Name: Lentibacillus sediminis 0W14
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 140768

Type strain:

Species: Lentibacillus sediminis

Strain Designation: 0W14

Culture col. no.: KCTC 33835, MCCC 1H00171

Strain history: <- Zongjun Du, Shandong Univ.

NCBI tax ID(s): 1940529 (species)

Special Collections

Section

Lentibacillus sediminis 0W14 is a facultative anaerobe, spore-forming, Gram-positive bacterium that was isolated from marine saltern.

Gram-positive
motile
rod-shaped
spore-forming
facultative anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Lentibacillus*
	Species	**Lentibacillus sediminis**
	Full Scientific Name (LPSN)	Lentibacillus sediminis Guo et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #43546]	Gram stain	positive
[Ref.: #67771]	Gram stain	positive

[Ref.: #43546]	Cell length	1.2-2.3 µm

[Ref.: #43546]	Cell width	0.4-0.6 µm

[Ref.: #43546]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #43546]	Motility	yes
[Ref.: #67771]	Motility	yes

[Ref.: #43546]	Flagellum arrangement	peritrichous
[Ref.: #67771]	Flagellum arrangement	peritrichous

[Ref.: #43546]	Colony color	cream to pink
[Ref.: #43546]	Incubation period	2 days
[Ref.: #43546]	Cultivation medium used	MA agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43546]

Culture medium

Marine agar (MA)

[Ref.: #43546]

Culture medium growth

		Temperature
[Ref.: #43546]	growth	16-45 °C
[Ref.: #43546]	optimum	37 °C
[Ref.: #67771]	growth	33-37 °C

	pH	Kind of pH		pH
[Ref.: #43546]			optimum	7.5
[Ref.: #43546]			growth	7-9.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43546]	Oxygen tolerance	facultative anaerobe
[Ref.: #67771]	Oxygen tolerance	facultative anaerobe

[Ref.: #43546]	Spore description	oval, subterminal; formed in swollen sporangia
[Ref.: #43546]	Type of spore	endospore
[Ref.: #43546]	Ability of spore formation	yes
[Ref.: #67771]	Type of spore	endospore
[Ref.: #67771]	Ability of spore formation	yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43546]		NaCl		growth	1-20	%(w/v)
[Ref.: #43546]		NaCl		optimum	6	%(w/v)

[Ref.: #67771]

