Streptomyces griseoflavus A 28 No. 1118 is a bacterium that was isolated from garden soil.
genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Kitasatosporales |
| Family Streptomycetaceae |
| Genus Streptomyces |
| Species Streptomyces griseoflavus |
| Full scientific name Streptomyces griseoflavus (Krainsky 1914) Waksman and Henrici 1948 (Approved Lists 1980) |
| Synonyms (1) |
| BacDive ID | Other strains from Streptomyces griseoflavus (4) | Type strain |
|---|---|---|
| 15263 | S. griseoflavus Tü 15, DSM 40698, NRRL 2717, ETH 9578 | |
| 15264 | S. griseoflavus Tü 37, DSM 40709, NRRL 2833, ETH 18897 | |
| 15265 | S. griseoflavus Tü 52, DSM 40717, ETH 23112 | |
| 165007 | S. griseoflavus JCM 4878 |
| @ref: | 9556 |
| multimedia content: | DSM_40456.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_40456.jpg |
| caption: | Medium 65 28°C |
| intellectual property rights: | Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 9556 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 9556 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | Medium recipe at MediaDive | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 18593 | 22599 ChEBI | arabinose | + | ||
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 18593 | 28757 ChEBI | fructose | + | ||
| 68368 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20E |
| 18593 | 17234 ChEBI | glucose | + | ||
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 18593 | 29864 ChEBI | mannitol | + | ||
| 18593 | 17268 ChEBI | myo-inositol | + | ||
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 18593 | 16634 ChEBI | raffinose | + | ||
| 18593 | 26546 ChEBI | rhamnose | + | ||
| 18593 | 17992 ChEBI | sucrose | + | ||
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| 18593 | 18222 ChEBI | xylose | + |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68368 | beta-galactosidase | - | 3.2.1.23 | from API 20E |
| 68368 | gelatinase | + | from API 20E | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 68368 | tryptophan deaminase | + | 4.1.99.1 | from API 20E |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Environmental | #Terrestrial | #Soil | |
| #Engineered | #Agriculture | #Garden |
Global distribution of 16S sequence AB184274 (>99% sequence identity) for Streptomyces from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | ASM1464999v1 assembly for Streptomyces griseoflavus JCM 4479 | scaffold | 35619 | 49.33 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Streptomyces griseoflavus strain JCM 4479 16S ribosomal RNA gene, partial sequence | AY999772 | 1413 | 35619 | ||
| 20218 | Streptomyces griseoflavus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4479 | D44174 | 121 | 35619 | ||
| 20218 | Streptomyces griseoflavus 16S rRNA gene, type strain LMG 19344 | AJ781322 | 1478 | 35619 | ||
| 20218 | Streptomyces griseoflavus gene for 16S rRNA, partial sequence, strain: NBRC 12372 | AB184086 | 1463 | 35619 | ||
| 20218 | Streptomyces griseoflavus gene for 16S rRNA, partial sequence, strain: NBRC 13044 | AB184274 | 1463 | 35619 | ||
| 124043 | Streptomyces griseoflavus strain JCM 4479 16S ribosomal RNA gene, partial sequence. | MT760553 | 1371 | 35619 | ||
| 124043 | Streptomyces griseoflavus strain NBRC 13044 16S ribosomal RNA gene, partial sequence. | KU720585 | 882 | 35619 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | gram_stain | BacteriaNetⓘ | positive | 99.18 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 98.52 | no |
