Name: Streptomyces polychromogenes T 4473
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 15477

Type strain:

Species: Streptomyces polychromogenes

Strain Designation: T 4473

Culture col. no.: DSM 40316, ATCC 12595, ATCC 25484, CBS 311.56, CBS 912.69, ETH 23877, ETH 31545, IFO 13072, ISP 5316, KCC S-0236, NBRC 13072, NRRL B-12233, RIA 1264, RIA 362, JCM 4505, BCRC 11899, JCM 4236, KCTC 9765, NCIMB 8791, NRRL B-2656, NRRL B-3032, NRRL B-5697, VKM Ac-1207

Strain history: KCC S-0505 <-- IFO 13072 <-- SAJ <-- ISP 5316 <-- G. Hagemann T-4473.

NCBI tax ID(s): 67342 (species)

SI-ID 177137

ATCC 12595, IFO 13072, ATCC 25484, DSM 40316, NRRL B-12233, JCM 4236, CCRC 11899, NCIMB 8791, NRRL B-2656, NRRL B-3032, NRRL B-5697, VKM Ac-1207, JCM 4505, CBS 311.56, KCTC 9765, NBRC 13072, BCRC 11899, NCIB 8791

Special Collections

Other strains from Streptomyces polychromogenes

Section

Streptomyces polychromogenes T 4473 is a bacterium that was isolated from soil.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces polychromogenes**
	Full Scientific Name (LPSN)	Streptomyces polychromogenes Hagemann et al. 1964 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9454]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9454]

Culture medium growth

[Ref.: #9454]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9454]

Culture medium composition

expand / minimize

[Ref.: #9454]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #9454]

Culture medium growth

[Ref.: #9454]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #9454]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #9454]	Name of produced compound	antibiotic T 4473
[Ref.: #9454]	Name of produced compound	o-carbamyl-D serine

	Metabolite production	Metabolite	Production
[Ref.: #67770]		O-carbamyl-D-serine	yes

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9454]	Sample type/isolated from	soil
[Ref.: #9454]	Country	Venezuela
[Ref.: #9454]	Country ISO 3 Code	VEN
[Ref.: #9454]	Continent	Middle and South America

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Country	Venezuela
[Ref.: #67770]	Country ISO 3 Code	VEN
[Ref.: #67770]	Continent	Middle and South America
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY999923 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	230
Soil Samples	4236
Animal Samples	299
Plant Samples	1307
Total Samples	6072

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9454]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces polychromogenes gene for 16S ribosomal RNA, partial sequence, strain: JCM 4505	D44195	120	GenBank ENA	67342 tax ID	*
[Ref.: #20218]	Streptomyces polychromogenes gene for 16S rRNA, partial sequence, strain: NBRC 13072	AB184292	1470	GenBank ENA	67342 tax ID	*
[Ref.: #20218]	Streptomyces polychromogenes strain NRRL B-3032 16S ribosomal RNA gene, partial sequence	AY999923	1326	GenBank ENA	67342 tax ID	*

[Ref.: #67770]

GC-content

74.1 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #9454]

Culture collection no.

DSM 40316, ATCC 12595, ATCC 25484, CBS 311.56, CBS 912.69, ETH 23877, ETH 31545, IFO 13072, ISP 5316, KCC S-0236, NBRC 13072, NRRL B-12233, RIA 1264, RIA 362, JCM 4505, BCRC 11899, JCM 4236, KCTC 9765, NCIMB 8791, NRRL B-2656, NRRL B-3032, NRRL B-5697, VKM Ac-1207

[Ref.: #84564]

SI-ID 177137

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces yangpuensis sp. nov., isolated from soil.	Tang B, Yu Y, Zhi X, Yang L, Cen X, Zhao G, Ding X	Int J Syst Evol Microbiol	10.1099/ijsem.0.000861	2015	*

References

#9454

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40316

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#84564

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID177137.1 )

* These data were automatically processed and therefore are not curated

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