Histophilus somni (CCUG 46771, MCCM 00338)

Name: Histophilus somni (CCUG 46771, MCCM 00338)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 152431

Type strain

Culture col. no. CCUG 46771 MCCM 00338

NCBI tax ID(s) 731

Special Collections CCUG

Links

Histophilus somni CCUG 46771 is a microaerophile bacterium that was isolated from Ovine vagina,diseased animal.

microaerophile 16S sequence Bacteria

Name and taxonomic classification

SI-ID 54504

CCUG 19806,CCUG 46771

@ref 20215

Last LPSN update 2026-05-29 08:42:35

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pasteurellales

Family Pasteurellaceae

Genus Histophilus

Species Histophilus somni

Full scientific name Histophilus somni Angen et al. 2003

BacDive ID	Other strains from **Histophilus somni** (20)	Type strain
11751	H. somni 8025, DSM 23850, ATCC 43625, CCUG 36157, ... (type strain)
134745	H. somni 902, CIP 58.64
134746	H. somni 905, CIP 58.65
135735	H. somni CIP 107671
137582	H. somni 872, CIP 58.63
138525	H. somni 8917974, CIP 107676, ATCC 700025
147122	H. somni CCUG 32899
147905	H. somni CCUG 34464
152429	H. somni CCUG 46769
152430	H. somni CCUG 46770, MCCM 03030
152432	H. somni CCUG 46772, MCCM 00330
152433	H. somni CCUG 46773, MCCM 02133
152434	H. somni CCUG 46774, MCCM 03029
152435	H. somni CCUG 46775, MCCM 03031
152553	H. somni CCUG 47046
152554	H. somni CCUG 47047
152555	H. somni CCUG 47048
152556	H. somni CCUG 47049
152557	H. somni CCUG 47050
156451	H. somni CCUG 61857

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
57338	positive	growth	37

Physiology and metabolism

Oxygen tolerance

57338

Oxygen tolerancemicroaerophile

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68377	15824 ChEBI	D-fructose	-	builds acid from	from API NH
68377	17634 ChEBI	D-glucose	+	builds acid from	from API NH
68377	17306 ChEBI	maltose	-	builds acid from	from API NH
68377	18257 ChEBI	ornithine	+	degradation	from API NH
68377	17992 ChEBI	sucrose	-	builds acid from	from API NH
68377	27897 ChEBI	tryptophan	-	energy source	from API NH
68377	16199 ChEBI	urea	-	hydrolysis	from API NH

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68377	35581 ChEBI	indole		from API NH

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68377	35581 ChEBI	indole	-	from API NH

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68377	alkaline phosphatase	-	3.1.3.1	from API NH
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68377	beta-galactosidase	-	3.2.1.23	from API NH
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	+	3.2.1.31	from API zym
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68377	gamma-glutamyltransferase	+	2.3.2.2	from API NH
68382	leucine arylamidase	+	3.4.11.1	from API zym
68377	lipase	-		from API NH
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68377	ornithine decarboxylase	+	4.1.1.17	from API NH
68377	proline-arylamidase	-	3.4.11.5	from API NH
68382	trypsin	-	3.4.21.4	from API zym
68377	tryptophan deaminase	-	4.1.99.1	from API NH
68377	urease	-	3.5.1.5	from API NH
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

57338

Fatty acid	Percentage	ECL
C16:1 ω7c	38.5	15.819
C16:0	29.9	16
C18:1 ω7c /12t/9t	9.7	17.824
C14:0	5.4	14
C18:2 ω6,9c/C18:0 ANTE	4.1	17.724
C12:0	3.6	12
C18:0	3	18
C18:1 ω9c	2.5	17.769
C20:1 ω7c	1.5	19.833
unknown 14.503	0.6	14.503
C18:1 ω5c	0.4	17.919
C20:0	0.2	20
C20:4 ω6,9,12,15c	0.2	19.395
Unidentified	0.2	15.176
C16:1 ω5c	0.2	15.908
Unidentified	0.1	13.933

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
57338	-	-	-	-	-	+	-	-	-	-	+	+	-	-	+	-	-	-	-	-

API NH

@ref	PEN	GLU	FRU	MAL	SAC	ODC	URE	LIP	PAL	beta GAL	ProA	GGT	IND
57338	not determinedn.d.	+	-	-	-	+	-	-	-	-	-	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Caprinae (Sheep/Goat)
#Host Body-Site	#Urogenital tract	#Vagina

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
57338	Ovine vagina,diseased animal	Canada	CAN	North America

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
124043	Histophilus somni CCUG 46771 16S ribosomal RNA (rrn) gene, partial sequence.	AF549397	1357		731

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#57338	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 46771
#68377	Automatically annotated from API NH .
#68382	Automatically annotated from API zym .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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