Name: Streptomyces griseosporeus B-793
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 15280

Type strain:

Species: Streptomyces griseosporeus

Strain Designation: B-793

Culture col. no.: DSM 40562, ATCC 27435, CBS 137.72, CBS 759.72, IFO 13458, ISP 5562, JCM 4766, NBRC 13458, RIA 1419, BCRC 15195, HAMBI 1009, IMET 43543, NRRL B-12498, VKM Ac-1731

Strain history: KCC S-0766 <-- IFO 13458 <-- SAJ <-- ISP 5562 <-- Meiji Seika Kaisha, Ltd.; B-793 (MS 1104).

NCBI tax ID(s): 1910 (species)

SI-ID 39002

ATCC 27435, IFO 13458, DSM 40562, JCM 4766, IMET 43543, NRRL B-12498, VKM Ac-1731, CBS 759.72, NBRC 13458, HAMBI 1009, BCRC 15195, CCRC 15195

Special Collections

Other strains from Streptomyces griseosporeus

Section

Streptomyces griseosporeus B-793 is a spore-forming bacterium that builds an aerial mycelium and produces antibiotic compounds.

antibiotic compound production
spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces griseosporeus**
	Full Scientific Name (LPSN)	Streptomyces griseosporeus Niida and Ogasawara 1960 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #18657]	Colony color	Beige (1001)
[Ref.: #18657]	Incubation period	10-14 days
[Ref.: #18657]	Cultivation medium used	ISP 2

[Ref.: #18657]	Colony color	Brown
[Ref.: #18657]	Incubation period	10-14 days
[Ref.: #18657]	Cultivation medium used	ISP 3

[Ref.: #18657]	Colony color	Yellow
[Ref.: #18657]	Incubation period	10-14 days
[Ref.: #18657]	Cultivation medium used	ISP 5

[Ref.: #18657]	Colony color	Beige (1001)
[Ref.: #18657]	Incubation period	10-14 days
[Ref.: #18657]	Cultivation medium used	ISP 7

[Ref.: #18657]	Incubation period	10-14 days
[Ref.: #18657]	Cultivation medium used	ISP 4

[Ref.: #18657]	Incubation period	10-14 days
[Ref.: #18657]	Cultivation medium used	ISP 6

[Ref.: #18657]	Multicellular complex forming ability	yes
[Ref.: #18657]	Multicellular complex name	Aerial Mycelium
[Ref.: #18657]	Multicellular complex color	White
[Ref.: #18657]	Medium Name (multicellularity)	ISP 2

[Ref.: #18657]	Multicellular complex forming ability	yes
[Ref.: #18657]	Multicellular complex name	Aerial Mycelium
[Ref.: #18657]	Multicellular complex color	Grey
[Ref.: #18657]	Medium Name (multicellularity)	ISP 3

[Ref.: #18657]	Multicellular complex forming ability	yes
[Ref.: #18657]	Multicellular complex name	Aerial Mycelium
[Ref.: #18657]	Multicellular complex color	White/Grey
[Ref.: #18657]	Medium Name (multicellularity)	ISP 4

[Ref.: #18657]	Multicellular complex forming ability	yes
[Ref.: #18657]	Multicellular complex name	Aerial Mycelium
[Ref.: #18657]	Multicellular complex color	White
[Ref.: #18657]	Medium Name (multicellularity)	ISP 5

[Ref.: #18657]	Multicellular complex forming ability	no
[Ref.: #18657]	Medium Name (multicellularity)	ISP 6

[Ref.: #18657]	Multicellular complex forming ability	yes
[Ref.: #18657]	Multicellular complex name	Aerial Mycelium
[Ref.: #18657]	Multicellular complex color	White
[Ref.: #18657]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

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Culture medium

ISP 2

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 3

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 4

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 5

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 6

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 7

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Culture medium growth

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Culture medium composition

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #9644]	growth	28 °C
[Ref.: #18657]	optimum	28 °C
[Ref.: #67770]	growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]	Ability of spore formation	yes Confidence in %92.458
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100

[Ref.: #9644]	Name of produced compound	taitomycin
[Ref.: #20216]	Name of produced compound	Taitomycin
[Ref.: #67770]	Name of produced compound	Taitomycin

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #18657]		NaCl		maximum	5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #18657]	arabinose ChEBI	+/-
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #68368]	citrate ChEBI	-	assimilation	* from API 20E
[Ref.: #18657]	fructose ChEBI	+/-
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #18657]	glucose ChEBI	+
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #18657]	mannitol ChEBI	+/-
[Ref.: #18657]	myo-inositol ChEBI	+/-
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #18657]	raffinose ChEBI	+/-
[Ref.: #18657]	rhamnose ChEBI	+/-
[Ref.: #18657]	sucrose ChEBI	+
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
[Ref.: #18657]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	+		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #68368]	tryptophan deaminase	+	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #18657]	176	+	-	-	-	-	-	-	+	-	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Taito district, Formosa
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18657]	Biosafety level	1	German classification
[Ref.: #9644]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces griseosporeus gene for 16S rRNA, partial sequence	AB122717	564	GenBank ENA	1910 tax ID	*
[Ref.: #20218]	Streptomyces griseosporeus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4766	D44345	120	GenBank ENA	1910 tax ID	*
[Ref.: #20218]	Streptomyces griseosporeus gene for 16S rRNA, partial sequence, strain: NBRC 13458	AB184419	1468	GenBank ENA	1910 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces griseosporeus JCM 4766	GCA_014656055	scaffold	GenBank ENA	1910 tax ID	*
[Ref.: #66792]	Streptomyces griseosporeus strain JCM 4766	1910.4	wgs	PATRIC	1910 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces griseosporeus JCM 4766 NCBI: GCA_014656055.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces griseosporeus JCM 4766 NCBI: GCA_014656055.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	89.955	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.502	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	87.874	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	92.458	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	95.5	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	87.5	no

Availability in culture collections External links

[Ref.: #9644]

Culture collection no.

DSM 40562, ATCC 27435, CBS 137.72, CBS 759.72, IFO 13458, ISP 5562, JCM 4766, NBRC 13458, RIA 1419, BCRC 15195, HAMBI 1009, IMET 43543, NRRL B-12498, VKM Ac-1731

[Ref.: #84374]

SI-ID 39002

References

#9644

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40562

#18657

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#84374

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID39002.1 )

* These data were automatically processed and therefore are not curated

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