Name: Virgibacillus marismortui 123
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 1477

Type strain:

Species: Virgibacillus marismortui

Strain Designation: 123

Culture col. no.: DSM 12325, ATCC 700626, CECT 5066, CIP 105609

Strain history: CIP <- 1998, A. Ventosa, Sevilla Univ., Sevilla, Spain: strain 123

NCBI tax ID(s): 79660 (species)

SI-ID 12957

LMG 18992, ATCC 700626, CECT 5066, CIP 105609, DSM 12325, CCM 4726, NCIMB 13753, KCTC 3845, KCTC 3867, LMG 22268

Special Collections

Section

Virgibacillus marismortui 123 is an obligate aerobe, spore-forming, Gram-positive bacterium that forms circular colonies and was isolated from water samples taken in 1936 by B.E. Volcani, inocula taken from samples in 1993.

colony-forming
Gram-positive
motile
rod-shaped
spore-forming
obligate aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Virgibacillus*
	Species	**Virgibacillus marismortui**
	Full Scientific Name (LPSN)	Virgibacillus marismortui (Arahal et al. 1999) Heyrman et al. 2003

	Synonym	Salibacillus marismortui
	Synonym	Bacillus marismortui

Information on morphological and physiological properties Morphology

[Ref.: #23063]	Gram stain	positive
[Ref.: #120833]	Gram stain	positive

[Ref.: #23063]	Cell length	2.0-3.6 µm

[Ref.: #23063]	Cell width	0.5-0.7 µm

[Ref.: #23063]	Cell shape	rod-shaped
[Ref.: #120833]	Cell shape	rod-shaped

[Ref.: #23063]	Motility	yes
[Ref.: #120833]	Motility	yes

[Ref.: #23063]	Colony color	cream
[Ref.: #23063]	Colony shape	circular

[Ref.: #23063]	Pigment production	yes
[Ref.: #23063]	Pigmentation color	cream

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4692]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #4692]

Culture medium growth

[Ref.: #4692]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4692]

Culture medium composition

expand / minimize

[Ref.: #4692]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #4692]

Culture medium growth

[Ref.: #4692]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4692]

Culture medium composition

expand / minimize

[Ref.: #40245]

Culture medium

Marine agar (MA)

[Ref.: #40245]

Culture medium growth

[Ref.: #40245]

Culture medium composition

expand / minimize

[Ref.: #120833]

Culture medium

CIP Medium 13

[Ref.: #120833]

Culture medium growth

[Ref.: #120833]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #4692]		growth	30 °C
[Ref.: #23063]		growth	15.0-50.0 °C
[Ref.: #23063]		optimum	37.0 °C
[Ref.: #40245]		growth	37 °C
[Ref.: #120833]		growth	22-45 °C
[Ref.: #120833]	no	growth	10 °C
[Ref.: #120833]	no	growth	55 °C

		pH
[Ref.: #23063]	optimum	7.5
[Ref.: #23063]	growth	6.0-9.0
[Ref.: #120833]	growth	6

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23063]	Oxygen tolerance	obligate aerobe
[Ref.: #120833]	Oxygen tolerance	obligate aerobe

[Ref.: #23063]	Spore description	oval,terminal or subterminal,in swollen sporangia
[Ref.: #23063]	Type of spore	endospore
[Ref.: #23063]	Ability of spore formation	yes
[Ref.: #120833]	Ability of spore formation	yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #120833]		NaCl		growth	2-10	%
[Ref.: #120833]		NaCl	no	growth	0	%

[Ref.: #23063]	Murein short key	A31
[Ref.: #23063]	Murein types	A1gamma m-Dpm-direct

