Cell morphology

@ref	Cell shape	Motility	Gram stain
67771	rod-shaped
67771			positive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
5855	ANAEROBACILLUS ARSENICISELENATIS MEDIUM (DSMZ Medium 968)		Medium recipe at MediaDive	Name: ANAEROBACILLUS ARSENICISELENATIS MEDIUM (DSMZ Medium 968) Composition: NaCl 89.8204 g/l Na2CO3 10.5788 g/l NaHCO3 4.19162 g/l Na-DL-lactate 1.69661 g/l NaNO3 1.2475 g/l L-Cysteine HCl x H2O 0.249501 g/l Na2S x 9 H2O 0.249501 g/l Yeast extract 0.199601 g/l K2HPO4 0.149701 g/l (NH4)2SO4 0.0998004 g/l KH2PO4 0.0798403 g/l MgSO4 0.0249501 g/l HCl 0.00249501 g/l FeCl2 x 4 H2O 0.00149701 g/l Sodium resazurin 0.000499002 g/l NaOH 0.000499002 g/l CoCl2 x 6 H2O 0.000189621 g/l MnCl2 x 4 H2O 9.98004e-05 g/l ZnCl2 6.98603e-05 g/l Na2MoO4 x 2 H2O 3.59281e-05 g/l NiCl2 x 6 H2O 2.39521e-05 g/l H3BO3 5.98802e-06 g/l Na2WO4 x 2 H2O 3.99202e-06 g/l Na2SeO3 x 5 H2O 2.99401e-06 g/l CuCl2 x 2 H2O 1.99601e-06 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
5855	positive	growth	30
67771	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
5855	anaerobe
67771	anaerobe
125439	obligate aerobe	97.87

Spore formation

@ref	Type of spore	Spore formation
67771	spore

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	coenzyme A metabolism	100	4 of 4
66794	aspartate and asparagine metabolism	100	9 of 9
66794	formaldehyde oxidation	100	3 of 3
66794	L-lactaldehyde degradation	100	3 of 3
66794	gluconeogenesis	100	8 of 8
66794	biotin biosynthesis	100	4 of 4
66794	ppGpp biosynthesis	100	4 of 4
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	methylglyoxal degradation	100	5 of 5
66794	folate polyglutamylation	100	1 of 1
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	molybdenum cofactor biosynthesis	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	serine metabolism	88.89	8 of 9
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	palmitate biosynthesis	86.36	19 of 22
66794	heme metabolism	85.71	12 of 14
66794	reductive acetyl coenzyme A pathway	85.71	6 of 7
66794	leucine metabolism	84.62	11 of 13
66794	1,4-dihydroxy-6-naphthoate biosynthesis	83.33	5 of 6
66794	glutamate and glutamine metabolism	82.14	23 of 28
66794	pentose phosphate pathway	81.82	9 of 11
66794	glycine betaine biosynthesis	80	4 of 5
66794	cellulose degradation	80	4 of 5
66794	hydrogen production	80	4 of 5
66794	propionate fermentation	80	8 of 10
66794	threonine metabolism	80	8 of 10
66794	Entner Doudoroff pathway	80	8 of 10
66794	glycogen metabolism	80	4 of 5
66794	citric acid cycle	78.57	11 of 14
66794	valine metabolism	77.78	7 of 9
66794	NAD metabolism	77.78	14 of 18
66794	vitamin B1 metabolism	76.92	10 of 13
66794	glycogen biosynthesis	75	3 of 4
66794	butanoate fermentation	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	isoleucine metabolism	75	6 of 8
66794	flavin biosynthesis	73.33	11 of 15
66794	peptidoglycan biosynthesis	73.33	11 of 15
66794	purine metabolism	72.34	68 of 94
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	propanol degradation	71.43	5 of 7
66794	pyrimidine metabolism	71.11	32 of 45
66794	starch degradation	70	7 of 10
66794	phenylalanine metabolism	69.23	9 of 13
66794	alanine metabolism	68.97	20 of 29
66794	enterobactin biosynthesis	66.67	2 of 3
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	cyanate degradation	66.67	2 of 3
66794	arginine metabolism	66.67	16 of 24
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	CO2 fixation in Crenarchaeota	66.67	6 of 9
66794	acetoin degradation	66.67	2 of 3
66794	proline metabolism	63.64	7 of 11
66794	d-xylose degradation	63.64	7 of 11
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	ketogluconate metabolism	62.5	5 of 8
66794	urea cycle	61.54	8 of 13
66794	isoprenoid biosynthesis	61.54	16 of 26
66794	cysteine metabolism	61.11	11 of 18
66794	non-pathway related	60.53	23 of 38
66794	oxidative phosphorylation	59.34	54 of 91
66794	methionine metabolism	57.69	15 of 26
66794	photosynthesis	57.14	8 of 14
66794	tetrahydrofolate metabolism	57.14	8 of 14
66794	degradation of sugar alcohols	56.25	9 of 16
66794	nitrate assimilation	55.56	5 of 9
66794	d-mannose degradation	55.56	5 of 9
66794	tryptophan metabolism	55.26	21 of 38
66794	sulfate reduction	53.85	7 of 13
66794	glycolysis	52.94	9 of 17
66794	lipid metabolism	51.61	16 of 31
66794	kanosamine biosynthesis II	50	1 of 2
66794	cis-vaccenate biosynthesis	50	1 of 2
66794	CMP-KDO biosynthesis	50	2 of 4
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	adipate degradation	50	1 of 2
66794	pantothenate biosynthesis	50	3 of 6
66794	tyrosine metabolism	50	7 of 14
66794	ethanol fermentation	50	1 of 2
66794	ribulose monophosphate pathway	50	1 of 2
66794	degradation of aromatic, nitrogen containing compounds	50	6 of 12
66794	sulfopterin metabolism	50	2 of 4
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	glutathione metabolism	50	7 of 14
66794	lysine metabolism	47.62	20 of 42
66794	phenylpropanoid biosynthesis	46.15	6 of 13
66794	vitamin B6 metabolism	45.45	5 of 11
66794	degradation of sugar acids	44	11 of 25
66794	histidine metabolism	41.38	12 of 29
66794	ascorbate metabolism	40.91	9 of 22
66794	phenylacetate degradation (aerobic)	40	2 of 5
66794	coenzyme M biosynthesis	40	4 of 10
66794	lipoate biosynthesis	40	2 of 5
66794	glycine metabolism	40	4 of 10
66794	degradation of pentoses	39.29	11 of 28
66794	phosphatidylethanolamine bioynthesis	38.46	5 of 13
66794	vitamin B12 metabolism	38.24	13 of 34
66794	dTDPLrhamnose biosynthesis	37.5	3 of 8
66794	phenol degradation	35	7 of 20
66794	IAA biosynthesis	33.33	1 of 3
66794	4-hydroxymandelate degradation	33.33	3 of 9
66794	lipid A biosynthesis	33.33	3 of 9
66794	octane oxidation	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	polyamine pathway	30.43	7 of 23
66794	myo-inositol biosynthesis	30	3 of 10
66794	benzoyl-CoA degradation	28.57	2 of 7
66794	degradation of hexoses	27.78	5 of 18
66794	3-phenylpropionate degradation	26.67	4 of 15
66794	methanogenesis from CO2	25	3 of 12
66794	lactate fermentation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	alginate biosynthesis	25	1 of 4
66794	vitamin E metabolism	25	1 of 4
66794	androgen and estrogen metabolism	25	4 of 16
66794	bile acid biosynthesis, neutral pathway	23.53	4 of 17
66794	allantoin degradation	22.22	2 of 9
66794	arachidonic acid metabolism	22.22	4 of 18