| 125439 | motility | BacteriaNetⓘ | no | 94.39 | no |
| 125439 | spore_formation | BacteriaNetⓘ | yes | 92.95 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 90.32 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 96.57 | no |
| 125438 | spore-forming | spore-formingⓘ | yes | 92.07 | no |
| 125438 | aerobic | aerobicⓘ | yes | 90.80 | no |
| 125438 | thermophilic | thermophileⓘ | no | 94.50 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 88.00 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Analysis of the A549 cell line affected by anticancer bioactive compounds of Actinomycetes isolated from saline soils. | Khoshakhlagh A, Abroun S, Aghaei SS, Soleimani M, Zolfaghari MR. | Arch Microbiol | 10.1007/s00203-022-03258-1 | 2022 | ||
| Genetics | Comparative metagenomic analysis of the oral microbiome in COVID-19 patients and healthy individuals. | Bhanu P, Buchke S, Hemandhar-Kumar N, Varsha P, Kiran SKR, Vikneswaran G, Alva A, Basavaraj GS, Kumar J. | Sci Rep | 10.1038/s41598-024-81864-3 | 2025 | |
| The role of positive charged residue in the proton-transfer mechanism of two-domain laccase from Streptomyces griseoflavus Ac-993. | Gabdulkhakov A, Kolyadenko I, Oliveira P, Tamagnini P, Mikhaylina A, Tishchenko S. | J Biomol Struct Dyn | 10.1080/07391102.2021.1911852 | 2022 | ||
| Impact of altitudinal variations on plant growth dynamics, nutritional composition, and free living rhizospheric N2 fixing bacterial community of Eruca sativa. | Kumar N, Kaur B, Sharma D, Korpole S, Shukla S, Bhardwaj P, Patel MK, Acharya S, Khatri M, Saxena S. | Sci Rep | 10.1038/s41598-025-98242-2 | 2025 | ||
| Genetics | Genomic and Metabolomic Insights into Metabolites of a Streptomyces Isolate Associated with Chromodoris quadricolor, a Red Sea Nudibranch. | Abdelrahman SM, Pratte ZA, El Samak M, Dosoky NS, Hanora AMS, Stewart FJ, Lopanik NB. | Mar Drugs | 10.3390/md23100404 | 2025 | |
| Investigation of diverse biosynthetic secondary metabolites gene clusters using genome mining of indigenous Streptomyces strains isolated from saline soils in Iran. | Khoshakhlagh A, Aghaei SS, Abroun S, Soleimani M, Zolfaghari MR. | Iran J Microbiol | 10.18502/ijm.v14i6.11263 | 2022 | ||
| Structural Insight into the Amino Acid Environment of the Two-Domain Laccase's Trinuclear Copper Cluster. | Kolyadenko I, Tishchenko S, Gabdulkhakov A. | Int J Mol Sci | 10.3390/ijms241511909 | 2023 | ||
| [Incorporation of Copper Ions into T2/T3 Centers of Two-Domain Laccases]. | Gabdulkhakov AG, Kostareva OS, Kolyadenko IA, Mikhaylina AO, Trubitsina LI, Tishchenko SV. | Mol Biol (Mosk) | 10.7868/s0026898418010056 | 2018 | ||
| Metabolism | Engineering the Catalytic Properties of Two-Domain Laccase from Streptomyces griseoflavus Ac-993. | Kolyadenko I, Scherbakova A, Kovalev K, Gabdulkhakov A, Tishchenko S. | Int J Mol Sci | 10.3390/ijms23010065 | 2021 | |
| Tunicamycins from Marine-Derived Streptomyces bacillaris Inhibit MurNAc-Pentapeptide Translocase in Staphylococcus aureus. | Lee J, Hwang JY, Oh D, Oh DC, Park HG, Shin J, Oh KB. | Mar Drugs | 10.3390/md22070293 | 2024 | ||
| Impact of antagonistic endophytic bacteria on productivity of some economically important legumes. | Badawy AM, Badawy AM. | Braz J Microbiol | 10.1007/s42770-023-01204-x | 2024 | ||
| Genetics | Whole-genome sequencing-based characterization of Streptomyces sp. 6(4): focus on natural product. | Borba MP, Witusk JP, Cunha DM, de Lima-Morales D, Martins AF, Van Der Sand S. | Access Microbiol | 10.1099/acmi.0.000466.v3 | 2023 | |
