Abiotrophia defectiva (CIP 103892, C4)

Name: Abiotrophia defectiva (CIP 103892, C4)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 135892

Type strain

Strain Designation C4

Culture col. no. CIP 103892 C4

NCBI tax ID(s) 46125

Special Collections CIP

Links

Abiotrophia defectiva C4 is a facultative anaerobe, mesophilic, Gram-positive prokaryote of the family Aerococcaceae.

Gram-positive coccus-shaped facultative anaerobe mesophilic

Name and taxonomic classification

SI-ID 67003

CIP 103892

@ref 20215

Last LPSN update 2025-12-16 10:02:26

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Aerococcaceae

Genus Abiotrophia

Species Abiotrophia defectiva

Full scientific name Abiotrophia defectiva (Bouvet et al. 1989) Kawamura et al. 1995

Synonyms (1)

Streptococcus defectivus

BacDive ID	Other strains from **Abiotrophia defectiva** (37)	Type strain
135184	A. defectiva CIP 103895
135893	A. defectiva PE7, CIP 103893, ATCC 700209
135894	A. defectiva D5, CIP 103894
144952	A. defectiva CCUG 27280 A
145171	A. defectiva CCUG 27805
145172	A. defectiva CCUG 27806
145173	A. defectiva CCUG 27807
145174	A. defectiva CCUG 27808
145313	A. defectiva CCUG 28152
145981	A. defectiva CCUG 30076
146223	A. defectiva CCUG 30642
146761	A. defectiva CCUG 32076
147157	A. defectiva CCUG 32966 B
147409	A. defectiva CCUG 33542
148055	A. defectiva CCUG 34739
148519	A. defectiva CCUG 35584
149144	A. defectiva CCUG 36937
149662	A. defectiva CCUG 38140
149983	A. defectiva CCUG 38793
150007	A. defectiva CCUG 38830
150039	A. defectiva CCUG 38904
150104	A. defectiva CCUG 38998
150280	A. defectiva CCUG 39479
150286	A. defectiva CCUG 39499
150539	A. defectiva CCUG 41537
152179	A. defectiva CCUG 45983
152186	A. defectiva CCUG 46001
152516	A. defectiva CCUG 46990 B
152552	A. defectiva CCUG 47045
152579	A. defectiva CCUG 47112
153374	A. defectiva CCUG 49368
154020	A. defectiva CCUG 52016
154929	A. defectiva CCUG 55745
155280	A. defectiva CCUG 57181
155432	A. defectiva CCUG 57749
155940	A. defectiva CCUG 59700
156779	A. defectiva CCUG 65103

Morphology

Cell morphology

@ref	Gram stain	Cell shape
35153	positive	coccus-shaped

Colony morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Composition	Medium link
35153	MEDIUM 85 - for Abiotrophia		Distilled water make up to (800.000 ml);Columbia agar (39.000 g);Horse blood (100.000 ml);Vitamin B6 solution - M0288 (100.000 ml)
35153	CIP Medium 85			Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
35153	positive	growth	37	mesophilic
35153	positive	growth	30-37	mesophilic
35153	negative	growth	10
35153	negative	growth	45

Physiology and metabolism

Oxygen tolerance

35153

Oxygen tolerancefacultative anaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
35153	NaCl		growth	6.5 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	+	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
35153	17632 ChEBI	nitrate	+	reduction
35153	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	+	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	+	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	Metabolite	Is antibiotic	Is sensitive	Is resistant
35153	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Enzymes

@ref	Value	Activity	Ec
35153	alcohol dehydrogenase	-	1.1.1.1
35153	beta-galactosidase	+	3.2.1.23
35153	catalase	-	1.11.1.6
35153	lysine decarboxylase	-	4.1.1.18
35153	ornithine decarboxylase	-	4.1.1.17
35153	oxidase	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
35153	not determinedn.d.	+	-	-	-	+/-	-	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+	-	-	+/-	+	-	-	-	+	+	-	-	+	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
35153	1	Risk group (French classification)

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#35153	Collection of Institut Pasteur ; Curators of the CIP; CIP 103892
#68371	Automatically annotated from API 50CH acid .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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