Observation

quinones: MK-7

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43546]	3-O-methyl-D-glucose ChEBI	+	carbon source
[Ref.: #43546]	3-O-methyl-D-glucose ChEBI	+	oxidation
[Ref.: #43546]	acetoacetate ChEBI	+	carbon source
[Ref.: #43546]	acetoacetate ChEBI	+	oxidation
[Ref.: #43546]	alpha-D-glucose ChEBI	+	carbon source
[Ref.: #43546]	alpha-D-glucose ChEBI	+	oxidation
[Ref.: #43546]	carboxymethylcellulose ChEBI	-	hydrolysis
[Ref.: #43546]	cellobiose ChEBI	+	builds acid from
[Ref.: #43546]	cellobiose ChEBI	+	carbon source
[Ref.: #43546]	cellobiose ChEBI	+	oxidation
[Ref.: #43546]	citrate ChEBI	-	carbon source
[Ref.: #43546]	D-arabitol ChEBI	+	carbon source
[Ref.: #43546]	D-arabitol ChEBI	+	oxidation
[Ref.: #43546]	D-aspartate ChEBI	+	carbon source
[Ref.: #43546]	D-aspartate ChEBI	+	oxidation
[Ref.: #43546]	D-fructose ChEBI	+	builds acid from
[Ref.: #43546]	D-fructose ChEBI	+	carbon source
[Ref.: #43546]	D-fructose ChEBI	+	oxidation
[Ref.: #43546]	D-fucose ChEBI	+	carbon source
[Ref.: #43546]	D-fucose ChEBI	+	oxidation
[Ref.: #43546]	D-galactose ChEBI	+	builds acid from
[Ref.: #43546]	D-galactose ChEBI	+	carbon source
[Ref.: #43546]	D-galactose ChEBI	+	oxidation
[Ref.: #43546]	D-glucose ChEBI	+	builds acid from
[Ref.: #43546]	D-lyxose ChEBI	+	builds acid from
[Ref.: #43546]	D-mannitol ChEBI	+	builds acid from
[Ref.: #43546]	D-mannitol ChEBI	+	carbon source
[Ref.: #43546]	D-mannitol ChEBI	+	oxidation
[Ref.: #43546]	D-mannose ChEBI	+	builds acid from
[Ref.: #43546]	D-mannose ChEBI	+	carbon source
[Ref.: #43546]	D-mannose ChEBI	+	oxidation
[Ref.: #43546]	D-ribose ChEBI	+	builds acid from
[Ref.: #43546]	D-sorbitol ChEBI	+	carbon source
[Ref.: #43546]	D-sorbitol ChEBI	+	oxidation
[Ref.: #43546]	D-tagatose ChEBI	+	builds acid from
[Ref.: #43546]	dextrin ChEBI	+	carbon source
[Ref.: #43546]	dextrin ChEBI	+	oxidation
[Ref.: #43546]	formate ChEBI	+	carbon source
[Ref.: #43546]	formate ChEBI	+	oxidation
[Ref.: #43546]	gentiobiose ChEBI	+	carbon source
[Ref.: #43546]	gentiobiose ChEBI	+	oxidation
[Ref.: #43546]	glycerol ChEBI	+	carbon source
[Ref.: #43546]	glycerol ChEBI	+	oxidation
[Ref.: #43546]	inosine ChEBI	+	carbon source
[Ref.: #43546]	inosine ChEBI	+	oxidation
[Ref.: #43546]	L-fucose ChEBI	+	carbon source
[Ref.: #43546]	L-fucose ChEBI	+	oxidation
[Ref.: #43546]	L-rhamnose ChEBI	+	carbon source
[Ref.: #43546]	L-rhamnose ChEBI	+	oxidation
[Ref.: #43546]	L-serine ChEBI	+	carbon source
[Ref.: #43546]	L-serine ChEBI	+	oxidation
[Ref.: #43546]	L-sorbose ChEBI	+	builds acid from
[Ref.: #43546]	lactose ChEBI	+	carbon source
[Ref.: #43546]	lactose ChEBI	+	oxidation
[Ref.: #43546]	maltose ChEBI	+	builds acid from
[Ref.: #43546]	maltose ChEBI	+	carbon source
[Ref.: #43546]	maltose ChEBI	+	oxidation
[Ref.: #43546]	melibiose ChEBI	+	carbon source
[Ref.: #43546]	melibiose ChEBI	+	oxidation
[Ref.: #43546]	methyl D-glucoside ChEBI	+	carbon source
[Ref.: #43546]	methyl D-glucoside ChEBI	+	oxidation
[Ref.: #43546]	myo-inositol ChEBI	+	carbon source
[Ref.: #43546]	myo-inositol ChEBI	+	oxidation
[Ref.: #43546]	N-acetyl-beta-D-mannosamine ChEBI	+	carbon source
[Ref.: #43546]	N-acetyl-beta-D-mannosamine ChEBI	+	oxidation
[Ref.: #43546]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #43546]	N-acetylglucosamine ChEBI	+	oxidation
[Ref.: #43546]	nitrate ChEBI	+	reduction
[Ref.: #43546]	potassium 5-dehydro-D-gluconate	+	builds acid from
[Ref.: #43546]	propionate ChEBI	+	carbon source
[Ref.: #43546]	propionate ChEBI	+	oxidation
[Ref.: #43546]	raffinose ChEBI	+	carbon source
[Ref.: #43546]	raffinose ChEBI	+	oxidation
[Ref.: #43546]	salicin ChEBI	+	builds acid from
[Ref.: #43546]	salicin ChEBI	+	carbon source
[Ref.: #43546]	salicin ChEBI	+	oxidation
[Ref.: #43546]	stachyose ChEBI	+	carbon source
[Ref.: #43546]	stachyose ChEBI	+	oxidation
[Ref.: #43546]	starch ChEBI	-	hydrolysis
[Ref.: #43546]	sucrose ChEBI	+	builds acid from
[Ref.: #43546]	sucrose ChEBI	+	carbon source
[Ref.: #43546]	sucrose ChEBI	+	oxidation
[Ref.: #43546]	trehalose ChEBI	+	builds acid from
[Ref.: #43546]	trehalose ChEBI	+	carbon source
[Ref.: #43546]	trehalose ChEBI	+	oxidation
[Ref.: #43546]	turanose ChEBI	+	builds acid from
[Ref.: #43546]	turanose ChEBI	+	carbon source
[Ref.: #43546]	turanose ChEBI	+	oxidation
[Ref.: #43546]	tween 20 ChEBI	-	hydrolysis
[Ref.: #43546]	tween 40 ChEBI	+	carbon source
[Ref.: #43546]	tween 40 ChEBI	+	hydrolysis
[Ref.: #43546]	tween 40 ChEBI	+	oxidation
[Ref.: #43546]	tween 60 ChEBI	+	hydrolysis
[Ref.: #43546]	tween 80 ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #43546]	acetoin ChEBI	no
[Ref.: #43546]	hydrogen sulfide ChEBI	no
[Ref.: #43546]	indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Citrate test
[Ref.: #43546]		acetoin ChEBI	-
[Ref.: #43546]		citrate ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #43546]	acid phosphatase	-	3.1.3.2
[Ref.: #43546]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43546]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #43546]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43546]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43546]	alpha-glucosidase	-	3.2.1.20
[Ref.: #43546]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43546]	arginine dihydrolase	-	3.5.3.6
[Ref.: #43546]	beta-galactosidase	-	3.2.1.23
[Ref.: #43546]	beta-glucosidase	-	3.2.1.21
[Ref.: #43546]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43546]	catalase	+	1.11.1.6
[Ref.: #43546]	cystine arylamidase	-	3.4.11.3
[Ref.: #43546]	cytochrome oxidase	-	1.9.3.1
[Ref.: #43546]	esterase (C 4)	+
[Ref.: #43546]	esterase Lipase (C 8)	-
[Ref.: #43546]	gelatinase	+
[Ref.: #43546]	leucine arylamidase	-	3.4.11.1
[Ref.: #43546]	lipase (C 14)	-
[Ref.: #43546]	lysine decarboxylase	-	4.1.1.18
[Ref.: #43546]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #43546]	naphthol-AS-BI-phosphohydrolase	-
[Ref.: #43546]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #43546]	trypsin	-	3.4.21.4
[Ref.: #43546]	tryptophan deaminase	-	4.1.99.1
[Ref.: #43546]	valine arylamidase	-
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43546]