| Enzymology | Crystallization and X-ray diffraction studies of a two-domain laccase from Streptomyces griseoflavus. | Tishchenko S, Gabdulkhakov A, Trubitsina L, Lisov A, Zakharova M, Leontievsky A. | Acta Crystallogr F Struct Biol Commun | 10.1107/s2053230x15014375 | 2015 | |
| iChip-Inspired Isolation, Bioactivities and Dereplication of Actinomycetota from Portuguese Beach Sediments. | Dos Santos JDN, Joao SA, Martin J, Vicente F, Reyes F, Lage OM. | Microorganisms | 10.3390/microorganisms10071471 | 2022 | ||
| Streptomycetaceae and Promicromonosporaceae: Two Actinomycetes Families from Moroccan Oat Soils Enhancing Solubilization of Natural Phosphate. | Bousselham M, Lemriss S, Dhiba D, Aallam Y, Souiri A, Abbas Y, Saidi N, Boukcim H, Hamdali H. | Microorganisms | 10.3390/microorganisms10061116 | 2022 | ||
| Metabolism | Investigations of Accessibility of T2/T3 Copper Center of Two-Domain Laccase from Streptomyces griseoflavus Ac-993. | Gabdulkhakov A, Kolyadenko I, Kostareva O, Mikhaylina A, Oliveira P, Tamagnini P, Lisov A, Tishchenko S. | Int J Mol Sci | 10.3390/ijms20133184 | 2019 | |
| Improvement of aflatoxin B1 degradation ability by Bacillus licheniformis CotA-laccase Q441A mutant. | Liu Y, Guo Y, Liu L, Tang Y, Wang Y, Ma Q, Zhao L. | Heliyon | 10.1016/j.heliyon.2023.e22388 | 2023 | ||
| Enzymology | Kinetics of alkaline protease production by Streptomyces griseoflavus PTCC1130. | Hosseini SV, Saffari Z, Farhanghi A, Atyabi SM, Norouzian D. | Iran J Microbiol | 2016 | ||
| Accessing the specialized metabolome of actinobacteria from the bulk soil of Paullinia cupana Mart. on the Brazilian Amazon: a promising source of bioactive compounds against soybean phytopathogens. | Maimone NM, Apaza-Castillo GA, Quecine MC, de Lira SP. | Braz J Microbiol | 10.1007/s42770-024-01286-1 | 2024 | ||
| In silico evaluation of potential intervention against SARS-CoV-2 RNA-dependent RNA polymerase. | Kapoor S, Singh A, Gupta V. | Phys Chem Earth (2002) | 10.1016/j.pce.2022.103350 | 2023 | ||
| Bioaugmentation failed to enhance oil bioremediation in three soil samples from three different continents. | Radwan SS, Al-Mailem DM, Kansour MK. | Sci Rep | 10.1038/s41598-019-56099-2 | 2019 | ||
| Metabolism | Manipulation of regulatory genes reveals complexity and fidelity in hormaomycin biosynthesis. | Cai X, Teta R, Kohlhaas C, Crusemann M, Ueoka R, Mangoni A, Freeman MF, Piel J. | Chem Biol | 10.1016/j.chembiol.2013.04.018 | 2013 | |
| Genetics | Genomic Investigation of Desert Streptomyces huasconensis D23 Reveals Its Environmental Adaptability and Antimicrobial Activity. | Wen Y, Zhang G, Bahadur A, Xu Y, Liu Y, Tian M, Ding W, Chen T, Zhang W, Liu G. | Microorganisms | 10.3390/microorganisms10122408 | 2022 | |
| Phylogeny | Marine Actinobacteria: Screening for Predation Leads to the Discovery of Potential New Drugs against Multidrug-Resistant Bacteria. | Ibrahimi M, Korichi W, Hafidi M, Lemee L, Ouhdouch Y, Loqman S. | Antibiotics (Basel) | 10.3390/antibiotics9020091 | 2020 | |
| Insights into the biosynthesis of hormaomycin, an exceptionally complex bacterial signaling metabolite. | Hofer I, Crusemann M, Radzom M, Geers B, Flachshaar D, Cai X, Zeeck A, Piel J. | Chem Biol | 10.1016/j.chembiol.2010.12.018 | 2011 | ||
