Name: Staphylococcus simiae DSM 17639
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 14668

Type strain:

Species: Staphylococcus simiae

Culture col. no.: DSM 17639, CCM 7230, NRL CEM 04/479, CCUG 51258

Strain history: <- CCM <- D. Koukalova, Olomouc 28-2/Zoo

NCBI tax ID(s): 308354 (species)

SI-ID 139330

CCM 7230, DSM 17639, CCUG 51258

Other strains from Staphylococcus simiae

S. simiae CCUG 51256, DSM 17636, CCM 7213, ... (type strain)
S. simiae DSM 17637, CCM 7214, LMG 22724
S. simiae DSM 17638, CCM 7229, NRL CEM 04/471
S. simiae CCUG 51257, CCM 7216

Section

Staphylococcus simiae DSM 17639 is an aerobe, mesophilic animal pathogen that was isolated from rectal swab, South American squirrel monkey.

aerobe
animal pathogen
mesophilic
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Staphylococcaceae*
	Genus	*Staphylococcus*
	Species	**Staphylococcus simiae**
	Full Scientific Name (LPSN)	Staphylococcus simiae Pant??ek et al. 2005

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7103]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #7103]

Culture medium growth

[Ref.: #7103]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7103]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #7103]			growth	37 °C
[Ref.: #59119]			growth	37 °C

[Ref.: #7103]	Temperature range	mesophilic
[Ref.: #59119]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #59119]

Oxygen tolerance

aerobe

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68375]	arabinose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68378]	arginine ChEBI	+	hydrolysis	* from API STA
[Ref.: #68375]	arginine ChEBI	-	hydrolysis	* from API ID32STA
[Ref.: #68375]	cellobiose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68378]	D-fructose ChEBI	+	builds acid from	* from API STA
[Ref.: #68375]	D-fructose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68379]	D-glucose ChEBI	+	fermentation	* from API Coryne, API ID32STA
[Ref.: #68378]	D-glucose ChEBI	-	builds acid from	* from API STA
[Ref.: #68378]	D-mannitol ChEBI	+	builds acid from	* from API STA
[Ref.: #68379]	D-mannitol ChEBI	+	fermentation	* from API Coryne, API ID32STA
[Ref.: #68378]	D-mannose ChEBI	+	builds acid from	* from API STA
[Ref.: #68375]	D-mannose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne, API ID32STA
[Ref.: #68379]	D-xylose ChEBI	+	fermentation	* from API Coryne
[Ref.: #68378]	D-xylose ChEBI	-	builds acid from	* from API STA
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #68375]	esculin ChEBI	-	hydrolysis	* from API ID32STA
[Ref.: #68379]	gelatin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #68378]	lactose ChEBI	+	builds acid from	* from API STA
[Ref.: #68379]	lactose ChEBI	+	fermentation	* from API Coryne, API ID32STA
[Ref.: #68378]	maltose ChEBI	+	builds acid from	* from API STA
[Ref.: #68379]	maltose ChEBI	+	fermentation	* from API Coryne, API ID32STA
[Ref.: #68378]	melibiose ChEBI	-	builds acid from	* from API STA
[Ref.: #68378]	methyl alpha-D-glucopyranoside ChEBI	+	builds acid from	* from API STA
[Ref.: #68375]	N-acetylglucosamine ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68378]	N-acetylglucosamine ChEBI	-	builds acid from	* from API STA
[Ref.: #68379]	nitrate ChEBI	+	reduction	* from API Coryne, API ID32STA
[Ref.: #68378]	nitrate ChEBI	-	reduction	* from API STA
[Ref.: #68375]	ornithine ChEBI	-	degradation	* from API ID32STA
[Ref.: #68378]	raffinose ChEBI	+	builds acid from	* from API STA
[Ref.: #68375]	raffinose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68378]	sucrose ChEBI	+	builds acid from	* from API STA
[Ref.: #68379]	sucrose ChEBI	+	fermentation	* from API Coryne, API ID32STA
[Ref.: #68378]	trehalose ChEBI	+	builds acid from	* from API STA
[Ref.: #68375]	trehalose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68375]	turanose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68379]	urea ChEBI	+	hydrolysis	* from API Coryne, API ID32STA
[Ref.: #68378]	urea ChEBI	-	hydrolysis	* from API STA
[Ref.: #68378]	xylitol ChEBI	+	builds acid from	* from API STA
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic resistance
[Ref.: #68378]		lysostaphin	yes	* from API STA

	Metabolite production	Metabolite	Production
[Ref.: #68378]		acetoin ChEBI	yes	* from API STA, API ID32STA

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #68378]		acetoin ChEBI	+	* from API STA
[Ref.: #68375]		acetoin ChEBI	-	* from API ID32STA

