Name: Magnetospirillum sp. WD
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 139937

Type strain:

Species: Magnetospirillum sp.

Strain Designation: WD

Culture col. no.: DSM 21661

Strain history: <- J. D. Coates, Univ. of California, Berkeley, USA; WD <- U. Michaelidou {1999}

NCBI tax ID(s): 31872 (species)

SI-ID 398480

DSM 21661

Special Collections

DSMZ

Other strains from Magnetospirillum sp.

Section

Magnetospirillum sp. WD is a bacterium that was isolated from swine waste lagoon.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Rhodospirillaceae*
	Genus	*Magnetospirillum*
	Full Scientific Name (LPSN)	Magnetospirillum Schleifer et al. 1992

	Synonym	Phaeospirillum
	Synonym	Paramagnetospirillum

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42545]

Culture medium

FWM MEDIUM (PERCHLORATE) (DSMZ Medium 503b)

[Ref.: #42545]

Culture medium growth

[Ref.: #42545]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #42545]			growth	30 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42545]	Sample type/isolated from	swine waste lagoon
[Ref.: #42545]	Geographic location (country and/or sea, region)	Illinois, Southern Illinois University Agricultural Research Center, Carbondale Campus
[Ref.: #42545]	Country	USA
[Ref.: #42545]	Country ISO 3 Code	USA
[Ref.: #42545]	Continent	North America
* marker position based on {}

Isolation sources categories

#Engineered	#Waste	-
#Environmental	#Aquatic	-
#Host	#Mammals	#Suidae (Pig,Swine)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF170352 (>99% sequence identity) for Magnetospirillum bellicus subclade from Microbeatlas

Aquatic Samples	9
Soil Samples	2
Animal Samples
Plant Samples
Total Samples	11

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #42545]	Dechlorospirillum sp. WD 16S ribosomal RNA gene, complete sequence	AF170352	1472	GenBank ENA	100868 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Magnetospirillum sp. WD	2508501007	draft	JGI IMG/M	100868 tax ID	*

Availability in culture collections External links

[Ref.: #42545]

Culture collection no.

DSM 21661

[Ref.: #96367]

SI-ID 398480

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42545

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21661

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#96367

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398480.1 )

* These data were automatically processed and therefore are not curated

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