Cite this strain

Desulfovibrio sp. (CCUG 42192)

Name: Desulfovibrio sp. (CCUG 42192)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 150752

Type strain

Culture col. no. CCUG 42192

NCBI tax ID(s) 885

Special Collections CCUG

Links

CCUG 42192 is an anaerobe, mesophilic prokaryote that was isolated from Clay 30% and crushed rock 70%.

anaerobe mesophilic

Name and taxonomic classification

SI-ID 409291

CCUG 42192

@ref 20215

Last LPSN update 2025-12-16 10:06:10

Domain Pseudomonadati

Phylum Thermodesulfobacteriota

Class Desulfovibrionia

Order Desulfovibrionales

Family Desulfovibrionaceae

Genus Desulfovibrio

Full scientific name Desulfovibrio Kluyver and van Niel 1936 (Approved Lists 1980)

Synonyms (8)

"Frigididesulfovibrio"
"Alteridesulfovibrio"
Desulfomonas
"Aminidesulfovibrio"
"Psychrodesulfovibrio"
"Aminidesulfovibrio"
"Frigididesulfovibrio"
"Alteridesulfovibrio"

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
55356	positive	growth	30-37	mesophilic

Physiology and metabolism

Oxygen tolerance

55356

Oxygen toleranceanaerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	29016 ChEBI	arginine	-	hydrolysis	from API rID32A
68380	16024 ChEBI	D-mannose	-	fermentation	from API rID32A
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68380	35581 ChEBI	indole	-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68380	alanine arylamidase	-	3.4.11.2	from API rID32A
68380	alkaline phosphatase	-	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68380	alpha-glucosidase	-	3.2.1.20	from API rID32A
68380	arginine dihydrolase	-	3.5.3.6	from API rID32A
68380	beta-galactosidase	-	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	-		from API rID32A
68380	histidine arylamidase	-		from API rID32A
68380	L-arginine arylamidase	-		from API rID32A
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	-	3.4.11.1	from API rID32A
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68380	phenylalanine arylamidase	-		from API rID32A
68380	proline-arylamidase	-	3.4.11.5	from API rID32A
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	-		from API rID32A
68380	urease	-	3.5.1.5	from API rID32A

Fatty acid profile

Metadata FA analysis

@ref

55356

Fatty acid	Percentage	ECL
C15:1 ω8c	20.8	14.792
C13:0 3OH/C15:1 i I/H	8.8	14.469
C15:0	7.2	15
C16:1 ω9c	4.9	15.774
C11:0 iso	4.3	10.605
C11:0	4.2	11
C11:0 3OH	3.8	12.441
C12:0 3OH	3.4	13.455
C17:1 ω8c	3.3	16.792
C14:0 ISO 3OH	3.3	15.117
C16:0	2.6	16
C18:2 ω6,9c/C18:0 ANTE	2.4	17.724
C10:0	2.4	10
C14:0	1.9	14
Unidentified	1.8	13.321
Unidentified	1.8	12.675
C13:0	1.5	13
Unidentified	1.3	13.684
Unidentified	1.3	15.285
Unidentified	1.2	10.912
C16:1 ω7c/C15:0 ISO 2OH	1.2	15.85
C13:0 ISO 3OH	1.2	14.11
Unidentified	1.2	11.252
C17:0	1.1	17
Unidentified	1.1	11.661
C18:1 ω9c	1.1	17.769
C16:1 ω7c	0.8	15.819
C9:0	0.8	9
Unidentified	0.7	10.243
C15:0 ISO	0.7	14.621
C13:0 ISO 2OH	0.7	13.814
Unidentified	0.7	14.279
C17:1 ω6c	0.6	16.862
C13:0 iso	0.5	12.612

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
55356	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
55356	Clay (bentonite) 30% and crushed rock 70%	1999	Oskarshamn	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#55356	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 42192
#68380	Automatically annotated from API rID32A .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Desulfovibrio sp. (CCUG 42192)

Name and taxonomic classification

Morphology