Actinotignum urinale (KCTC 15231, DSM 15805, CCUG 46093)

Name: Actinotignum urinale (KCTC 15231, DSM 15805, CCUG 46093)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 146

Type strain

Strain Designation R9242

Culture col. no. KCTC 15231 DSM 15805 CCUG 46093 CIP 107424 R9242

NCBI tax ID(s) 1120933 190146

Special Collections DSMZ CCUG KCTC CIP Literature strains

History DSMZ <- CCUG <- V. Hall KCTC <- CCUG <- V Hall CIP <- 2002, CCUG <- Hall, PHLS, Cardiff, UK: strain R9242

Links

Actinotignum urinale R9242 is an anaerobe, rod-shaped bacterium that was isolated from urine culture, human female with pyuria.

rod-shaped anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 23014

KCTC 15231,CCUG 46093,CIP 107424,DSM 15805

@ref 20215

Last LPSN update 2026-05-29 08:24:57

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Actinomycetales

Family Actinomycetaceae

Genus Actinotignum

Species Actinotignum urinale

Full scientific name Actinotignum urinale (Hall et al. 2003) Yassin et al. 2015

Synonyms (1)

Actinobaculum urinale

BacDive ID	Other strains from **Actinotignum urinale** (4)	Type strain
153154	A. urinale CCUG 48594 B
156367	A. urinale CCUG 61308
156423	A. urinale CCUG 61679
156484	A. urinale CCUG 61991

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
67771		rod-shaped
67771		curved-shaped
67771	positive
123752	positive	rod-shaped
125438			93
125439			95.306

Colony morphology

123752

Hemolysis ability0

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
6115	PYG MEDIUM (MODIFIED) (DSMZ Medium 104)	Medium recipe at MediaDive	Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water
33058	MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and Neisseria		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml);PolyVitex mischung (10.000 ml)
123752	CIP Medium 10	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
6115	positive	growth	37
33058	positive	growth	37
57056	positive	growth	37
67771	positive	growth	37
123752	positive	growth	30-41
123752	negative	growth	10
123752	negative	growth	25
123752	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
6115	anaerobe
57056	anaerobe
67771	anaerobe
123752	anaerobe

Spore formation

@ref	Spore formation	Confidence
67771
125438		92.65
125439		96.493

Halophily

@ref	Salt	Growth	Tested relation	Concentration
123752	NaCl	positive	growth	0 %
123752	NaCl		growth	2 %
123752	NaCl		growth	4 %
123752	NaCl		growth	6 %
123752	NaCl		growth	8 %
123752	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	29016 ChEBI	arginine	-	hydrolysis	from API rID32A
123752	16947 ChEBI	citrate	-	carbon source
23354	17634 ChEBI	D-glucose	+	builds acid from
68380	16024 ChEBI	D-mannose	+	fermentation	from API rID32A
23354	16988 ChEBI	D-ribose	+	builds acid from
23354	65327 ChEBI	D-xylose	-	builds acid from
23354	4853 ChEBI	esculin	-	hydrolysis
123752	4853 ChEBI	esculin	-	hydrolysis
23354	5291 ChEBI	gelatin	-	hydrolysis
23354	28087 ChEBI	glycogen	-	builds acid from
23354	606565 ChEBI	hippurate	+	hydrolysis
123752	606565 ChEBI	hippurate	+	hydrolysis
23354	15443 ChEBI	inulin	-	builds acid from
23354	30849 ChEBI	L-arabinose	-	builds acid from
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
23354	17716 ChEBI	lactose	-	builds acid from
23354	17306 ChEBI	maltose	-	builds acid from
23354	29864 ChEBI	mannitol	-	builds acid from
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
123752	17632 ChEBI	nitrate	-	reduction
123752	17632 ChEBI	nitrate	+	respiration
123752	16301 ChEBI	nitrite	-	reduction
23354	16634 ChEBI	raffinose	-	builds acid from
68380	16634 ChEBI	raffinose	+	fermentation	from API rID32A
23354	30911 ChEBI	sorbitol	-	builds acid from
23354	28017 ChEBI	starch	-	builds acid from
23354	17992 ChEBI	sucrose	-	builds acid from
23354	27082 ChEBI	trehalose	-	builds acid from
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	+	hydrolysis	from API rID32A

