Name: Streptomyces arenae NA 269-M2
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 15001

Type strain:

Species: Streptomyces arenae

Strain Designation: NA 269-M2

Culture col. no.: DSM 40293, ATCC 25428, CBS 926.69, ETH 24429, IFO 13016, ISP 5293, NBRC 13016, NRRL 2377, RIA 1208, JCM 4452, BCRC 11827, CGMCC 4.1610, VKM Ac-1201

Strain history: KCC S-0452 <-- IFO 13016 <-- SAJ <-- ISP 5293 <-- Abbott Labs.; NA269-M2.

NCBI tax ID(s): 29301 (species)

SI-ID 38548

ATCC 25428, IFO 13016, NRRL 2377, DSM 40293, JCM 4452, CCRC 11827, VKM Ac-1201, CBS 926.69, NBRC 13016, BCRC 11827, ICMP 950, AS 4.1610, CGMCC 4.1610

Special Collections

Other strains from Streptomyces arenae

Section

Streptomyces arenae NA 269-M2 is a spore-forming bacterium that builds an aerial mycelium and produces antibiotic compounds.

antibiotic compound production
spore-forming
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces arenae**
	Full Scientific Name (LPSN)	Streptomyces arenae Pridham et al. 1958 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #19433]	Incubation period	10-14 days
[Ref.: #19433]	Cultivation medium used	ISP 2

[Ref.: #19433]	Incubation period	10-14 days
[Ref.: #19433]	Cultivation medium used	ISP 3

[Ref.: #19433]	Incubation period	10-14 days
[Ref.: #19433]	Cultivation medium used	ISP 4

[Ref.: #19433]	Incubation period	10-14 days
[Ref.: #19433]	Cultivation medium used	ISP 5

[Ref.: #19433]	Multicellular complex forming ability	yes
[Ref.: #19433]	Multicellular complex name	Aerial Mycelium
[Ref.: #19433]	Multicellular complex color	Grey
[Ref.: #19433]	Medium Name (multicellularity)	ISP 2

[Ref.: #19433]	Multicellular complex forming ability	yes
[Ref.: #19433]	Multicellular complex name	Aerial Mycelium
[Ref.: #19433]	Multicellular complex color	White
[Ref.: #19433]	Medium Name (multicellularity)	ISP 3

[Ref.: #19433]	Multicellular complex forming ability	yes
[Ref.: #19433]	Multicellular complex name	Aerial Mycelium
[Ref.: #19433]	Multicellular complex color	White
[Ref.: #19433]	Medium Name (multicellularity)	ISP 4

[Ref.: #19433]	Multicellular complex forming ability	yes
[Ref.: #19433]	Multicellular complex name	Aerial Mycelium
[Ref.: #19433]	Multicellular complex color	Grey
[Ref.: #19433]	Medium Name (multicellularity)	ISP 5

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9438]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9438]

Culture medium growth

[Ref.: #9438]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9438]

Culture medium composition

expand / minimize

[Ref.: #19433]

Culture medium

ISP 2

[Ref.: #19433]

Culture medium growth

[Ref.: #19433]

Culture medium composition

expand / minimize

[Ref.: #19433]

Culture medium

ISP 3

[Ref.: #19433]

Culture medium growth

[Ref.: #19433]

Culture medium composition

expand / minimize

[Ref.: #19433]

Culture medium

ISP 4

[Ref.: #19433]

Culture medium growth

[Ref.: #19433]

Culture medium composition

expand / minimize

[Ref.: #19433]

Culture medium

ISP 5

[Ref.: #19433]

Culture medium growth

[Ref.: #19433]

Culture medium composition

expand / minimize

[Ref.: #9438]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #9438]

Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #9438]	growth	28 °C
[Ref.: #19433]	optimum	30 °C
[Ref.: #67770]	growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #19433]	Spore description	Formation of spore chains: spira, spore surface: spiny
[Ref.: #19433]	Ability of spore formation	yes

[Ref.: #9438]	Name of produced compound	mycomycetin
[Ref.: #67770]	Name of produced compound	Mycomycetin

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #19433]	arabinose ChEBI	+
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #19433]	cellulose ChEBI	+
[Ref.: #68368]	citrate ChEBI	-	assimilation	* from API 20E
[Ref.: #19433]	fructose ChEBI	+
[Ref.: #68368]	gelatin ChEBI	+	hydrolysis	* from API 20E
[Ref.: #19433]	glucose ChEBI	+
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #19433]	mannitol ChEBI	+
[Ref.: #19433]	myo-inositol ChEBI	+
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #19433]	raffinose ChEBI	+
[Ref.: #19433]	rhamnose ChEBI	+
[Ref.: #19433]	sucrose ChEBI	+
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
[Ref.: #19433]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	+		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	-	3.2.1.23	* from API 20E
[Ref.: #68368]	gelatinase	+		* from API 20E
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19433]	296	-	-	-	-	-	-	-	-	-	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9438]	Sample type/isolated from	soil
[Ref.: #9438]	Geographic location (country and/or sea, region)	Illinois
[Ref.: #9438]	Country	USA
[Ref.: #9438]	Country ISO 3 Code	USA
[Ref.: #9438]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9438]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19433]	Biosafety level	1	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces arenae partial 16S rRNA gene, strain ISP 5293	AJ399485	1447	GenBank ENA	29301 tax ID	*
[Ref.: #20218]	Streptomyces arenae gene for 16S ribosomal RNA, partial sequence, strain: JCM 4452	D44149	121	GenBank ENA	29301 tax ID	*
[Ref.: #20218]	Streptomyces arenae gene for 16S rRNA, partial sequence, strain: NBRC 13016	AB249977	1451	GenBank ENA	29301 tax ID	*

[Ref.: #67770]

GC-content

72.9 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #9438]

Culture collection no.

DSM 40293, ATCC 25428, CBS 926.69, ETH 24429, IFO 13016, ISP 5293, NBRC 13016, NRRL 2377, RIA 1208, JCM 4452, BCRC 11827, CGMCC 4.1610, VKM Ac-1201

[Ref.: #84109]

SI-ID 38548

Literature:

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	A strain of Streptomyces sp. isolated from rhizospheric soil of Crataegus oxycantha producing nalidixic acid, a synthetic antibiotic.	Arora N, Kumar S, Satti NK, Ali A, Gupta P, Katoch M	J Appl Microbiol	10.1111/jam.13736	2018	*

References

#9438

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40293

#19433

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#84109

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID38548.1 )

* These data were automatically processed and therefore are not curated

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