| Metabolism | Mutation of Streptomyces griseoflavus in order to obtain high yield desferrioxamine producing fused cells. | Akbarzadeh A, Norouzian D, Farhangi A, Mehrabi MR, Shafiei M, Zare D, Saffari Z, Mortazavi M, Mardaneh M, Nemati Z. | Pak J Biol Sci | 10.3923/pjbs.2007.4527.4530 | 2007 | |
| Mzabimycins A and B, novel intracellular angucycline antibiotics produced by Streptomyces sp. PAL114 in synthetic medium containing L-tryptophan. | Tata S, Aouiche A, Bijani C, Bouras N, Pont F, Mathieu F, Sabaou N. | Saudi Pharm J | 10.1016/j.jsps.2019.06.004 | 2019 | ||
| Coinoculation of soybean plants with Bradyrhizobium japonicum and Trichoderma harzianum: Coexistence of both microbes and relief of nitrate inhibition of nodulation. | Iturralde ET, Stocco MC, Faura A, Monaco CI, Cordo C, Perez-Gimenez J, Lodeiro AR. | Biotechnol Rep (Amst) | 10.1016/j.btre.2020.e00461 | 2020 | ||
| Cross-Bioaugmentation Among Four Remote Soil Samples Contaminated With Oil Exerted Just Inconsistent Effects on Oil-Bioremediation. | Al-Mailem DM, Kansour MK, Radwan SS. | Front Microbiol | 10.3389/fmicb.2019.02827 | 2019 | ||
| Phylogeny | Genome guided investigation of antibiotics producing actinomycetales strain isolated from a Macau mangrove ecosystem. | Hu D, Chen Y, Sun C, Jin T, Fan G, Liao Q, Mok KM, Lee MS. | Sci Rep | 10.1038/s41598-018-32076-z | 2018 | |
| Metabolism | Use of a halogenase of hormaomycin biosynthesis for formation of new clorobiocin analogues with 5-chloropyrrole moieties. | Heide L, Westrich L, Anderle C, Gust B, Kammerer B, Piel J. | Chembiochem | 10.1002/cbic.200800186 | 2008 | |
| Metabolism | Unusual N-prenylation in diazepinomicin biosynthesis: the farnesylation of a benzodiazepine substrate is catalyzed by a new member of the ABBA prenyltransferase superfamily. | Bonitz T, Zubeil F, Grond S, Heide L. | PLoS One | 10.1371/journal.pone.0085707 | 2013 | |
| Bacterial Consortium for Improved Maize (Zea mays L.) Production. | Olanrewaju OS, Babalola OO. | Microorganisms | 10.3390/microorganisms7110519 | 2019 | ||
| Secondary Metabolites of Actinomycetales as Potent Quorum Sensing Inhibitors Targeting Gram-Positive Pathogens: In Vitro and In Silico Study. | Desouky SE, Abu-Elghait M, Fayed EA, Selim S, Yousuf B, Igarashi Y, Abdel-Wahab BA, Mohammed Alsuhaibani A, Sonomoto K, Nakayama J. | Metabolites | 10.3390/metabo12030246 | 2022 | ||
| The structure of hormaomycin and one of its all-peptide aza-analogues in solution: syntheses and biological activities of new hormaomycin analogues. | Reinscheid UM, Zlatopolskiy BD, Griesinger C, Zeeck A, de Meijere A. | Chemistry | 10.1002/chem.200400977 | 2005 | ||
| First total synthesis of hormaomycin, a naturally occurring depsipeptide with interesting biological activities. | Zlatopolskiy BD, de Meijere A. | Chemistry | 10.1002/chem.200400249 | 2004 | ||
| Pathogenicity | A novel neuronal cell protecting substance mescengricin produced by Streptomyces griseoflavus. | Shin-Ya K, Kim JS, Furihata K, Hayakawa Y, Seto H. | J Asian Nat Prod Res | 10.1080/10286020008039901 | 2000 | |
| Solonamides, a Group of Cyclodepsipeptides, Influence Motility in the Native Producer Photobacterium galatheae S2753. | Zhang SD, Lindqvist LL, Isbrandt T, Borre IL, Wibowo M, Nielsen MW, Ding L, Larsen TO, Gram L. | Appl Environ Microbiol | 10.1128/aem.01105-22 | 2022 | ||
| Enzymology | Characterization of Two VAO-Type Flavoprotein Oxidases from Myceliophthora thermophila. | Ferrari AR, Rozeboom HJ, Vugts ASC, Koetsier MJ, Floor R, Fraaije MW. | Molecules | 10.3390/molecules23010111 | 2018 | |