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
123752	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A
123752	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test	Voges-proskauer-test	Methylred-test
123752	15688 ChEBI	acetoin		-
123752	17234 ChEBI	glucose			-
68380	35581 ChEBI	indole	-			from API rID32A

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
68380	alanine arylamidase	-	3.4.11.2	from API rID32A
123752	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68380	alkaline phosphatase	-	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
23354	alpha-chymotrypsin	-	3.4.21.1
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
23354	alpha-fucosidase	-	3.2.1.51
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
23354	alpha-galactosidase	-	3.2.1.22
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68380	alpha-glucosidase	-	3.2.1.20	from API rID32A
68382	alpha-mannosidase	-	3.2.1.24	from API zym
23354	arginine dihydrolase	-	3.5.3.6
68380	arginine dihydrolase	-	3.5.3.6	from API rID32A
23354	beta-galactosidase	-	3.2.1.23
68382	beta-galactosidase	-	3.2.1.23	from API zym
123752	beta-galactosidase	-	3.2.1.23
68380	beta-galactosidase	-	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68382	beta-glucosidase	-	3.2.1.21	from API zym
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
68382	beta-glucuronidase	+	3.2.1.31	from API zym
68380	beta-glucuronidase	+	3.2.1.31	from API rID32A
23354	catalase	-	1.11.1.6
123752	catalase	+	1.11.1.6
23354	cystine arylamidase	-	3.4.11.3
68382	cystine arylamidase	-	3.4.11.3	from API zym
23354	cytochrome oxidase	-	1.9.3.1
23354	esterase (C 4)	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	-		from API zym
123752	gamma-glutamyltransferase	-	2.3.2.2
123752	gelatinase	-
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	-		from API rID32A
68380	histidine arylamidase	-		from API rID32A
68380	L-arginine arylamidase	-		from API rID32A
68382	leucine arylamidase	-	3.4.11.1	from API zym
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	-	3.4.11.1	from API rID32A
23354	lipase (C 14)	-
68382	lipase (C 14)	-		from API zym
123752	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
123752	ornithine decarboxylase	-	4.1.1.17
123752	oxidase	-
68380	phenylalanine arylamidase	-		from API rID32A
68380	proline-arylamidase	+	3.4.11.5	from API rID32A
23354	pyrazinamidase	-	3.5.1.B15
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
23354	trypsin	-	3.4.21.4
68382	trypsin	-	3.4.21.4	from API zym
123752	tryptophan deaminase	+
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	-		from API rID32A
123752	urease	+	3.5.1.5
68380	urease	+	3.5.1.5	from API rID32A
23354	valine arylamidase	-
68382	valine arylamidase	-		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	ppGpp biosynthesis	100	4 of 4
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	folate polyglutamylation	100	1 of 1
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	formaldehyde oxidation	100	3 of 3
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	L-lactaldehyde degradation	100	3 of 3
66794	valine metabolism	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	ketogluconate metabolism	87.5	7 of 8
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	peptidoglycan biosynthesis	86.67	13 of 15
66794	glycolate and glyoxylate degradation	83.33	5 of 6
66794	threonine metabolism	80	8 of 10
66794	lipoate biosynthesis	80	4 of 5
66794	palmitate biosynthesis	77.27	17 of 22
