Name: Salimicrobium album HK 733)
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 1549

Type strain:

Species: Salimicrobium album

Strain Designation: HK 733), HK 733

Culture col. no.: DSM 20748, ATCC 49811, CCM 3517, IAM 12845, JCM 2574, CIP 104820, LMG 17430, NBRC 102360, VKM Ac-1949

Strain history: CIP <- 1996, JCM <- M.V. Hao: strain HK 733 <- CCM

NCBI tax ID(s): 50717 (species)

SI-ID 14419

LMG 17430, ATCC 49811, CCM 3517, DSM 20748, IAM 12845, JCM 2574, CIP 104820, VKM Ac-1949, NBRC 102360

Special Collections

Other strains from Salimicrobium album

Section

Salimicrobium album HK 733) is an obligate aerobe, Gram-positive bacterium that was isolated from solar saltern.

Gram-positive
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Salimicrobium*
	Species	**Salimicrobium album**
	Full Scientific Name (LPSN)	Salimicrobium album (Hao et al. 1985) Yoon et al. 2007

Synonym

Marinococcus albus

Information on morphological and physiological properties Morphology

[Ref.: #116195]	Gram stain	positive

[Ref.: #116195]	Cell shape	coccus-shaped

[Ref.: #116195]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9057]

Culture medium

MARINOCOCCUS ALBUS - MEDIUM (DSMZ Medium 434)

[Ref.: #9057]

Culture medium growth

[Ref.: #9057]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9057]

Culture medium composition

expand / minimize

[Ref.: #38527]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #38527]

Culture medium growth

[Ref.: #38527]

Culture medium composition

expand / minimize

[Ref.: #116195]

Culture medium

CIP Medium 3

[Ref.: #116195]

Culture medium growth

[Ref.: #116195]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #116195]

Culture medium

CIP Medium 9

[Ref.: #116195]

Culture medium growth

[Ref.: #116195]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #116195]

Culture medium

CIP Medium 167

[Ref.: #116195]

Culture medium growth

[Ref.: #116195]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #116195]

Culture medium

CIP Medium 234

[Ref.: #116195]

Culture medium growth

[Ref.: #116195]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #9057]		growth	37 °C
[Ref.: #38527]		growth	30 °C
[Ref.: #67770]		growth	30 °C
[Ref.: #116195]		growth	15-37 °C
[Ref.: #116195]	no	growth	5 °C
[Ref.: #116195]	no	growth	41 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #116195]

Oxygen tolerance

obligate aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #116195]		NaCl		growth	0-10	%

[Ref.: #9057]	Murein short key	A31
[Ref.: #9057]	Murein types	A1gamma m-Dpm-direct

[Ref.: #67770]

Observation

quinones: MK-7

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #116195]	citrate ChEBI	-	carbon source
[Ref.: #116195]	esculin ChEBI	-	hydrolysis
[Ref.: #116195]	glucose ChEBI	-	fermentation
[Ref.: #116195]	lactose ChEBI	-	fermentation
[Ref.: #116195]	nitrate ChEBI	+	reduction
[Ref.: #116195]	nitrate ChEBI	-	respiration
[Ref.: #116195]	nitrite ChEBI	-	reduction
[Ref.: #116195]	sodium thiosulfate ChEBI	-	builds gas from

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #116195]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Metabolite production	Metabolite	Production
[Ref.: #116195]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #116195]		acetoin ChEBI	-
[Ref.: #116195]		glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #116195]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #116195]	amylase	-
[Ref.: #116195]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #116195]	caseinase	-	3.4.21.50
[Ref.: #116195]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #116195]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #116195]	gelatinase	-
[Ref.: #116195]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #116195]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #116195]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #116195]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #116195]	oxidase	+
[Ref.: #116195]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #116195]	protease	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #116195]	tryptophan deaminase	-
[Ref.: #116195]	tween esterase	-
[Ref.: #116195]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #116195]	8226	-	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9057]	Sample type/isolated from	solar saltern

[Ref.: #67770]	Sample type/isolated from	Solar saltern

[Ref.: #116195]	Sample type/isolated from	Solar saltern
* marker position based on {}

Isolation sources categories

#Condition

#Saline

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9057]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #116195]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Marinococcus albus 16S rRNA gene, strain DSM 20748	X90834	1489	GenBank ENA	50717 tax ID	*
[Ref.: #20218]	Salimicrobium album gene for 16S rRNA, partial sequence, strain: NBRC 102360	AB681752	1494	GenBank ENA	50717 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Salimicrobium album DSM 20748	GCA_900107115	scaffold	GenBank ENA	50717 tax ID
[Ref.: #66792]	Salimicrobium album strain DSM 20748	50717.3	wgs	PATRIC	50717 tax ID	*
[Ref.: #66792]	Salimicrobium album DSM 20748	2617270835	draft	JGI IMG/M	50717 tax ID	*

[Ref.: #9057]	GC-content	44.9 mol%
[Ref.: #67770]	GC-content	44.9 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	50 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Salimicrobium album strain DSM 20748 PATRIC: 50717.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	78.18	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.769	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	50.655	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	80.772	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	88.138	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	66.184	no

Availability in culture collections External links

[Ref.: #9057]

Culture collection no.

DSM 20748, ATCC 49811, CCM 3517, IAM 12845, JCM 2574, CIP 104820, LMG 17430, NBRC 102360, VKM Ac-1949

[Ref.: #71194]

SI-ID 14419

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Salimicrobium jeotgali sp. nov., isolated from salted, fermented seafood.	Choi EJ, Jin HM, Kim KH, Jeon CO	Int J Syst Evol Microbiol	10.1099/ijs.0.062042-0	2014	*
Phylogeny	Salimicrobium salexigens sp. nov., a moderately halophilic bacterium from salted hides.	de la Haba RR, Yilmaz P, Sanchez-Porro C, Birbir M, Ventosa A	Syst Appl Microbiol	10.1016/j.syapm.2011.04.002	2011	*

References

#9057

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20748

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#38527 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#71194

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID14419.1 )

#116195 Collection of Institut Pasteur ; Curators of the CIP; CIP 104820
* These data were automatically processed and therefore are not curated

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Salimicrobium album strain DSM 20748

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