Alcaligenes faecalis (CCUG 2350, ATCC 19209, NCTC 10388)

Name: Alcaligenes faecalis (CCUG 2350, ATCC 19209, NCTC 10388)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 141490

Type strain

Culture col. no. CCUG 2350 ATCC 19209 NCTC 10388 IAM 12372 JCM 20525

NCBI tax ID(s) 511

Special Collections CCUG JCM

History JCM <-- IAM 12372 <-- ATCC 19209 ("Alcaligenes odorans subsp. viridans") <-- NCTC 10388 <-- R. G. Mitchell.

Links

Alcaligenes faecalis CCUG 2350 is a bacterium that was isolated from Human wound.

genome sequence Bacteria

Name and taxonomic classification

SI-ID 757

LMG 3394,ATCC 19209,CCUG 2350,NCTC 10388,IAM 12372,JCM 20525

@ref 20215

Last LPSN update 2026-05-29 08:39:58

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Alcaligenaceae

Genus Alcaligenes

Species Alcaligenes faecalis

Full scientific name Alcaligenes faecalis Castellani and Chalmers 1919 (Approved Lists 1980)

BacDive ID	Other strains from **Alcaligenes faecalis** (52)	Type strain
326	A. faecalis MT1, DSM 16964
328	A. faecalis CCUG 710, LMG 1230, DSM 30033, ATCC 15554, ...
336	A. faecalis DSM 13644, IMI 358536
136750	A. faecalis CIP 64.15, NBIMCC 156, JCM 20667, IAM 12590, ...
136759	A. faecalis 439, CIP 62.32, ATCC 19018, NBIMCC 154, NCTC ...
136760	A. faecalis Lister, CCUG 535, LMG 3340, LMG 7046, CIP ...
136761	A. faecalis Krier 2, CIP 67.23, JCM 20664, IAM 12587, ...
136762	A. faecalis N28, CIP 71.10, CCEB 569
136763	A. faecalis N46, CIP 71.9, CCEB 568
136764	A. faecalis 44-86, 3242, CIP 102140
136805	A. faecalis Ch.mt.2, CIP 71.7, CCEB 015
141201	A. faecalis CCUG 171 A
141238	A. faecalis CCUG 362
141240	A. faecalis CCUG 365
141243	A. faecalis CCUG 368
141281	A. faecalis CCUG 575 B
141282	A. faecalis CCUG 585
141383	A. faecalis CCUG 1325
141425	A. faecalis CCUG 1712
141464	A. faecalis CCUG 2071
141466	A. faecalis CCUG 2074
141512	A. faecalis CCUG 2493
141515	A. faecalis CCUG 2515, NRRL B-170
141698	A. faecalis CCUG 4978, CCM 267
142157	A. faecalis CCUG 11246
142401	A. faecalis CCUG 12360
142499	A. faecalis CCUG 12699
143557	A. faecalis CCUG 20077
144618	A. faecalis CCUG 25969
146205	A. faecalis CCUG 30599
148153	A. faecalis CCUG 34908
149989	A. faecalis CCUG 38807
151250	A. faecalis CCUG 43542
151946	A. faecalis CCUG 45299
152215	A. faecalis CCUG 46123
153566	A. faecalis CCUG 50196
154446	A. faecalis CCUG 53652
157300	A. faecalis IMI 347326
157301	A. faecalis IMI 347327
157302	A. faecalis IMI 349009
162800	A. faecalis JCM 20175, IAM 1473
162981	A. faecalis JCM 20666, IAM 12589
174956	A. faecalis Dres_AlcFaec_07, DSM 107044
174957	A. faecalis Dres_AlcFaec_08, DSM 107045
174958	A. faecalis Dres_AlcFaec_02, DSM 107046
174959	A. faecalis DSM 108051
174960	A. faecalis Dres_AlcFaec_11, DSM 108181
174961	A. faecalis Dres_AlcFaec_12, DSM 108182
174962	A. faecalis DSM 108185
174963	A. faecalis Dres_AlcFaec_14, DSM 110696
174964	A. faecalis Dres_AlcFaec_15, DSM 117146
177899	A. faecalis 840, SF002785

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	96.729
125439	negative	96.66

