Abiotrophia defectiva (CCUG 36937)

Name: Abiotrophia defectiva (CCUG 36937)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 149144

Type strain

Culture col. no. CCUG 36937

NCBI tax ID(s) 46125

Special Collections CCUG

Links

Abiotrophia defectiva CCUG 36937 is a microaerophile prokaryote that was isolated from Human blood,endocarditis,70-yr-old man.

microaerophile

Name and taxonomic classification

SI-ID 14090

LMG 19523,CCUG 36937

@ref 20215

Last LPSN update 2025-12-16 10:05:47

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Aerococcaceae

Genus Abiotrophia

Species Abiotrophia defectiva

Full scientific name Abiotrophia defectiva (Bouvet et al. 1989) Kawamura et al. 1995

Synonyms (1)

Streptococcus defectivus

BacDive ID	Other strains from **Abiotrophia defectiva** (37)	Type strain
135184	A. defectiva CIP 103895
135892	A. defectiva C4, CIP 103892
135893	A. defectiva PE7, CIP 103893, ATCC 700209
135894	A. defectiva D5, CIP 103894
144952	A. defectiva CCUG 27280 A
145171	A. defectiva CCUG 27805
145172	A. defectiva CCUG 27806
145173	A. defectiva CCUG 27807
145174	A. defectiva CCUG 27808
145313	A. defectiva CCUG 28152
145981	A. defectiva CCUG 30076
146223	A. defectiva CCUG 30642
146761	A. defectiva CCUG 32076
147157	A. defectiva CCUG 32966 B
147409	A. defectiva CCUG 33542
148055	A. defectiva CCUG 34739
148519	A. defectiva CCUG 35584
149662	A. defectiva CCUG 38140
149983	A. defectiva CCUG 38793
150007	A. defectiva CCUG 38830
150039	A. defectiva CCUG 38904
150104	A. defectiva CCUG 38998
150280	A. defectiva CCUG 39479
150286	A. defectiva CCUG 39499
150539	A. defectiva CCUG 41537
152179	A. defectiva CCUG 45983
152186	A. defectiva CCUG 46001
152516	A. defectiva CCUG 46990 B
152552	A. defectiva CCUG 47045
152579	A. defectiva CCUG 47112
153374	A. defectiva CCUG 49368
154020	A. defectiva CCUG 52016
154929	A. defectiva CCUG 55745
155280	A. defectiva CCUG 57181
155432	A. defectiva CCUG 57749
155940	A. defectiva CCUG 59700
156779	A. defectiva CCUG 65103

Morphology

Colony morphology

53499

Incubation period3 days

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

53499

Oxygen tolerancemicroaerophile

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68381	40585 ChEBI	alpha-cyclodextrin	-	builds acid from	from API rID32STR
68381	29016 ChEBI	arginine	-	hydrolysis	from API rID32STR
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68379	17634 ChEBI	D-glucose	+	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68381	16899 ChEBI	D-mannitol	-	builds acid from	from API rID32STR
68381	16988 ChEBI	D-ribose	-	builds acid from	from API rID32STR
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68381	16443 ChEBI	D-tagatose	-	builds acid from	from API rID32STR
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	-	hydrolysis	from API Coryne
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
68381	28087 ChEBI	glycogen	-	builds acid from	from API rID32STR
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
68381	606565 ChEBI	hippurate	-	hydrolysis	from API rID32STR
68381	30849 ChEBI	L-arabinose	-	builds acid from	from API rID32STR
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68381	17716 ChEBI	lactose	-	builds acid from	from API rID32STR
68381	17306 ChEBI	maltose	+	builds acid from	from API rID32STR
68379	17306 ChEBI	maltose	+	fermentation	from API Coryne
68381	6731 ChEBI	melezitose	-	builds acid from	from API rID32STR
68381	28053 ChEBI	melibiose	-	builds acid from	from API rID32STR
68381	320055 ChEBI	methyl beta-D-glucopyranoside	-	builds acid from	from API rID32STR
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
68381	27941 ChEBI	pullulan	+	builds acid from	from API rID32STR
68381	16634 ChEBI	raffinose	-	builds acid from	from API rID32STR
68381	30911 ChEBI	sorbitol	-	builds acid from	from API rID32STR
68381	17992 ChEBI	sucrose	+	builds acid from	from API rID32STR
68379	17992 ChEBI	sucrose	+	fermentation	from API Coryne
68381	27082 ChEBI	trehalose	+	builds acid from	from API rID32STR
68381	16199 ChEBI	urea	-	hydrolysis	from API rID32STR
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68381	15688 ChEBI	acetoin		from API rID32STR