66794	acetate fermentation	75	3 of 4
66794	sulfopterin metabolism	75	3 of 4
66794	gluconeogenesis	75	6 of 8
66794	photosynthesis	71.43	10 of 14
66794	starch degradation	70	7 of 10
66794	phenylalanine metabolism	69.23	9 of 13
66794	serine metabolism	66.67	6 of 9
66794	NAD metabolism	66.67	12 of 18
66794	acetoin degradation	66.67	2 of 3
66794	pentose phosphate pathway	63.64	7 of 11
66794	isoleucine metabolism	62.5	5 of 8
66794	dTDPLrhamnose biosynthesis	62.5	5 of 8
66794	degradation of sugar alcohols	62.5	10 of 16
66794	vitamin B1 metabolism	61.54	8 of 13
66794	leucine metabolism	61.54	8 of 13
66794	metabolism of amino sugars and derivatives	60	3 of 5
66794	glycogen metabolism	60	3 of 5
66794	degradation of sugar acids	60	15 of 25
66794	Entner Doudoroff pathway	60	6 of 10
66794	glycolysis	58.82	10 of 17
66794	ubiquinone biosynthesis	57.14	4 of 7
66794	purine metabolism	56.38	53 of 94
66794	d-mannose degradation	55.56	5 of 9
66794	aspartate and asparagine metabolism	55.56	5 of 9
66794	metabolism of disaccharids	54.55	6 of 11
66794	methionine metabolism	53.85	14 of 26
66794	urea cycle	53.85	7 of 13
66794	oxidative phosphorylation	52.75	48 of 91
66794	pyrimidine metabolism	51.11	23 of 45
66794	ethanol fermentation	50	1 of 2
66794	tryptophan metabolism	50	19 of 38
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	glycogen biosynthesis	50	2 of 4
66794	suberin monomers biosynthesis	50	1 of 2
66794	coenzyme A metabolism	50	2 of 4
66794	cis-vaccenate biosynthesis	50	1 of 2
66794	adipate degradation	50	1 of 2
66794	tetrahydrofolate metabolism	50	7 of 14
66794	butanoate fermentation	50	2 of 4
66794	alanine metabolism	48.28	14 of 29
66794	glutamate and glutamine metabolism	46.43	13 of 28
66794	degradation of pentoses	46.43	13 of 28
66794	d-xylose degradation	45.45	5 of 11
66794	proline metabolism	45.45	5 of 11
66794	CO2 fixation in Crenarchaeota	44.44	4 of 9
66794	cysteine metabolism	44.44	8 of 18
66794	reductive acetyl coenzyme A pathway	42.86	3 of 7
66794	cardiolipin biosynthesis	42.86	3 of 7
66794	propanol degradation	42.86	3 of 7
66794	mevalonate metabolism	42.86	3 of 7
66794	glutathione metabolism	42.86	6 of 14
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	4-hydroxyphenylacetate degradation	40	4 of 10
66794	glycine metabolism	40	4 of 10
66794	D-cycloserine biosynthesis	40	2 of 5
66794	non-pathway related	39.47	15 of 38
66794	lipid metabolism	38.71	12 of 31
66794	isoprenoid biosynthesis	38.46	10 of 26
66794	lysine metabolism	38.1	16 of 42
66794	arginine metabolism	37.5	9 of 24
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	37.5	3 of 8
66794	tyrosine metabolism	35.71	5 of 14
66794	histidine metabolism	34.48	10 of 29
66794	lipid A biosynthesis	33.33	3 of 9
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	octane oxidation	33.33	1 of 3
66794	flavin biosynthesis	33.33	5 of 15
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	IAA biosynthesis	33.33	1 of 3
66794	degradation of hexoses	33.33	6 of 18
66794	myo-inositol biosynthesis	30	3 of 10
66794	citric acid cycle	28.57	4 of 14
66794	vitamin B6 metabolism	27.27	3 of 11
66794	ascorbate metabolism	27.27	6 of 22
66794	cyclohexanol degradation	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	lactate fermentation	25	1 of 4
66794	CMP-KDO biosynthesis	25	1 of 4
66794	sulfate reduction	23.08	3 of 13
66794	nitrate assimilation	22.22	2 of 9
66794	allantoin degradation	22.22	2 of 9
66794	molybdenum cofactor biosynthesis	22.22	2 of 9
66794	heme metabolism	21.43	3 of 14

