Streptomyces microflavus (DSM 40326, ATCC 25425, CBS 923.69)

Name: Streptomyces microflavus (DSM 40326, ATCC 25425, CBS 923.69)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 15402

Type strain

Culture col. no. DSM 40326 ATCC 25425 CBS 923.69 IFO 13013 ISP 5326 12 more

NCBI tax ID(s) 67269

Special Collections DSMZ JCM KCTC Wink compendium

History <- E.B. Shirling, ISP <- J. Nicot, LCP 68 KCC S-0449 <-- IFO 13013 <-- SAJ <-- ISP 5326 <-- J. Nicot 68.

Links

Streptomyces microflavus DSM 40326 is a plant pathogen of the family Streptomycetaceae.

plant pathogen 16S sequence Bacteria

Name and taxonomic classification

SI-ID 14076

LMG 8582,ATCC 25425,CCRC 12054,DSM 40326,IFO 13013,JCM 4449,NRRL B-3633,VKM Ac-736,CBS 923.69,KCTC 9667,KCTC 9750,AS 4.1627,NBRC 13013,BCRC 12054,CGMCC 4.1627,VTT E-052934

@ref 20215

Last LPSN update 2026-02-09 11:21:41

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces microflavus

Full scientific name Streptomyces microflavus (Krainsky 1914) Waksman and Henrici 1948 (Approved Lists 1980)

Synonyms (13)

Streptomyces fulvissimus
Streptomyces alboviridis
"Actinomyces fulvissimus"
"Actinomyces griseus subsp. alpha"
"Actinomyces lipmanii"
"Actinomyces alboviridis"
Streptomyces griseus subsp. alpha
Streptomyces willmorei
"Actinomyces willmorei"
Streptomyces luridiscabiei
Streptomyces griseus subsp. cretosus
"Actinomyces microflavus"
Streptomyces lipmanii

BacDive ID	Other strains from **Streptomyces microflavus** (41)	Type strain
15206	S. microflavus A26, DSM 40593, ATCC 27431, CBS 783.72, IFO ... (type strain)
15404	S. microflavus Krainsky, DSM 40331, ATCC 13231, ATCC 25474, ... (type strain)
15207	S. microflavus Ihr 582, DSM 40767, ETH 24326, LBG A 3095
15403	S. microflavus DSM 40070, ATCC 19779, ATCC 3331, CBS 532.68, ...
15405	S. microflavus DSM 40459, ATCC 6867, CBS 371.64, CBS 692.72, ...
15406	S. microflavus Wollenweber, DSM 40561, AS 4.1844, ATCC 27903, ...
15407	S. microflavus FH 1371, DSM 40752, ATCC 27357, CGMCC AS ...
15408	S. microflavus JA 4656, DSM 40861, ATCC 3332, ATCC 7717
15409	S. microflavus DSM 40937, AS 4.1843, CBS 219.25, JCM 5078, ...
105488	S. microflavus ST033418(HKI),
127810	S. microflavus ST005115(HKI), China, IMET 40318
127979	S. microflavus ST028277(HKI), FSU-3730, GT20046026,
127980	S. microflavus ST028301(HKI), m59, GT20046035,
127981	S. microflavus SF005184(FSU),
127982	S. microflavus SF006065(FSU),
127983	S. microflavus SF006129(FSU),
127984	S. microflavus SF002711(FSU),
127985	S. microflavus SF004012(FSU),
127986	S. microflavus SF004041(FSU),
127987	S. microflavus SF004078(FSU),
127988	S. microflavus SF004132(FSU),
127989	S. microflavus SF001554(FSU),
127990	S. microflavus SF001575(FSU),
127991	S. microflavus SF004154(FSU),
127992	S. microflavus SF004171(FSU),
127993	S. microflavus SF004174(FSU),
127994	S. microflavus SF004208(FSU),
127995	S. microflavus SF001670(FSU),
127996	S. microflavus SF001834(FSU),
127997	S. microflavus SF001841(FSU),
127998	S. microflavus SF004332(FSU),
127999	S. microflavus SF002411(FSU),
128000	S. microflavus SF006433(FSU),
128001	S. microflavus SF006048(FSU),
128002	S. microflavus SF006364(FSU),
128003	S. microflavus SF006393(FSU),
128004	S. microflavus SF006394(FSU),
128005	S. microflavus SF006391(FSU),
24622	S. microflavus Park S63, DSM 41928, KACC 20252, LMG 21390
159106	S. microflavus 1, DSM 40920
159107	S. microflavus DSM 41001, IMRU 3005

