Flavobacterium psychrophilum CIP 109953 is an obligate aerobe, psychrophilic, Gram-negative prokaryote of the family Flavobacteriaceae.
Gram-negative rod-shaped obligate aerobe psychrophilic genome sequence| @ref 20215 |
Last LPSN update
2025-12-16 10:03:22 |
| Domain Pseudomonadati |
| Phylum Bacteroidota |
| Class Flavobacteriia |
| Order Flavobacteriales |
| Family Flavobacteriaceae |
| Genus Flavobacterium |
| Species Flavobacterium psychrophilum |
| Full scientific name Flavobacterium psychrophilum (Bernardet and Grimont 1989 ex Borg 1960) Bernardet et al. 1996 |
| Synonyms (2) |
| 42069 | Oxygen toleranceobligate aerobe |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 42069 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 42069 | oxidase | + | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 42069 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | + | from API zym |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | |
|---|---|---|---|---|---|---|---|
| 124043 | JIP16_00 assembly for Flavobacterium psychrophilum JIP 16/00 | contig | GCA_900186515   | 96345.130  | 2879190428  | 96345 | |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Dual RNA-Seq of Flavobacterium psychrophilum and Its Outer Membrane Vesicles Distinguishes Genes Associated with Susceptibility to Bacterial Cold-Water Disease in Rainbow Trout (Oncorhynchus mykiss). | Chapagain P, Ali A, Salem M. | Pathogens | 10.3390/pathogens12030436 | 2023 | | |
| Metabolism | Identification of a Novel Elastin-Degrading Enzyme from the Fish Pathogen Flavobacterium psychrophilum. | Rochat T, Perez-Pascual D, Nilsen H, Carpentier M, Bridel S, Bernardet JF, Duchaud E. | Appl Environ Microbiol | 10.1128/aem.02535-18 | 2019 | |
| Genetics | Genomic Diversity and Evolution of the Fish Pathogen Flavobacterium psychrophilum. | Duchaud E, Rochat T, Habib C, Barbier P, Loux V, Guerin C, Dalsgaard I, Madsen L, Nilsen H, Sundell K, Wiklund T, Strepparava N, Wahli T, Caburlotto G, Manfrin A, Wiens GD, Fujiwara-Nagata E, Avendano-Herrera R, Bernardet JF, Nicolas P. | Front Microbiol | 10.3389/fmicb.2018.00138 | 2018 | |
| Phylogeny | Population structure of the fish-pathogenic bacterium Flavobacterium psychrophilum. | Nicolas P, Mondot S, Achaz G, Bouchenot C, Bernardet JF, Duchaud E. | Appl Environ Microbiol | 10.1128/aem.00244-08 | 2008 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive139581.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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