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
123752	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
6115	+	-	-	-	-	-	-	-	+	-	+	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Disease	-
#Infection	#Patient	-
#Host	#Human	-
#Host Body Product	#Fluids	#Urine
#Host	#Human	#Female

Isolation

@ref	Sample type	Host species	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
6115	urine culture, human female with pyuria	Homo sapiens		Worthing, West Sussex	United Kingdom	GBR	Europe
57056	Human urine,female	Homo sapiens	1995	Worthing	United Kingdom	GBR	Europe
67771	From urine culture, human female with pyuria	Homo sapiens		West Sussex, Worthing	United Kingdom	GBR	Europe
123752	Human, Urine	Homo sapiens		Cardiff	United Kingdom	GBR	Europe

Taxonmaps

69479

Global distribution of 16S sequence NR_028978 (>99% sequence identity) for Actinotignum urinale subclade from Microbeatlas

Aquatic Samples	368
Soil Samples	159
Animal Samples	1702
Plant Samples	53
Total Samples	2282

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6115	2	Risk group (German classification) According to TRBA 466
123752	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67771	ASM42044v1 assembly for Actinotignum urinale DSM 15805	scaffold	GCA_000420445	1120933.3	2524614758	1120933	71.59

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
6115	Actinobaculum urinalis 16S rRNA gene, strain CCUG 46093T	AJ439453	1488		190146
67771	Actinotignum urinale strain R9242 16S ribosomal RNA, partial sequence	NR_028978	1488		190146

GC content

@ref	GC-content (mol%)	Method
23354	50.0	Thermal denaturation, fluorometry
6115	50	high performance liquid chromatography (HPLC)
67771	50.0	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM42044v1 assembly for Actinotignum urinale DSM 15805
NCBI: GCA_000420445

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate anaerobe	66.89	no
125439	gram_stain	BacteriaNetⓘ	positive	62.23	no
125439	motility	BacteriaNetⓘ	no	95.31	no
125439	spore_formation	BacteriaNetⓘ	no	96.49	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Actinobaculum urinale DSM 15805
PATRIC: 1120933.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.41	yes
125438	anaerobic	anaerobicⓘ	yes	53.75	yes
125438	spore-forming	spore-formingⓘ	no	92.65	yes
125438	aerobic	aerobicⓘ	no	85.43	yes
125438	thermophilic	thermophileⓘ	no	94.33	yes
125438	flagellated	motile2+ⓘ	no	93.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Ancrocorticia populi gen. nov., sp. nov, isolated from the symptomatic bark of Populus × euramericana canker.	Xu GT, Xue H, Piao CG, Guo MW, Li Y.	Microbiologyopen	10.1002/mbo3.792	2019
Genetics	Noncontiguous finished genome sequences and descriptions of Actinomyces ihuae, Actinomyces bouchesdurhonensis, Actinomyces urinae, Actinomyces marseillensis, Actinomyces mediterranea and Actinomyces oralis sp. nov. identified by culturomics.	Mbogning Fonkou MD, Mailhe M, Ndongo S, Ricaboni D, Morand A, Cornu F, Tidjani Alou M, Bilen M, Andrieu C, Levasseur A, Cadoret F, Raoult D.	New Microbes New Infect	10.1016/j.nmni.2018.06.004	2018
Phylogeny	Dissection of the genus Actinobaculum: Reclassification of Actinobaculum schaalii Lawson et al. 1997 and Actinobaculum urinale Hall et al. 2003 as Actinotignum schaalii gen. nov., comb. nov. and Actinotignum urinale comb. nov., description of Actinotignum sanguinis sp. nov. and emended descriptions of the genus Actinobaculum and Actinobaculum suis; and re-examination of the culture deposited as Actinobaculum massiliense CCUG 47753T ( = DSM 19118T), revealing that it does not represent a strain of this species.	Yassin AF, Sproer C, Pukall R, Sylvester M, Siering C, Schumann P	Int J Syst Evol Microbiol	10.1099/ijs.0.069294-0	2014
Phylogeny	Actinobaculum urinale sp. nov., from human urine.	Hall V, Collins MD, Hutson RA, Falsen E, Inganas E, Duerden BI	Int J Syst Evol Microbiol	10.1099/ijs.0.02422-0	2003

References

#6115	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15805
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#23354	A. F. Yassin, C. Spröer, R. Pukall, M. Sylvester, C. Siering, P. Schumann: Dissection of the genus Actinobaculum: Reclassification of Actinobaculum schaalii Lawson et al. 1997 and Actinobaculum urinale Hall et al. 2003 as Actinotignum schaalii gen. nov., comb. nov. and Actinotignum urinale comb. nov., description of Actinotignum sanguinis sp. nov. and emended descriptions of the genus Actinobaculum and Actinobaculum suis; and re-examination of the culture deposited as Actinobaculum massiliense CCUG 47753T (=DSM 19118T), revealing that it does not represent a strain of this species. IJSEM 65: 615 - 624 2015 ( DOI 10.1099/ijs.0.069294-0 , PubMed 25406238 )
#33058	; Curators of the CIP;
#57056	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 46093
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#68380	Automatically annotated from API rID32A .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#123752	Collection of Institut Pasteur ; Curators of the CIP; CIP 107424
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Actinotignum urinale (KCTC 15231, DSM 15805, CCUG 46093)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

Pathway annotation

API zym

API rID32A

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000420445

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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