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Mud (Sludge)
#Condition	#Anoxic (anaerobic)	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
5855	anoxic muds	California, Mono lake	USA	USA	North America
67771	From anoxic muds	Mono lake, California	USA	USA	North America

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
5855	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM186599v1 assembly for Anaerobacillus arseniciselenatis DSM 15340	contig	GCA_001865995	85682.4	2698536990	85682	46.53

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Bacillus arseniciselenatis 16S rRNA gene, type strain DSM 15340T	AJ865469	1499		85682
5855	Bacillus arseniciselenatis 16S ribosomal RNA gene, partial sequence	AF064705	1533		85682

GC content

@ref	GC-content (mol%)
5855	40
67771	40.0

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM186599v1 assembly for Anaerobacillus arseniciselenatis DSM 15340
NCBI: GCA_001865995

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	97.87	no
125439	gram_stain	BacteriaNetⓘ	variable	59.26	no
125439	motility	BacteriaNetⓘ	yes	71.20	no
125439	spore_formation	BacteriaNetⓘ	yes	87.30	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Anaerobacillus arseniciselenatis strain DSM 15340
PATRIC: 85682.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	72.79	yes
125438	anaerobic	anaerobicⓘ	yes	51.97	yes
125438	aerobic	aerobicⓘ	no	69.88	yes
125438	spore-forming	spore-formingⓘ	yes	86.16	yes
125438	thermophilic	thermophileⓘ	no	83.50	no
125438	flagellated	motile2+ⓘ	yes	69.96	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Purification and characterization of the low molecular weight xylanase from Bacillus cereus L-1.	Zhang G, Li Z, Chen G, Zhang L, Cai W, Deng S, Zhang H, Wu L, Li H, Liu H.	Braz J Microbiol	10.1007/s42770-023-01129-5	2023
	Draft Genome Sequences of Four Alkaliphilic Bacteria Belonging to the Anaerobacillus Genus.	Bassil NM, Lloyd JR.	Genome Announc	10.1128/genomea.01493-16	2017
	Expression, Characterization and Its Deinking Potential of a Thermostable Xylanase From Planomicrobium glaciei CHR43.	Liu Z, Shao T, Li Y, Wu B, Jia H, Hao N.	Front Bioeng Biotechnol	10.3389/fbioe.2021.618979	2021
Enzymology	Purification, characterization and thermostability improvement of xylanase from Bacillus amyloliquefaciens and its application in pre-bleaching of kraft pulp.	Kumar S, Haq I, Prakash J, Singh SK, Mishra S, Raj A.	3 Biotech	10.1007/s13205-017-0615-y	2017
Enzymology	Isolation, purification, and characterization of xylanase produced by a new species of bacillus in solid state fermentation.	Kamble RD, Jadhav AR	Int J Microbiol	10.1155/2012/683193	2012

References

#5855	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15340
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Anaerobacillus arseniciselenatis (DSM 15340, ATCC 700614, KCTC 5192)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Pathway annotation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001865995

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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