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
68381	15688 ChEBI	acetoin	-	from API rID32STR

Enzymes

@ref	Value	Activity	Ec
68381	Alanyl-Phenylalanyl-Proline arylamidase	+		from API rID32STR
68381	alkaline phosphatase	-	3.1.3.1	from API rID32STR
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68381	alpha-galactosidase	+	3.2.1.22	from API rID32STR
68379	alpha-glucosidase	-	3.2.1.20	from API Coryne
68381	arginine dihydrolase	-	3.5.3.6	from API rID32STR
68381	beta-galactosidase	+	3.2.1.23	from API rID32STR
68379	beta-galactosidase	+	3.2.1.23	from API Coryne
68381	beta-glucosidase	-	3.2.1.21	from API rID32STR
68379	beta-glucosidase	-	3.2.1.21	from API Coryne
68381	beta-glucuronidase	-	3.2.1.31	from API rID32STR
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
68381	beta-mannosidase	-	3.2.1.25	from API rID32STR
68379	catalase	-	1.11.1.6	from API Coryne
68379	gelatinase	-		from API Coryne
68381	glycyl tryptophan arylamidase	-		from API rID32STR
68381	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32STR
68379	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API Coryne
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68381	pyrrolidonyl arylamidase	+	3.4.19.3	from API rID32STR
68379	pyrrolidonyl arylamidase	+	3.4.19.3	from API Coryne
68381	urease	-	3.5.1.5	from API rID32STR
68379	urease	-	3.5.1.5	from API Coryne

Fatty acid profile

Metadata FA analysis

@ref

53499

Fatty acid	Percentage	ECL
C18:1 ω9c	22.1	17.769
C16:0	19.8	16
C16:1 ω9c	14.6	15.774
C18:2 ω6,9c/C18:0 ANTE	6.7	17.724
C18:1 ω7c /12t/9t	6.3	17.824
C18:0	6.2	18
C16:1 ω7c/C15:0 ISO 2OH	5.9	15.85
C14:1 ω7c	5.7	13.85
C14:0	4	14
Unidentified	1.5	16.172
unknown 16.580	1.4	16.58
Unidentified	1.3	19.812
C17:1 ω9c ISO	1.2	16.416
C19:1 ISO I	1	18.473
Unidentified	0.8	13.774
C20:2 ω6,9c	0.7	19.735
C12:0	0.7	12

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
53499	-	-	+	+	-	+	-	+	-	-	-	-	+	-	-	-	+	-	+	-	-

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
53499	-	-	+	-	+	-	-	-	-	-	+	-	+	-	-	-	-	+	+	+	-	-	-	-	+	+	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	#Male
#Host Body Product	#Fluids	#Blood
#Infection	#Inflammation	-
#Infection	#Patient	-

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
53499	Human blood,endocarditis,70-yr-old man	1996-11-08	Danderyd	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Phylogenetic group- and species-specific oligonucleotide probes for single-cell detection of lactic acid bacteria in oral biofilms.	Quevedo B, Giertsen E, Zijnge V, Luthi-Schaller H, Guggenheim B, Thurnheer T, Gmur R.	BMC Microbiol	10.1186/1471-2180-11-14	2011

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#53499	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 36937
#68379	Automatically annotated from API Coryne .
#68381	Automatically annotated from API rID32STR .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Abiotrophia defectiva (CCUG 36937)

Name and taxonomic classification