Name: Pullulanibacillus naganoensis D 39
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 14407

Type strain:

Species: Pullulanibacillus naganoensis

Strain Designation: D 39

Culture col. no.: DSM 10191, ACM 5005, ATCC 53909, LMG 12887

Strain history: <- L. Sly, ACM

NCBI tax ID(s): 52763 (species)

SI-ID 7355

LMG 12887, ACM 5005, ATCC 53909, DSM 10191, KCTC 3742, ATCC 5005, NRRL B-23386

Special Collections

DSMZ

Other strains from Pullulanibacillus naganoensis

Section

Pullulanibacillus naganoensis D 39 is a bacterium that was isolated from soil.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Sporolactobacillaceae*
	Genus	*Pullulanibacillus*
	Species	**Pullulanibacillus naganoensis**
	Full Scientific Name (LPSN)	Pullulanibacillus naganoensis (Tomimura et al. 1990) Hatayama et al. 2006

Synonym

Bacillus naganoensis

Information on culture and growth conditions Culture and growth conditions

[Ref.: #3842]

Culture medium

ALICYCLOBACILLUS MEDIUM (DSMZ Medium 402)

[Ref.: #3842]

Culture medium growth

[Ref.: #3842]

Culture medium link

Medium recipe at MediaDive

[Ref.: #3842]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #3842]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #3842]

Name of produced compound

pullulanase

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #3842]	Sample type/isolated from	soil
[Ref.: #3842]	Geographic location (country and/or sea, region)	Nagano prefecture, Kiso district
[Ref.: #3842]	Country	Japan
[Ref.: #3842]	Country ISO 3 Code	JPN
[Ref.: #3842]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB021193 (>99% sequence identity) for Pullulanibacillus naganoensis from Microbeatlas

Aquatic Samples	10
Soil Samples	290
Animal Samples	5
Plant Samples	1
Total Samples	306

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #3842]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Bacillus naganoensis gene for 16S ribosomal RNA	AB021193	1540	GenBank ENA	52763 tax ID	*
[Ref.: #20218]	Bacillus naganoensis genes for 16S rRNA, ITS1, 23S rRNA, partial and complete sequence, strain: DSM 10191	AB231790	443	GenBank ENA	52763 tax ID	*
[Ref.: #20218]	Bacillus naganoensis genes for 16S rRNA, ITS2, 23S rRNA, partial and complete sequence, strain: DSM 10191	AB231791	379	GenBank ENA	52763 tax ID	*

[Ref.: #3842]

GC-content

45 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #3842]

Culture collection no.

DSM 10191, ACM 5005, ATCC 53909, LMG 12887

[Ref.: #83551]

SI-ID 7355

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Scopulibacillus cellulosilyticus sp. nov., a cellulose-degrading bacterium isolated from tea.	Yan ZF, Lin P, Li CT, Kook M, Yi TH	Antonie Van Leeuwenhoek	10.1007/s10482-018-1101-1	2018	*
Phylogeny	Scopulibacillus daqui sp. nov., a thermophilic bacterium isolated from high temperature daqu.	Yao S, Zhai L, Xin C, Liu Y, Xu L, Zhang X, Zhao T, Zhang L, Cheng C	Int J Syst Evol Microbiol	10.1099/ijsem.0.001417	2016	*
Phylogeny	Terrilactibacillus laevilacticus gen. nov., sp. nov., isolated from soil.	Prasirtsak B, Thongchul N, Tolieng V, Tanasupawat S	Int J Syst Evol Microbiol	10.1099/ijsem.0.000954	2016	*
Phylogeny	Pullulanibacillus pueri sp. nov., isolated from Pu'er tea.	Niu L, Tang T, Song L, Xiong M, Tian J, Zhang K, Hu X, Zhu D	Int J Syst Evol Microbiol	10.1099/ijs.0.000239	2015	*
Phylogeny	Pullulanibacillus uraniitolerans sp. nov., an acidophilic, U(VI)-resistant species isolated from an acid uranium mill tailing effluent and emended description of the genus Pullulanibacillus.	Pereira SG, Albuquerque L, Nobre MF, Tiago I, Verissimo A, Pereira A, da Costa MS	Int J Syst Evol Microbiol	10.1099/ijs.0.040923-0	2012	*
Enzymology	Description of Bacillus naganoensis sp. nov.	Tomimura E, Zeman NW, Frankiewicz JR, Teague WM	Int J Syst Bacteriol	10.1099/00207713-40-2-123	1990	*

References

#3842

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 10191

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#83551

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID7355.1 )

* These data were automatically processed and therefore are not curated

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