Nocardia heshunensis (DSM 46764, JCM 30085, CFH S0067)

Name: Nocardia heshunensis (DSM 46764, JCM 30085, CFH S0067)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 140373

Type strain

Culture col. no. DSM 46764 JCM 30085 CFH S0067

NCBI tax ID(s) 2030913

Special Collections DSMZ JCM Literature strains

History DSMZ <- W.-J. Li, Yunnan Univ., Yunnan Inst. Microbiol. (YIM), Kunming, China; CFH S0067 <- Y. Duan, Henan Normal University, China JCM <-- W.-J. Li CFH S0067.

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Nocardia heshunensis DSM 46764 is an aerobe, Gram-positive, rod-shaped bacterium that was isolated from soil.

Gram-positive rod-shaped aerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 400258

JCM 30085,DSM 46764

@ref 20215

Last LPSN update 2026-05-29 08:39:42

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Nocardiaceae

Genus Nocardia

Species Nocardia heshunensis

Full scientific name Nocardia heshunensis Huang et al. 2017

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
43899	positive	rod-shaped
43899		coccus-shaped

Colony morphology

@ref	Colony color	Incubation period	Medium used
43899	light-orange	7 days	ISP 2 agar
43899	light yellowish pink	7 days	ISP 3 agar
43899	colourless	7 days	ISP 5 agar
43899	light orange	7 days	Potato-dextrose agar
43899	yellowish pink	7 days	ISP 4 agar
43899	light yellowish pink	7 days	Czapek's agar
43899	colourless	7 days	Nutrient agar

Pigmentation

@ref	Production	Name
43899		diffusible pigments

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
43899	Czapek's agar
43899	ISP 2 agar
43899	ISP 3 agar
43899	ISP 4 agar
43899	ISP 5 agar
43899	Potato-dextrose agar
42980	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
42980	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
43899	Nutrient agar (NA)

Culture temp

@ref	Growth	Type	Temperature (°C)
42980	positive	growth	28
43899	positive	growth	4-50
43899	positive	optimum	4-37
67770	positive	growth	28

Culture pH

@ref	Ability	Type	PH	PH range
43899	positive	optimum	4.0-7.0
43899	positive	growth	4.0-8.0	acidophile

Physiology and metabolism

Oxygen tolerance

43899

Oxygen toleranceaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
43899	NaCl	positive	growth	0-4 %(w/v)
43899	NaCl	positive	optimum	0-2 %(w/v)

Observation

@ref	Observation
43899	quinone MK-8
67770	quinones: MK-8(H₄, ω-cycl)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43899	17057 ChEBI	cellobiose	+	carbon source
43899	62968 ChEBI	cellulose	-	degradation
43899	15824 ChEBI	D-fructose	+	carbon source
43899	12936 ChEBI	D-galactose	+	carbon source
43899	17634 ChEBI	D-glucose	+	carbon source
43899	16899 ChEBI	D-mannitol	+	carbon source
43899	16024 ChEBI	D-mannose	+	carbon source
43899	16551 ChEBI	D-trehalose	-	carbon source
43899	65327 ChEBI	D-xylose	-	carbon source
43899	5291 ChEBI	gelatin	-	degradation
43899	17754 ChEBI	glycerol	+	carbon source
43899	15428 ChEBI	glycine	+	nitrogen source
43899	17368 ChEBI	hypoxanthine	+	nitrogen source
43899		L-alanine 4-nitroanilide	+	nitrogen source
43899	30849 ChEBI	L-arabinose	+	carbon source
43899	16467 ChEBI	L-arginine	-	nitrogen source
43899	17196 ChEBI	L-asparagine	-	nitrogen source
43899	16283 ChEBI	L-cystine	-	nitrogen source
43899	29985 ChEBI	L-glutamate	-	nitrogen source
43899	18019 ChEBI	L-lysine	-	nitrogen source
43899	15729 ChEBI	L-ornithine	+	nitrogen source
43899	17295 ChEBI	L-phenylalanine	-	nitrogen source
43899	62345 ChEBI	L-rhamnose	-	carbon source
43899	17115 ChEBI	L-serine	+	nitrogen source
43899	16857 ChEBI	L-threonine	-	nitrogen source
43899	17895 ChEBI	L-tyrosine	+	nitrogen source
43899	16414 ChEBI	L-valine	+	nitrogen source
43899	17716 ChEBI	lactose	-	carbon source
43899	17306 ChEBI	maltose	+	carbon source
43899	17268 ChEBI	myo-inositol	+	carbon source
43899	17632 ChEBI	nitrate	-	reduction
43899	16634 ChEBI	raffinose	-	carbon source
43899	33942 ChEBI	ribose	-	carbon source
43899	32954 ChEBI	sodium acetate	+	carbon source
43899	53258 ChEBI	sodium citrate	+	carbon source
43899	50144 ChEBI	sodium pyruvate	-	carbon source
43899	63675 ChEBI	sodium succinate	+	carbon source
43899	30911 ChEBI	sorbitol	+	carbon source
43899	27922 ChEBI	sorbose	-	carbon source
43899	28017 ChEBI	starch	-	degradation
43899	17992 ChEBI	sucrose	-	carbon source
43899	53424 ChEBI	tween 20	-	degradation
43899	53423 ChEBI	tween 40	-	degradation
43899	53425 ChEBI	tween 60	-	degradation
43899	53426 ChEBI	tween 80	-	degradation
43899	17151 ChEBI	xylitol	-	carbon source

