Streptomyces griseostramineus (DSM 40161, ATCC 19768, ATCC 23628)

Name: Streptomyces griseostramineus (DSM 40161, ATCC 19768, ATCC 23628)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 15281

Type strain

Strain Designation 10381

Culture col. no. DSM 40161 ATCC 19768 ATCC 23628 CBS 506.68 ETH 28436 12 more

NCBI tax ID(s) 66895

Special Collections DSMZ JCM KCTC Wink compendium

History DSMZ <- E.B. Shirling, ISP <- T.P. Preobrazhenskaya, INA JCM <-- KCC S-0385 <-- IFO 12781 <-- SAJ <-- ISP 5161 <-- INA 10381.

Links

Streptomyces griseostramineus 10381 is a spore-forming bacterium that builds an aerial mycelium and was isolated from soil.

spore-forming genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 38135

ATCC 23628,ATCC 19768,IFO 12781,DSM 40161,JCM 4385,CCRC 12075,NRRL B-5422,VKM Ac-968,CBS 506.68,CECT 3273,KCTC 9878,NBRC 12781,BCRC 12075

@ref 20215

Last LPSN update 2026-05-29 08:28:30

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces griseostramineus

Full scientific name Streptomyces griseostramineus (Preobrazhenskaya et al. 1957) Pridham et al. 1958 (Approved Lists 1980)

Synonyms (1)

"Actinomyces griseostramineus"

BacDive ID	Other strains from **Streptomyces griseostramineus** (1)	Type strain
179181	S. griseostramineus JA04836, STI40164

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125439		91.001
125439		99.253	positive

Colony morphology

@ref	Colony color	Incubation period	Medium used
19416	Yellow	10-14 days	ISP 2
19416	Yellow	10-14 days	ISP 3
19416	Yellow	10-14 days	ISP 4
19416	Yellow	10-14 days	ISP 5
19416	Yellow	10-14 days	ISP 6
19416	Yellow	10-14 days	ISP 7

Multicellular morphology

@ref	Complex name	Complex color	Medium name
19416	Aerial Mycelium	Yellow	ISP 2
19416	Aerial Mycelium	Green	ISP 3
19416	Aerial Mycelium	Green	ISP 4
19416			ISP 5
19416			ISP 6
19416	Aerial Mycelium	Green	ISP 7

Multimedia

@ref:	9357
multimedia content:	DSM_40161.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_40161.jpg
caption:	Medium 84 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
9357	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
19416	ISP 2		Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
19416	ISP 3		Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
19416	ISP 4		Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
19416	ISP 5		Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes
19416	ISP 6		Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
19416	ISP 7		Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes

Culture temp

@ref	Growth	Type	Temperature (°C)
9357	positive	growth	28
19416	positive	optimum	28
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	aerobe	91.045
125439	obligate aerobe	97.401

Spore formation

@ref	Spore description	Spore formation	Confidence
19416	Formation of spore chains: retinaculiapetri, spore surface: warty to hairy
125438			91.403

Halophily

@ref	Salt	Growth	Tested relation	Concentration
19416	NaCl	positive	maximum	5 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
19416	22599 ChEBI	arabinose	+
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
19416	62968 ChEBI	cellulose	-
68368	16947 ChEBI	citrate	-	assimilation	from API 20E
19416	28757 ChEBI	fructose	-
68368	5291 ChEBI	gelatin	+	hydrolysis	from API 20E
19416	17234 ChEBI	glucose	+
68368	25094 ChEBI	lysine	-	degradation	from API 20E
19416	29864 ChEBI	mannitol	-
19416	17268 ChEBI	myo-inositol	-
68368	18257 ChEBI	ornithine	-	degradation	from API 20E
19416	16634 ChEBI	raffinose	-
19416	26546 ChEBI	rhamnose	-
19416	17992 ChEBI	sucrose	-
68368	27897 ChEBI	tryptophan	-	energy source	from API 20E
68368	16199 ChEBI	urea	-	hydrolysis	from API 20E
19416	18222 ChEBI	xylose	+/-

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Indole test
68368	15688 ChEBI	acetoin	-		from API 20E
68368	35581 ChEBI	indole		-	from API 20E

Enzymes

@ref	Value	Activity	Ec
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
68368	beta-galactosidase	+	3.2.1.23	from API 20E
68368	gelatinase	+		from API 20E
68368	lysine decarboxylase	-	4.1.1.18	from API 20E
68368	ornithine decarboxylase	-	4.1.1.17	from API 20E
68368	tryptophan deaminase	+	4.1.99.1	from API 20E
68368	urease	-	3.5.1.5	from API 20E

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
19416	+	-	-	-	-	-	-	+	-	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Country	Continent	Geographic location
9357	soil	USSR	Asia
67770	Soil	USSR		Caucasus

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
9357	1	Risk group (German classification) According to TRBA 466
19416	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1420353v1 assembly for Streptomyces griseomycini CECT 3273	scaffold	GCA_014203535	66898.3	2863283106	66895	63.92
66792	ASM1464963v1 assembly for Streptomyces griseomycini JCM 4385	scaffold	GCA_014649635	66898.4	8113553436	66895	8.45

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptomyces griseomycini gene for 16S ribosomal RNA, partial sequence, strain: JCM 4385	D44100	121	66898
20218	Streptomyces griseomycini gene for 16S rRNA, partial sequence, strain: NBRC 12781	AB184140	1463	66898
124043	Streptomyces griseostramineus strain JCM 4385 16S ribosomal RNA gene, partial sequence.	MT760530	1333	66895

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1420353v1 assembly for Streptomyces griseomycini CECT 3273
BV-BRC: 66898.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	positive	99.25	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	97.40	no
125439	motility	BacteriaNetⓘ	no	91.00	no
125439	spore_formation	BacteriaNetⓘ	yes	83.78	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces griseostramineus CECT 3273
NCBI: GCA_014203535.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.14	no
125438	anaerobic	anaerobicⓘ	no	97.89	no
125438	aerobic	aerobicⓘ	yes	91.05	no
125438	spore-forming	spore-formingⓘ	yes	91.40	no
125438	thermophilic	thermophileⓘ	no	93.50	no
125438	flagellated	motile2+ⓘ	no	89.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Reclassification of Streptomyces griseostramineus as a synonym of Streptomyces griseomycini based on a polyphasic taxonomic approach.	Wang Y, Long P, Fu L, Xiao Y, Wang N, Gao J.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006021	2023
Phylogeny	Diversity and geographic distribution of soil streptomycetes with antagonistic potential against actinomycetoma-causing Streptomyces sudanensis in Sudan and South Sudan.	Hamid ME, Reitz T, Joseph MRP, Hommel K, Mahgoub A, Elhassan MM, Buscot F, Tarkka M.	BMC Microbiol	10.1186/s12866-020-1717-y	2020
Phylogeny	Streptomyces harenosi sp. nov., a home for a gifted strain isolated from Indonesian sand dune soil.	Kusuma AB, Nouioui I, Klenk HP, Goodfellow M.	Int J Syst Evol Microbiol	10.1099/ijsem.0.004346	2020

References

#9357	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40161
#19416	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68368	Automatically annotated from API 20E .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces griseostramineus (DSM 40161, ATCC 19768, ATCC 23628)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20E

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014203535

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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