Fatty acid	Percentage
C18-1ω7c	69.5
11-methyl C18:1ω7c	25.5
C17:0	1.8
C18:0	1.5
C18:0	0.9
C16:1ω7c / C16:1ω6c	0.6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43546]	Sample type/isolated from	marine saltern
[Ref.: #43546]	Geographic location (country and/or sea, region)	Wendeng
[Ref.: #43546]	Country	China
[Ref.: #43546]	Country ISO 3 Code	CHN
[Ref.: #43546]	Continent	Asia
[Ref.: #43546]	Geographic location	36.9650°/122.0110°

[Ref.: #67771]	Sample type/isolated from	From marine saltern sediment
[Ref.: #67771]	Geographic location (country and/or sea, region)	Wendeng
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
[Ref.: #67771]	Geographic location	36.9657°/122.0110°
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Condition	#Saline	-
#Engineered	#Industrial	#Industrial production
#Environmental	#Terrestrial	#Coast

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KX815122 (>99% sequence identity) for Lentibacillus sediminis subclade from Microbeatlas

Aquatic Samples	89
Soil Samples	133
Animal Samples	214
Plant Samples	33
Total Samples	469

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43546]	Lentibacillus sediminis strain 0W14 16S ribosomal RNA gene, partial sequence	KX815122		GenBank ENA

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67771]	Lentibacillus sediminis 0W14	GCA_002763455	contig	GenBank ENA	1940529 tax ID
[Ref.: #66792]	Lentibacillus sediminis 0W14	2791354936	draft	JGI IMG/M	1940529 tax ID	*

[Ref.: #43546]	GC-content	44.8 mol%	genome sequence analysis
[Ref.: #67771]	GC-content	44.8 mol%

Availability in culture collections External links

[Ref.: #43546]

Culture collection no.

KCTC 33835, MCCC 1H00171

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Lentibacillus sediminis sp. nov., isolated from a marine saltern.	Guo LY, Wang NN, Wang XQ, Chen GJ, Du ZJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.002228	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43546

Ling-Yun Guo, Nan-Nan Wang, Xiao-Qun Wang, Guan-Jun Chen, Zong-Jun Du: Lentibacillus sediminis sp. nov., isolated from a marine saltern. IJSEM 67: 3946 - 3950 2017 ( DOI 10.1099/ijsem.0.002228 , PubMed 28895514 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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