| Phylogeny | [A new subspecies of Streptomyces griseoflavus]. | Feng Q. | Wei Sheng Wu Xue Bao | 1995 | ||
| Metabolism | Hormaomycins B and C: New Antibiotic Cyclic Depsipeptides from a Marine Mudflat-Derived Streptomyces sp. | Bae M, Chung B, Oh KB, Shin J, Oh DC. | Mar Drugs | 10.3390/md13085187 | 2015 | |
| The functional differentiation of the post-PKS tailoring oxygenases contributed to the chemical diversities of atypical angucyclines. | Fan K, Zhang Q. | Synth Syst Biotechnol | 10.1016/j.synbio.2018.11.001 | 2018 | ||
| Metabolism | Influence of increased dissolved oxygen concentration on productivity and selectivity in cultures of a colabomycin-producing strain of Streptomyces griseoflavus. | Dick O, Onken U, Sattler I, Zeeck A. | Appl Microbiol Biotechnol | 10.1007/bf00939022 | 1994 | |
| Metabolism | New WS9326A Derivatives and One New Annimycin Derivative with Antimalarial Activity are Produced by Streptomyces asterosporus DSM 41452 and Its Mutant. | Zhang S, Zhu J, Zechel DL, Jessen-Trefzer C, Eastman RT, Paululat T, Bechthold A. | Chembiochem | 10.1002/cbic.201700428 | 2018 | |
| PlasmidMaker is a versatile, automated, and high throughput end-to-end platform for plasmid construction. | Enghiad B, Xue P, Singh N, Boob AG, Shi C, Petrov VA, Liu R, Peri SS, Lane ST, Gaither ED, Zhao H. | Nat Commun | 10.1038/s41467-022-30355-y | 2022 | ||
| Biotechnological and pharmaceutical potential of twenty-eight novel type strains of Actinomycetes from different environments worldwide. | Nouioui I, Boldt J, Zimmermann A, Makitrynskyy R, Potter G, Jando M, Doppner M, Kirstein S, Neumann-Schaal M, Gomez-Escribano JP, Nubel U, Mast Y. | Curr Res Microb Sci | 10.1016/j.crmicr.2024.100290 | 2024 | ||
| Enzymology | Metabolic products of microorganisms. 244. Colabomycins, new antibiotics of the manumycin group from Streptomyces griseoflavus. I. Isolation, characterization and biological properties. | Grote R, Zeeck A, Drautz H, Zahner H. | J Antibiot (Tokyo) | 10.7164/antibiotics.41.1178 | 1988 | |
| Metabolism | Physiological analysis of bicozamycin high-producing Streptomyces griseoflavus used at industrial level. | Ochi K, Tsurumi Y, Shigematsu N, Iwami M, Umehara K, Okuhara M. | J Antibiot (Tokyo) | 10.7164/antibiotics.41.1106 | 1988 | |
| Enzymology | Crystal structure of a member of a novel family of dioxygenases (PF10014) reveals a conserved cupin fold and active site. | Xu Q, Grant J, Chiu HJ, Farr CL, Jaroszewski L, Knuth MW, Miller MD, Lesley SA, Godzik A, Elsliger MA, Deacon AM, Wilson IA. | Proteins | 10.1002/prot.24362 | 2014 | |
| Metabolic products of microorganisms. 245. Colabomycins, new antibiotics of the manumycin group from Streptomyces griseoflavus. II. Structure of colabomycin A. | Grote R, Zeeck A, Beale JM. | J Antibiot (Tokyo) | 10.7164/antibiotics.41.1186 | 1988 | ||
| Enzymology | Characterization of cytochrome P450 monooxygenase CYP154H1 from the thermophilic soil bacterium Thermobifida fusca. | Schallmey A, den Besten G, Teune IG, Kembaren RF, Janssen DB. | Appl Microbiol Biotechnol | 10.1007/s00253-010-2965-9 | 2011 | |
| Enzymology | Enzymatic methylation and structure-activity-relationship studies on polycarcin V, a gilvocarcin-type antitumor agent. | Chen JM, Shepherd MD, Horn J, Leggas M, Rohr J. | Chembiochem | 10.1002/cbic.201402426 | 2014 | |
| Genetics | Complete Genome of Micromonospora sp. Strain B006 Reveals Biosynthetic Potential of a Lake Michigan Actinomycete. | Braesel J, Crnkovic CM, Kunstman KJ, Green SJ, Maienschein-Cline M, Orjala J, Murphy BT, Eustaquio AS. | J Nat Prod | 10.1021/acs.jnatprod.8b00394 | 2018 | |
| Metabolism | Restoration of aerial mycelium and antibiotic production in a Streptomyces griseoflavus arginine auxotroph. | Ochi K, Saito Y, Umehara K, Ueda I, Kohsaka M. | J Gen Microbiol | 10.1099/00221287-130-8-2007 | 1984 | |
| (2R,1'S,2'R)- and (2S,1'S,2'R)-3-[2-Mono(di,tri)fluoromethylcyclopropyl]alanines and their incorporation into hormaomycin analogues. | de Meijere A, Kozhushkov SI, Yufit DS, Grosse C, Kaiser M, Raev VA. | Beilstein J Org Chem | 10.3762/bjoc.10.302 | 2014 | ||
| Biotechnology | Proteome-wide alterations in an industrial clavulanic acid producing strain of Streptomyces clavuligerus. | Unsaldi E, Kurt-Kizildogan A, Voigt B, Becher D, Ozcengiz G. | Synth Syst Biotechnol | 10.1016/j.synbio.2016.10.003 | 2017 | |
| Inactivation of gilGT, encoding a C-glycosyltransferase, and gilOIII, encoding a P450 enzyme, allows the details of the late biosynthetic pathway to gilvocarcin V to be delineated. | Liu T, Kharel MK, Fischer C, McCormick A, Rohr J. | Chembiochem | 10.1002/cbic.200600031 | 2006 | ||
| Residual Dipolar Couplings in Structure Determination of Natural Products. | Li GW, Liu H, Qiu F, Wang XJ, Lei XX. | Nat Prod Bioprospect | 10.1007/s13659-018-0174-x | 2018 | ||
| Metabolism | It All Starts with a Sandwich: Identification of Sialidases with Trans-Glycosylation Activity. | Nordvang RT, Nyffenegger C, Holck J, Jers C, Zeuner B, Sundekilde UK, Meyer AS, Mikkelsen JD. | PLoS One | 10.1371/journal.pone.0158434 | 2016 | |
| Metabolism | Translational Control of the SigR-Directed Oxidative Stress Response in Streptomyces via IF3-Mediated Repression of a Noncanonical GTC Start Codon. | Feeney MA, Chandra G, Findlay KC, Paget MSB, Buttner MJ. | mBio | 10.1128/mbio.00815-17 | 2017 | |
| Metabolism | New Concept of the Biosynthesis of 4-Alkyl-L-Proline Precursors of Lincomycin, Hormaomycin, and Pyrrolobenzodiazepines: Could a gamma-Glutamyltransferase Cleave the C-C Bond? | Jiraskova P, Gazak R, Kamenik Z, Steiningerova L, Najmanova L, Kadlcik S, Novotna J, Kuzma M, Janata J. | Front Microbiol | 10.3389/fmicb.2016.00276 | 2016 | |
| An intramolecular inverse electron demand Diels-Alder approach to annulated alpha-carbolines. | Ma Z, Ni F, Woo GH, Lo SM, Roveto PM, Schaus SE, Snyder JK. | Beilstein J Org Chem | 10.3762/bjoc.8.93 | 2012 | ||
| Metabolism | The Novel Transcriptional Regulator LmbU Promotes Lincomycin Biosynthesis through Regulating Expression of Its Target Genes in Streptomyces lincolnensis. | Hou B, Lin Y, Wu H, Guo M, Petkovic H, Tao L, Zhu X, Ye J, Zhang H. | J Bacteriol | 10.1128/jb.00447-17 | 2018 | |
| Pathogenicity | Biosynthetic gene cluster for the polyenoyltetramic acid alpha-lipomycin. | Bihlmaier C, Welle E, Hofmann C, Welzel K, Vente A, Breitling E, Muller M, Glaser S, Bechthold A. | Antimicrob Agents Chemother | 10.1128/aac.00007-06 | 2006 | |
| Metabolism | Two tyrosine residues, Tyr-108 and Tyr-503, are responsible for the deprotonation of phenolic substrates in vanillyl-alcohol oxidase. | Ewing TA, Nguyen QT, Allan RC, Gygli G, Romero E, Binda C, Fraaije MW, Mattevi A, van Berkel WJH. | J Biol Chem | 10.1074/jbc.m117.778449 | 2017 | |