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68371]	arbutin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23063]	casein	+	hydrolysis
[Ref.: #68371]	cellobiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23063]	citrate ChEBI	-	carbon source
[Ref.: #120833]	citrate ChEBI	-	carbon source
[Ref.: #23063]	D-arabinose ChEBI	-	builds acid from
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23063]	D-fructose ChEBI	+	builds acid from
[Ref.: #68371]	D-fructose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23063]	D-galactose ChEBI	-	builds acid from
[Ref.: #68371]	D-galactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23063]	D-glucose ChEBI	+	builds acid from
[Ref.: #68371]	D-glucose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23063]	D-mannitol ChEBI	-	builds acid from
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23063]	D-trehalose ChEBI	-	builds acid from
[Ref.: #23063]	D-xylose ChEBI	-	builds acid from
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23063]	dna ChEBI	+	hydrolysis
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #120833]	esculin ChEBI	+	hydrolysis
[Ref.: #68371]	esculin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23063]	gelatin ChEBI	+	hydrolysis
[Ref.: #68371]	gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23063]	glucose ChEBI	+	fermentation
[Ref.: #23063]	glycerol ChEBI	+	builds acid from
[Ref.: #68371]	glycerol ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #120833]	hippurate ChEBI	-	hydrolysis
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23063]	lactose ChEBI	-	builds acid from
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23063]	maltose ChEBI	+	builds acid from
[Ref.: #68371]	maltose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	N-acetylglucosamine ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23063]	nitrate ChEBI	+	reduction
[Ref.: #120833]	nitrate ChEBI	+	reduction
[Ref.: #120833]	nitrate ChEBI	-	respiration
[Ref.: #23063]	nitrite ChEBI	-	reduction
[Ref.: #120833]	nitrite ChEBI	-	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	salicin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23063]	starch ChEBI	-	hydrolysis
[Ref.: #23063]	sucrose ChEBI	-	builds acid from
[Ref.: #68371]	sucrose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	trehalose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23063]	tryptophan ChEBI	-	energy source
[Ref.: #68371]	turanose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23063]	tween 80 ChEBI	-	hydrolysis
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #23063]	chloramphenicol ChEBI	yes
[Ref.: #23063]	erythromycin ChEBI	yes
[Ref.: #23063]	nalidixic acid ChEBI		yes
[Ref.: #23063]	neomycin ChEBI		yes
[Ref.: #23063]	novobiocin ChEBI		yes
[Ref.: #23063]	penicillin g ChEBI	yes
[Ref.: #23063]	rifampicin ChEBI		yes
[Ref.: #23063]	streptomycin ChEBI	yes
[Ref.: #23063]	tetracycline ChEBI	yes

	Metabolite	Production
[Ref.: #23063]	acetoin ChEBI	no
[Ref.: #23063]	hydrogen sulfide ChEBI	no
[Ref.: #23063]	indole ChEBI	no
[Ref.: #120833]	indole ChEBI	no

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test	Citrate test
[Ref.: #23063]	acetoin ChEBI	-
[Ref.: #120833]	acetoin ChEBI	-
[Ref.: #23063]	citrate ChEBI				-
[Ref.: #23063]	glucose ChEBI		+
[Ref.: #120833]	glucose ChEBI		+
[Ref.: #23063]	indole ChEBI			-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #120833]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #120833]	amylase	-
[Ref.: #23063]	arginine dihydrolase	-	3.5.3.6
[Ref.: #120833]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #120833]	caseinase	+	3.4.21.50
[Ref.: #23063]	catalase	+	1.11.1.6
[Ref.: #120833]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #23063]	cytochrome oxidase	+	1.9.3.1
[Ref.: #120833]	DNase	+
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #120833]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #120833]	gelatinase	+
[Ref.: #120833]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #120833]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #120833]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #120833]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #120833]	oxidase	+
[Ref.: #120833]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #23063]	phenylalanine deaminase	-	4.3.1.5
[Ref.: #120833]	protease	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #23063]	tryptophan deaminase	-	4.1.99.1
[Ref.: #120833]	tryptophan deaminase	-
[Ref.: #120833]	tween esterase	-
[Ref.: #23063]	urease	+	3.5.1.5
[Ref.: #120833]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #120833]	10144	not determinedn.d.	+	-	-	-	+	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	-	+	+/-	+	+	+	+	+	-	-	-	+	-	-	-	+/-	+/-	-	-	+	-	-	-	-	-	-	+/-	-	-