	Enzyme	Enzyme activity	EC number
[Ref.: #68378]	alkaline phosphatase	+	3.1.3.1	* from API STA, API ID32STA, API Coryne
[Ref.: #68379]	alpha-glucosidase	-	3.2.1.20	* from API Coryne
[Ref.: #68378]	arginine dihydrolase	+	3.5.3.6	* from API STA
[Ref.: #68375]	arginine dihydrolase	-	3.5.3.6	* from API ID32STA
[Ref.: #68375]	beta-galactosidase	+	3.2.1.23	* from API ID32STA, API Coryne
[Ref.: #68379]	beta-glucosidase	+	3.2.1.21	* from API Coryne
[Ref.: #68375]	beta-glucosidase	-	3.2.1.21	* from API ID32STA
[Ref.: #68375]	beta-glucuronidase	-	3.2.1.31	* from API ID32STA, API Coryne
[Ref.: #68379]	catalase	+	1.11.1.6	* from API Coryne
[Ref.: #68379]	gelatinase	-		* from API Coryne
[Ref.: #68375]	L-arginine arylamidase	-		* from API ID32STA
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API Coryne
[Ref.: #68375]	ornithine decarboxylase	-	4.1.1.17	* from API ID32STA
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68375]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API ID32STA, API Coryne
[Ref.: #68375]	urease	+	3.5.1.5	* from API ID32STA, API Coryne
[Ref.: #68378]	urease	-	3.5.1.5	* from API STA
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #59119]

Fatty acid	Percentage	ECL
C15:0 ANTEISO	46.9	14.711
C17:0 anteiso	21.3	16.722
C18:0	6.2	18
C17:0 iso	4	16.629
C15:0 ISO	3.9	14.621
C19:0 ANTEISO	3.6	18.729
C16:0 iso	2.8	15.626
C14:0 ISO	2.4	13.618
C20:0	2.3	20
C16:0	1.8	16
C18:0 ISO	1.7	17.632
C18:2 ω6,9c/C18:0 ANTE	1.2	17.724
C19:0 ISO	0.8	18.633
C18:1 ω9c	0.7	17.769
C19:0	0.4	19

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #59119]	3071	+	-	-	+	-	+	-	-	+	+	-	-	+	-	+	+	+	+	+	-	+

API® ID32STA:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	Ornithine decarboxylaseODC	Esculin hydrolysisESC	Fermentation of D-glucoseGLU	Fermentation of D-fructoseFRU	Fermentation of D-mannoseMNE	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of trehaloseTRE	Fermentation of D-mannitolMAN	Fermentation of raffinoseRAF	Fermentation of D-riboseRIB	Fermentation of cellobioseCEL	Reduction of nitrateNIT	Acetoin production (Voges Proskauer test)VP	beta-Galactosidasebeta GAL	L-arginine arylamidaseArgA	Alkaline phosphatasePAL	Pyrrolidonyl arylamidasePyrA	Novobiocin resistanceNOVO	Fermentation of sucroseSAC	Fermentation of N-acetyl-glucosamineNAG	Fermentation of turanoseTUR	Fermentation of arabinoseARA	beta-Glucuronidasebeta GUR
[Ref.: #7103]	5894	+	-	-	-	+	+	-	+	+	+	+	-	-	-	+	-	+	-	+	-	+/-	+	+	+	-	-
[Ref.: #59119]	2334	+	-	-	-	+	+	-	+	+	+	+	-	-	-	+	-	+	-	+	-	-	+	+	+	-	-

API® STA:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from maltoseMAL	Acid from lactoseLAC	Acid from trehaloseTRE	Acid from D-mannitolMAN	Acid from xylitolXLT	Acid from melibioseMEL	Reduction of nitrateNIT	Alkaline phosphatasePAL	Acetoin production (Voges Proskauer test)VP	Acid from raffinoseRAF	Acid from D-xyloseXYL	Acid from sucroseSAC	Acid from methyl-alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Arginine dihydrolaseADH	Urease/urea hydrolysisURE	Resistance to lysostaphin (EC 3.4.24.75)LSTR
[Ref.: #59119]	141	not determinedn.d.	-	+	+	+	+	+	+	+	-	-	+	+	+	-	+	+	-	+	-	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7103]	Sample type/isolated from	rectal swab, South American squirrel monkey
[Ref.: #7103]	Geographic location (country and/or sea, region)	Olomouc, Zoological Garden
[Ref.: #7103]	Country	Czech Republic
[Ref.: #7103]	Country ISO 3 Code	CZE
[Ref.: #7103]	Continent	Europe

[Ref.: #59119]	Sample type/isolated from	Monkey feces,South American squirrel monkey
[Ref.: #59119]	Sampling date	2004
[Ref.: #59119]	Geographic location (country and/or sea, region)	Olomouc,Zoological Garden
[Ref.: #59119]	Country	Czech Republic
[Ref.: #59119]	Country ISO 3 Code	CZE
[Ref.: #59119]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Infection	#Patient	#Swab
#Host	#Mammals	#Primates
#Host Body-Site	#Gastrointestinal tract	#Rectum

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7103]	Pathogenicity (animal)	yes
[Ref.: #7103]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

[Ref.: #7103]

GC-content

33.8 mol%

Availability in culture collections External links

[Ref.: #7103]

Culture collection no.

DSM 17639, CCM 7230, NRL CEM 04/479, CCUG 51258

[Ref.: #83794]

SI-ID 139330

References

#7103

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17639

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#59119 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 51258

#68375

Automatically annotated from API ID32STA .

#68378

Automatically annotated from API STA .

#68379

Automatically annotated from API Coryne .

#83794

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID139330.1 )

* These data were automatically processed and therefore are not curated

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