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	97.053

Spore formation

@ref	Spore formation	Confidence
125439		90.516

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68374	29016 ChEBI	arginine	-	hydrolysis	from API ID32E
68374	17057 ChEBI	cellobiose	-	builds acid from	from API ID32E
68374	18333 ChEBI	D-arabitol	-	builds acid from	from API ID32E
68374	18024 ChEBI	D-galacturonic acid	-	builds acid from	from API ID32E
68374	17634 ChEBI	D-glucose	-	builds acid from	from API ID32E
68374	16899 ChEBI	D-mannitol	-	builds acid from	from API ID32E
68374	30849 ChEBI	L-arabinose	-	builds acid from	from API ID32E
68374	18403 ChEBI	L-arabitol	-	builds acid from	from API ID32E
68374	62345 ChEBI	L-rhamnose	-	builds acid from	from API ID32E
68374	25094 ChEBI	lysine	-	degradation	from API ID32E
68374	15792 ChEBI	malonate	+	assimilation	from API ID32E
68374	17306 ChEBI	maltose	-	builds acid from	from API ID32E
68374	17268 ChEBI	myo-inositol	-	builds acid from	from API ID32E
68374	18257 ChEBI	ornithine	-	degradation	from API ID32E
68374	18394 ChEBI	palatinose	-	builds acid from	from API ID32E
68374	0 ChEBI	Potassium 5-ketogluconate	-	builds acid from	from API ID32E
68374	15963 ChEBI	ribitol	-	builds acid from	from API ID32E
68374	30911 ChEBI	sorbitol	-	builds acid from	from API ID32E
68374	17992 ChEBI	sucrose	-	builds acid from	from API ID32E
68374	27082 ChEBI	trehalose	-	builds acid from	from API ID32E
68374	27897 ChEBI	tryptophan	-	energy source	from API ID32E
68374	16199 ChEBI	urea	-	hydrolysis	from API ID32E

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68374	35581 ChEBI	indole		from API ID32E

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68374	35581 ChEBI	indole	-	from API ID32E

Enzymes

@ref	Value	Activity	Ec
68374	alpha-galactosidase	-	3.2.1.22	from API ID32E
68374	alpha-glucosidase	-	3.2.1.20	from API ID32E
68374	alpha-maltosidase	-		from API ID32E
68374	arginine dihydrolase	-	3.5.3.6	from API ID32E
68374	beta-galactosidase	-	3.2.1.23	from API ID32E
68374	beta-glucosidase	-	3.2.1.21	from API ID32E
68374	beta-glucuronidase	-	3.2.1.31	from API ID32E
68374	L-aspartate arylamidase	+	3.4.11.21	from API ID32E
68374	lipase	+		from API ID32E
68374	lysine decarboxylase	-	4.1.1.18	from API ID32E
68374	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API ID32E
68374	ornithine decarboxylase	-	4.1.1.17	from API ID32E
68374	urease	-	3.5.1.5	from API ID32E

API ID32E

@ref	ODC	ADH (Arg)	LDC (Lys)	URE	LARL	GAT	5KG	LipaseLIP	Phenol red (Acidification)RP	beta GLU	MAN	MAL	ADO	PLE	beta GUR	MNT	IND	N-Acetyl-beta-Glucosaminidasebeta NAG	beta GAL	GLU	SAC	LARA	DARL	alpha GLU	alpha GAL	TRE	RHA	INO	CEL	SOR	alpha-MaltosidasealphaMAL	L-aspartic acid arylamidaseAspA
44523	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body-Site	#Other	#Wound

Isolation

@ref	Sample type	Host species
44523	Human wound	Homo sapiens
67770	Wound

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	56089_D02 assembly for Alcaligenes faecalis subsp. faecalis NCTC10388	contig	GCA_900445215	32001.3	32001	75.25

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: 56089_D02 assembly for Alcaligenes faecalis subsp. faecalis NCTC10388
BV-BRC: 32001.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	97.05	no
125439	gram_stain	BacteriaNetⓘ	negative	96.66	no
125439	motility	BacteriaNetⓘ	yes	82.16	no
125439	spore_formation	BacteriaNetⓘ	no	90.52	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Alcaligenes faecalis subsp. faecalis strain NCTC10388
PATRIC: 32001.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	96.73	no
125438	anaerobic	anaerobicⓘ	no	96.78	no
125438	spore-forming	spore-formingⓘ	no	87.90	no
125438	aerobic	aerobicⓘ	yes	87.94	no
125438	thermophilic	thermophileⓘ	no	97.90	no
125438	flagellated	motile2+ⓘ	yes	83.51	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	An Alcaligenes strain emulates Bacillus thuringiensis producing a binary protein that kills corn rootworm through a mechanism similar to Cry34Ab1/Cry35Ab1.	Yalpani N, Altier D, Barry J, Kassa A, Nowatzki TM, Sethi A, Zhao JZ, Diehn S, Crane V, Sandahl G, Guan R, Poland B, Perez Ortega C, Nelson ME, Xie W, Liu L, Wu G.	Sci Rep	10.1038/s41598-017-03544-9	2017
Phylogeny	Identification of Gram-negative non-fermenters and oxidase-positive fermenters by the Oxi/Ferm tube.	Holmes B, Dowling J, Lapage SP.	J Clin Pathol	10.1136/jcp.32.1.78	1979

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#44523	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 2350
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68374	Automatically annotated from API ID32E .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Alcaligenes faecalis (CCUG 2350, ATCC 19209, NCTC 10388)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API ID32E

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_900445215

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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