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #120833]	1244	not determinedn.d.	+	+	+	+	+	-	-	+	-	+	+	+	-	-	-	+	+	+	+	+	+	+	+	+	-	-	-	-	-	-	-	+	-	+	+	+	-	+	-	-	-	+	-	-	-	-	-	-	-	+	+	-	+	+	+	-	+	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	+	+	-	+	-	-	-	+	+	-	-	-	-	-	+	-	+	-	+	+	+	+	+	-	+	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #120833]	8840	-	+	+	+	-	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4692]	Sample type/isolated from	water samples taken in 1936 by B.E. Volcani, inocula taken from samples in 1993
[Ref.: #4692]	Geographic location (country and/or sea, region)	Dead Sea, Northern basin, close to mouth of Jordan river
[Ref.: #4692]	Country	Jordan
[Ref.: #4692]	Country ISO 3 Code	JOR
[Ref.: #4692]	Continent	Asia

[Ref.: #120833]	Sample type/isolated from	Environment, Water sample
[Ref.: #120833]	Geographic location (country and/or sea, region)	Dead Sea
[Ref.: #120833]	Country	Israel
[Ref.: #120833]	Country ISO 3 Code	ISR
[Ref.: #120833]	Continent	Asia
[Ref.: #120833]	Isolation date	1994

[Ref.: #23063]	Enrichment culture temperature	37.0 ̊C
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	-
#Environmental	#Terrestrial	#Volcanic

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ009793 (>99% sequence identity) for Virgibacillus from Microbeatlas

Aquatic Samples	31
Soil Samples	22
Animal Samples	63
Plant Samples	5
Total Samples	121

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #4692]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120833]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #4692]	Bacillus marismortui strain 123, 16S ribosomal RNA	AJ009793	1563	GenBank ENA	79660 tax ID
[Ref.: #20218]	Virgibacillus marismortui gene for 16S ribosomal RNA, 23S ribosomal RNA, tRNA-Ileu, tRNA-Ala, partial and complete sequence, clone: 900	AB243786	795	GenBank ENA	79660 tax ID	*
[Ref.: #20218]	Virgibacillus marismortui gene for 16S ribosomal RNA, ITS1, 23S ribosomal RNA, partial and complete sequence, clone: 800	AB243787	688	GenBank ENA	79660 tax ID	*
[Ref.: #20218]	Virgibacillus marismortui gene for 16S ribosomal RNA, ITS1, 23S ribosomal RNA, partial and complete sequence, clone: 700	AB243788	688	GenBank ENA	79660 tax ID	*
[Ref.: #20218]	Virgibacillus marismortui isolate Sm2 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	EU723664	643	GenBank ENA	79660 tax ID	*
[Ref.: #20218]	Virgibacillus marismortui isolate Sm51 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	EU723665	750	GenBank ENA	79660 tax ID	*

[Ref.: #23063]

GC-content

40.7 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #4692]

Culture collection no.

DSM 12325, ATCC 700626, CECT 5066, CIP 105609

[Ref.: #71123]

SI-ID 12957

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Virgibacillus xinjiangensis sp. nov., isolated from a Salt Lake of Xin-jiang Province in China.	Jeon CO, Kim JM, Park DJ, Xu LH, Jiang CL, Kim CJ	J Microbiol	10.1007/s12275-009-0107-9	2010	*
Phylogeny	Virgibacillus olivae sp. nov., isolated from waste wash-water from processing of Spanish-style green olives.	Quesada T, Aguilera M, Morillo JA, Ramos-Cormenzana A, Monteoliva-Sanchez M	Int J Syst Evol Microbiol	10.1099/ijs.0.64550-0	2007	*
Phylogeny	Bacillus marismortui sp. nov., a new moderately halophilic species from the Dead Sea.	Arahal DR, Marquez MC, Volcani BE, Schleifer KH, Ventosa A	Int J Syst Bacteriol	10.1099/00207713-49-2-521	1999	*

References

#4692

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 12325

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#23063

David R. Arahal,M. Carmen Márquez,Benjamin E. Volcani,Karl H. Schleifer,Antonio Ventosa: Bacillus marismortui sp. nov., a new moderately halophilic species from the Dead Sea. IJSEM 49: 521 - 530 1999 ( DOI 10.1099/00207713-49-2-521 , PubMed 10319473 )

#40245 ; Curators of the CIP;

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#71123

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID12957.1 )

#120833 Collection of Institut Pasteur ; Curators of the CIP; CIP 105609
* These data were automatically processed and therefore are not curated

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