| Phylogeny | A novel taxonomic marker that discriminates between morphologically complex actinomycetes. | Girard G, Traag BA, Sangal V, Mascini N, Hoskisson PA, Goodfellow M, van Wezel GP. | Open Biol | 10.1098/rsob.130073 | 2013 | |
| Enzymology | Streptovirudins, new antibiotics with antibacterial and antiviral activity. I. Culture taxonomy, fermentation and production of streptovirudin complex. | Thrum H, Eckardt K, Bradler G, Fugner R, Tonew E, Tonew M. | J Antibiot (Tokyo) | 10.7164/antibiotics.28.514 | 1975 | |
| Enzymology | Crystal Structure of the Streptomyces coelicolor Sortase E1 Transpeptidase Provides Insight into the Binding Mode of the Novel Class E Sorting Signal. | Kattke MD, Chan AH, Duong A, Sexton DL, Sawaya MR, Cascio D, Elliot MA, Clubb RT. | PLoS One | 10.1371/journal.pone.0167763 | 2016 | |
| Evolution of the total synthesis of (-)-okilactomycin exploiting a tandem oxy-cope rearrangement/oxidation, a Petasis-Ferrier union/rearrangement, and ring-closing metathesis. | Smith AB, Bosanac T, Basu K. | J Am Chem Soc | 10.1021/ja8084669 | 2009 | ||
| Pathogenicity | Streptovirudins -- new antibiotics with antiviral activity. The antiviral spectrum and inhibition of Newcastle disease virus in cell cultures. | Tonew E, Tonew M, Eckardt K, Thrum H, Gumpert B. | Acta Virol | 1975 | ||
| Phylogeny | Comparative genomic and phylogenetic approaches to characterize the role of genetic recombination in mycobacterial evolution. | Smith SE, Showers-Corneli P, Dardenne CN, Harpending HH, Martin DP, Beiko RG. | PLoS One | 10.1371/journal.pone.0050070 | 2012 | |
| Metabolism | The mthA mutation conferring low-level resistance to streptomycin enhances antibiotic production in Bacillus subtilis by increasing the S-adenosylmethionine pool size. | Tojo S, Kim JY, Tanaka Y, Inaoka T, Hiraga Y, Ochi K. | J Bacteriol | 10.1128/jb.01441-13 | 2014 | |
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| Enzymology | Adaptation of an L-proline adenylation domain to use 4-propyl-L-proline in the evolution of lincosamide biosynthesis. | Kadlcik S, Kucera T, Chalupska D, Gazak R, Koberska M, Ulanova D, Kopecky J, Kutejova E, Najmanova L, Janata J. | PLoS One | 10.1371/journal.pone.0084902 | 2013 | |
| Metabolism | SACE_5599, a putative regulatory protein, is involved in morphological differentiation and erythromycin production in Saccharopolyspora erythraea. | Kirm B, Magdevska V, Tome M, Horvat M, Karnicar K, Petek M, Vidmar R, Baebler S, Jamnik P, Fujs S, Horvat J, Fonovic M, Turk B, Gruden K, Petkovic H, Kosec G. | Microb Cell Fact | 10.1186/1475-2859-12-126 | 2013 | |
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| Phylogeny | Polyphasic taxonomic description of Streptomyces okerensis sp. nov. and Streptomyces stoeckheimensis sp. nov. and their biotechnological potential. | Nouioui I, Derr E, Zimmermann A, Jando M, Potter G, Kirstein S, Neumann-Schaal M, Sproer C, Bunk B, Mast Y. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.006716 | 2025 | |
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| #9556 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40456 |
| #18593 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20216 | Curators of the JMRC: Jena Microbial Resource Collection (JMRC): |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68368 | Automatically annotated from API 20E . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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BacDive in 2025: the core database for prokaryotic strain data