Name: Anaerobacillus alkalidiazotrophicus MS 6
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 1559

Type strain:

Species: Anaerobacillus alkalidiazotrophicus

Strain Designation: MS 6

Culture col. no.: DSM 22531, NCCB 100213, UNIQEM U377

Strain history: <- D. Y. Sorokin, Winogradsky Inst. Microbiol., RAS, Moscow, Russia; MS6

NCBI tax ID(s): 472963 (species)

SI-ID 359361

NCCB 100213, DSM 22531

Section

Anaerobacillus alkalidiazotrophicus MS 6 is an anaerobe, spore-forming, mesophilic bacterium that was isolated from soda solonchak soil.

Gram-positive
motile
rod-shaped
spore-forming
anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Anaerobacillus*
	Species	**Anaerobacillus alkalidiazotrophicus**
	Full Scientific Name (LPSN)	Anaerobacillus alkalidiazotrophicus (Sorokin et al. 2008) Zavarzina et al. 2010

Synonym

Bacillus alkalidiazotrophicus

Information on morphological and physiological properties Morphology

[Ref.: #32538]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #32538]	Cell length	03-08 µm

[Ref.: #32538]	Cell width	0.6-1.2 µm

[Ref.: #32538]	Cell shape	rod-shaped

[Ref.: #32538]	Motility	yes
[Ref.: #69480]	Motility	yes Confidence in %96.638

[Ref.: #32538]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16380]

Culture medium

BACILLUS ALKALIDIAZOTROPHICUS MEDIUM (DSMZ Medium 1208)

[Ref.: #16380]

Culture medium growth

[Ref.: #16380]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16380]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #16380]	growth	30 °C
[Ref.: #32538]	growth	15-43 °C
[Ref.: #32538]	optimum	33-35 °C

[Ref.: #16380]	Temperature range	mesophilic
[Ref.: #32538]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #32538]			optimum	9.5
[Ref.: #32538]			growth	7.8-10.6

Information on physiology and metabolism Physiology and metabolism

[Ref.: #16380]	Oxygen tolerance	anaerobe
[Ref.: #32538]	Oxygen tolerance	facultative anaerobe

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #32538]		NaCl		growth	1-6.96	%

[Ref.: #32538]

Observation

aggregates in chains

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #32538]	cellobiose ChEBI	+	carbon source
[Ref.: #32538]	fructose ChEBI	+	carbon source
[Ref.: #32538]	glucose ChEBI	+	carbon source
[Ref.: #32538]	lactose ChEBI	+	carbon source
[Ref.: #32538]	maltose ChEBI	+	carbon source
[Ref.: #32538]	mannitol ChEBI	+	carbon source
[Ref.: #32538]	melibiose ChEBI	+	carbon source
[Ref.: #32538]	raffinose ChEBI	+	carbon source
[Ref.: #32538]	sucrose ChEBI	+	carbon source
[Ref.: #32538]	trehalose ChEBI	+	carbon source

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #32538]		catalase	+	1.11.1.6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16380]	Sample type/isolated from	soda solonchak soil
[Ref.: #16380]	Geographic location (country and/or sea, region)	north-eastern part of the Mongolian dry steppe, Choibalsan province
[Ref.: #16380]	Country	Mongolia
[Ref.: #16380]	Country ISO 3 Code	MNG
[Ref.: #16380]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Condition	#Alkaline	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16380]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16380]	Bacillus alkalidiazotrophicus strain MS 6 16S ribosomal RNA gene, partial sequence	EU143680	1503	ENA	472963 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Anaerobacillus alkalidiazotrophicus DSM 22531	GCA_001866055	contig	GenBank	472963 tax ID	*
[Ref.: #66792]	Anaerobacillus alkalidiazotrophicus strain DSM 22531	472963.4	wgs	PATRIC	472963 tax ID	*
[Ref.: #66792]	Anaerobacillus alkalidiazotrophicus DSM 22531	2839700685	draft	JGI IMG/M	472963 tax ID	*
[Ref.: #66792]	Anaerobacillus alkalidiazotrophicus MS 6	2698536991	draft	JGI IMG/M	472963 tax ID	*

[Ref.: #16380]	GC-content	37.1 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #32538]	GC-content	37.1 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Anaerobacillus alkalidiazotrophicus strain DSM 22531 PATRIC: 472963.4
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Anaerobacillus alkalidiazotrophicus strain DSM 22531 PATRIC: 472963.4
[Ref.: #69480]	gram-positive	yes	84.32	yes
[Ref.: #69480]	anaerobic	no	76.478	no
[Ref.: #69480]	halophile	yes	50.699	no
[Ref.: #69480]	spore-forming	yes	89.444	no
[Ref.: #69480]	glucose-util	yes	88.074	no
[Ref.: #69480]	aerobic	no	86.815	yes
[Ref.: #69480]	flagellated	yes	79.877	no
[Ref.: #69480]	thermophile	no	91.63	yes
[Ref.: #69480]	motile	yes	91.246	yes
[Ref.: #69480]	glucose-ferment	no	82.798	no

Availability in culture collections External links

[Ref.: #16380]

Culture collection no.

DSM 22531, NCCB 100213, UNIQEM U377

[Ref.: #71204]

SI-ID 359361

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bacillus alkalidiazotrophicus sp. nov., a diazotrophic, low salt-tolerant alkaliphile isolated from Mongolian soda soil.	Sorokin ID, Kravchenko IK, Tourova TP, Kolganova TV, Boulygina ES, Sorokin DY	Int J Syst Evol Microbiol	10.1099/ijs.0.65655-0	2008	*

References

#16380

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22531

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#32538

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28756 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#71204

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID359361.1 )

#28756

IJSEM 2459 2008 ( DOI 10.1099/ijs.0.65655-0 , PubMed 18842875 )

* These data were automatically processed and therefore are not curated

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Anaerobacillus alkalidiazotrophicus strain DSM 22531

Anaerobacillus alkalidiazotrophicus strain DSM 22531

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