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
9260	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
9260	positive	growth	28
18582	positive	optimum	28
67770	positive	growth	28

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
18582	22599 ChEBI	arabinose	-
68368	29016 ChEBI	arginine	+	hydrolysis	from API 20E
18582	62968 ChEBI	cellulose	+
68368	16947 ChEBI	citrate	+	assimilation	from API 20E
18582	28757 ChEBI	fructose	+
68368	5291 ChEBI	gelatin	+	hydrolysis	from API 20E
18582	17234 ChEBI	glucose	+
68368	25094 ChEBI	lysine	+	degradation	from API 20E
18582	29864 ChEBI	mannitol	+
18582	17268 ChEBI	myo-inositol	-
68368	18257 ChEBI	ornithine	+	degradation	from API 20E
18582	16634 ChEBI	raffinose	-
18582	26546 ChEBI	rhamnose	+
18582	17992 ChEBI	sucrose	-
68368	27897 ChEBI	tryptophan	-	energy source	from API 20E
68368	16199 ChEBI	urea	+	hydrolysis	from API 20E
18582	18222 ChEBI	xylose	-

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Indole test
68368	15688 ChEBI	acetoin	-		from API 20E
68368	35581 ChEBI	indole		-	from API 20E

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	+	3.2.1.24	from API zym
68368	arginine dihydrolase	+	3.5.3.6	from API 20E
68382	beta-galactosidase	+	3.2.1.23	from API zym
68368	beta-galactosidase	+	3.2.1.23	from API 20E
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68382	cystine arylamidase	+	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68368	gelatinase	+		from API 20E
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	+		from API zym
68368	lysine decarboxylase	+	4.1.1.18	from API 20E
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68368	ornithine decarboxylase	+	4.1.1.17	from API 20E
68382	trypsin	+	3.4.21.4	from API zym
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
68368	urease	+	3.5.1.5	from API 20E
68382	valine arylamidase	+		from API zym

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
18582	+	+	+	+	+	-	+	-	-	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
18582	not determinedn.d.	+	+	+	+	+	+	+	+	+	+	+	-	+	-	+	+	+	+	-

Isolation, sampling and environmental information

Taxonmaps

69479

Global distribution of 16S sequence AB184256 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	286
Soil Samples	2441
Animal Samples	1009
Plant Samples	294
Total Samples	4030

Interaction and safety

Risk assessment

@ref	Pathogenicity plant	Biosafety level	Biosafety level comment
9260		1	Risk group (German classification) According to TRBA 466
18582		1	German classification According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptomyces alboviridis strain DSM 40326 16S ribosomal RNA gene, partial sequence	GU383172	779	67269
9260	Streptomyces alboviridis gene for 16S rRNA, partial sequence, strain: NBRC 13013	AB184256	1475	67269
67770	Streptomyces alboviridis strain JCM 4449 16S ribosomal RNA gene, partial sequence	AY999760	1431	67269
124043	Streptomyces alboviridis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4449.	D44146	120	67269

GC content

@ref	GC-content (mol%)	Method
67770	68	fluorimetric

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Identification of environmental Actinobacteria in buildings by means of chemotaxonomy, 16S rRNA sequencing, and MALDI-TOF MS.	Chudzik A, Jalkanen K, Taubel M, Szponar B, Pasciak M.	Microbiol Spectr	10.1128/spectrum.03596-23	2024
Phylogeny	Taxonomic evaluation of the Streptomyces griseus clade using multilocus sequence analysis and DNA-DNA hybridization, with proposal to combine 29 species and three subspecies as 11 genomic species.	Rong X, Huang Y.	Int J Syst Evol Microbiol	10.1099/ijs.0.012419-0	2010
Phylogeny	Phylogenetic relationships in the family Streptomycetaceae using multi-locus sequence analysis.	Labeda DP, Dunlap CA, Rong X, Huang Y, Doroghazi JR, Ju KS, Metcalf WW.	Antonie Van Leeuwenhoek	10.1007/s10482-016-0824-0	2017

References

#9260	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40326
#18582	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68368	Automatically annotated from API 20E .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces microflavus (DSM 40326, ATCC 25425, CBS 923.69)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20E

API zym

Isolation, sampling and environmental information

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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