Metabolite production

@ref	Chebi-ID	Metabolite	Production
43899	16136 ChEBI	hydrogen sulfide

Enzymes

@ref	Value	Activity	Ec
43899	catalase	+	1.11.1.6
43899	cytochrome oxidase	-	1.9.3.1
43899	urease	+	3.5.1.5

Fatty acid profile

Metadata FA analysis

@ref

43899

Fatty acid	Percentage
C16:0	33.4
C16:1ω7c / C16:1ω6c	21.3
C18:1ω9c	13.4
10-methyl C18:0	10.9
C19:0	6.8
C20:0	3.3
C14:0	2.5
C17:1ω8c	2.1
C17:1 iso ω9c / C16:0 10-methyl	1.1
C17:0	1
C18:0	0.8
10-methyl C17:0	0.8
C19:1ω11c / C19:1ω9c	0.6
C12:0	0.5
C13:0	0.4
C20:4ω6,9,12,15c	0.3
C16:0 iso	0.2
C15:1ω8c	0.2
C15:1ω5c	0.2
C17:1ω5c	0.1
C15:0 anteiso	0.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Enrichment culture	Enrichment culture composition	Enrichment culture duration	Enrichment culture temperature
42980	soil	Yunnan province, Tengchong, Heshun old town	China	CHN	Asia
43899	soil sample from Heshun old town , Tengchong, Yunnan province, south-west PR China	Heshun old town , Tengchong, Yunnan province	China	CHN	Asia	ISP 2 agar	supplemented with nalidixic acid 25 mg/L, nystatin 50 mg/L	2 weeks	28
67770	Soil from Heshun old town in Tengchong	Yunnan Province, south-west China	China	CHN	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
42980	1	Risk group (German classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
42980	Nocardia sp. strain CFH S0067 16S ribosomal RNA gene, partial sequence	KY039322	1541		1821

GC content

@ref	GC-content (mol%)	Method
42980	66.9	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Nocardia yunnanensis sp. nov., an actinomycete isolated from a soil sample.	Zhang JX, Ming H, Zhao ZL, Ji WL, Chang XL, Zhang LY, Cheng LJ, Meng XL, Li WJ, Nie GX	Int J Syst Evol Microbiol	10.1099/ijsem.0.003600	2019
Phylogeny	Nocardia heshunensis sp. nov., an actinomycete isolated from soil.	Huang JR, Ming H, Duan YY, Li S, Zhang LY, Ji WL, Zhao ZL, Meng XL, Li WJ, Nie GX	Int J Syst Evol Microbiol	10.1099/ijsem.0.002143	2017

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#42980	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46764
#43899	Jian-Rong Huang, Hong Ming, Yan-Yan Duan, Shuai Li, Ling-Yu Zhang, Wei-Li Ji, Zhuo-Li Zhao, Xiao-Lin Meng, Wen-Jun Li, Guo-Xing Nie: Nocardia heshunensis sp. nov., an actinomycete isolated from soil. IJSEM 67: 3467 - 3473 2017 ( DOI 10.1099/ijsem.0.002143 , PubMed 28875906 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Nocardia heshunensis (DSM 46764, JCM 30085, CFH S0067)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Observation

Metabolite utilization

Metabolite production

Enzymes

Fatty acid profile

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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