Name: Streptomyces virginiae A 3823
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 15097

Type strain:

Species: Streptomyces virginiae

Strain Designation: A 3823, BJ-613

Culture col. no.: DSM 1042, ATCC 15413, DSM 40804, JCM 4982, CBS 981.72, CECT 3199, IMET 43705, NCIMB 12603

Strain history: KCC S-0982 <-- DSM 40804 <-- H. D. Tresner BJ-613 (Eli Lilly & Co.; A 3823).

NCBI tax ID(s): 1961 (species)

SI-ID 46533

ATCC 15413, JCM 4982, DSM 40804, IMET 43705, NCIMB 12603, CBS 981.72, CECT 3199, KACC 20086, DSM 1042

Other strains from Streptomyces virginiae

S. virginiae NA 255-88 (M808), DSM 40094, ATCC ... (type strain)
S. virginiae DSM 916, JCM 4974, NRRL 3630, UC ...
S. virginiae DSM 40669, IMRU 3652
S. virginiae ST005091(HKI), ChinaN-390,
S. virginiae ST005092(HKI), JA10088, IMET 40273
S. virginiae JCM 4093, IFO 3392, NBRC 3392

Section

Streptomyces virginiae A 3823 is a mesophilic bacterium that was isolated from soil.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces virginiae**
	Full Scientific Name (LPSN)	Streptomyces virginiae Grundy et al. 1952 (Approved Lists 1980)

Synonym

Streptomyces cinnamonensis

Information on morphological and physiological properties Morphology

Multimedia content

[Ref.: #484]

Caption:

Medium 65 28°C

[Ref.: #484]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #484]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #484]

Culture medium growth

[Ref.: #484]

Culture medium link

Medium recipe at MediaDive

[Ref.: #484]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #484]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #484]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #484]	Name of produced compound	antibiotic A 3823
[Ref.: #484]	Name of produced compound	6- (3-methyl-2-butenyl)-1-phenanzinecarboxylic acid
[Ref.: #20216]	Name of produced compound	Antibiotic agent
[Ref.: #67770]	Name of produced compound	Antibiotic A 3823

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #484]	Sample type/isolated from	soil
[Ref.: #484]	Geographic location (country and/or sea, region)	Arizona
[Ref.: #484]	Country	USA
[Ref.: #484]	Country ISO 3 Code	USA
[Ref.: #484]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #484]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces cinnamonensis strain DSM 1042 16S ribosomal RNA (rrsA) gene, partial sequence	FJ652621	1448	ENA	1900 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces cinnamonensis DSM 1042	2582581517	draft	JGI IMG/M	1900 tax ID	*
[Ref.: #66792]	Streptomyces cinnamonensis ATCC15413	651716690	draft	JGI IMG/M	1900 tax ID	*

Availability in culture collections External links

[Ref.: #484]

Culture collection no.

DSM 1042, ATCC 15413, DSM 40804, JCM 4982, CBS 981.72, CECT 3199, IMET 43705, NCIMB 12603

[Ref.: #84204]

SI-ID 46533

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	The biosynthetic genes for prenylated phenazines are located at two different chromosomal loci of Streptomyces cinnamonensis DSM 1042.	Seeger K, Flinspach K, Haug-Schifferdecker E, Kulik A, Gust B, Fiedler HP, Heide L	Microb Biotechnol	10.1111/j.1751-7915.2010.00234.x	2010	*
Metabolism	A soluble, magnesium-independent prenyltransferase catalyzes reverse and regular C-prenylations and O-prenylations of aromatic substrates.	Haagen Y, Unsold I, Westrich L, Gust B, Richard SB, Noel JP, Heide L	FEBS Lett	10.1016/j.febslet.2007.05.031	2007	*
Metabolism	Biosynthesis of the isoprenoid moieties of furanonaphthoquinone I and endophenazine A in Streptomyces cinnamonensis DSM 1042.	Bringmann G, Haagen Y, Gulder TA, Gulder T, Heide L	J Org Chem	10.1021/jo0703404	2007	*
Enzymology	A gene cluster for prenylated naphthoquinone and prenylated phenazine biosynthesis in Streptomyces cinnamonensis DSM 1042.	Haagen Y, Gluck K, Fay K, Kammerer B, Gust B, Heide L	Chembiochem	10.1002/cbic.200600338	2006	*
Metabolism	[Induction of antibiotic production in inactive cultures of actinomycetes. Monensin production by a mutant strain 2608 EB-1].	Malkina ND, Lazhko EI, Lysenkova LN, Dudnik IuV	Antibiot Khimioter		1995	*

References

#484	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 1042

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#84204

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID46533.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Streptomyces cinnamonensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF