Name: Magnetospirillum sulfuroxidans J10
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132858

Type strain:

Species: Magnetospirillum sulfuroxidans

Strain Designation: J10

Culture col. no.: DSM 23205

Strain history: <- J. S. Geelhoed, Lab. Microbiology, Wageningen Univ., Netherlands; J10 (Magnetospirillum sulfuroxidans) <- J. S. Geelhoed {2003}

NCBI tax ID(s): 31872 (species)

Section

Magnetospirillum sulfuroxidans J10 is a mesophilic, motile bacterium that was isolated from freshwater sediment.

motile
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Rhodospirillaceae*
	Genus	*Magnetospirillum*
	Species	**Magnetospirillum sulfuroxidans**
	Full Scientific Name (LPSN)	Magnetospirillum sulfuroxidans Koziaeva et al. 2023

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %100

[Ref.: #69480]	Motility	yes Confidence in %96.469

Information on culture and growth conditions Culture and growth conditions

[Ref.: #24646]

Culture medium

MAGNETOSPIRILLUM MEDIUM (DSMZ Medium 380)

[Ref.: #24646]

Culture medium growth

[Ref.: #24646]

Culture medium link

Medium recipe at MediaDive

[Ref.: #24646]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24646]			growth	30 °C

[Ref.: #24646]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.665

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24646]	Sample type/isolated from	freshwater sediment
[Ref.: #24646]	Geographic location (country and/or sea, region)	Delft
[Ref.: #24646]	Country	Netherlands
[Ref.: #24646]	Country ISO 3 Code	NLD
[Ref.: #24646]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Sediment
#Environmental	#Aquatic	#Freshwater

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence FJ860937 (>99% sequence identity) for Magnetospirillum gryphiswaldense subclade from Microbeatlas

Aquatic Samples	5
Soil Samples
Animal Samples
Plant Samples
Total Samples	5

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24646]	Alpha proteobacterium J10 16S ribosomal RNA gene, partial sequence	FJ860937	1225	ENA	671855 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Magnetospirillum sulfuroxidans J10	GCA_018224925	scaffold	GenBank	611300 tax ID	*
[Ref.: #66792]	Magnetospirillum sp. J10	611300.3	wgs	PATRIC	611300 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Magnetospirillum sp. J10 PATRIC: 611300.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Magnetospirillum sp. J10 J10 NCBI: GCA_018224925.1
[Ref.: #69480]	flagellated	yes	83.68	no
[Ref.: #69480]	gram-positive	no	99.212	no
[Ref.: #69480]	anaerobic	no	89.955	no
[Ref.: #69480]	aerobic	no	86.176	no
[Ref.: #69480]	halophile	no	91.926	no
[Ref.: #69480]	spore-forming	no	88.578	no
[Ref.: #69480]	thermophile	no	94.6	no
[Ref.: #69480]	glucose-util	no	59.128	no
[Ref.: #69480]	motile	yes	91.3	no
[Ref.: #69480]	glucose-ferment	no	89.692	no

Availability in culture collections External links

[Ref.: #24646]

Culture collection no.

DSM 23205

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24646

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23205

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Magnetospirillum sp. J10

Magnetospirillum sp. J10 J10

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